| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222150501
Identifier: 222150501
GI number: 222150501
Start: 252202
End: 253380
Strand: Direct
Name: 222150501
Synonym: MCCL_0251
Alternate gene names: NA
Gene position: 252202-253380 (Clockwise)
Preceding gene: 222150500
Following gene: 222150502
Centisome position: 12.0
GC content: 38.93
Gene sequence:
>1179_bases ATGAAGAAATATCAAGTAGTGATTCTCGGAGCAGGTGCAGGTGGGTTATCAAGTGCAAGCAGATTATTGAAGTCTGGTAT AAAGGATATCGCTATCATCGATCATGCAGATCAACATGCTTATCAGCCAGCTTGGCCTCTCGTTGGTTCAGGTGAAGAGA AGAAGACACGTACAGTAAAAAGCATGTCACGGGTAATCCCTAAAGCAATTGACCACATCCAGCAACGTGTTACTCGTATT CAGCCTGTAGAGCGTAAAGTGTATTTAGATAATGATGATTTTATTATGTACGAATATCTCGTCGTCGCACTTGGCATACA ATTAGACTTTCAGGAGATAGAGGGACTTGAAGCGACGCTAGGCAGAAATGGTGTTACGACAAACTACCTCTATGATTATA CAGATTATACCTATGAATTATTAAAGCAGACCAAGACAGGTAATGTGATAATAACGAAACCGAAATCAGTAATTAAAGGT GGAGTTTCTCCTGAAAATACATTGTTTACCTTTGATGAATTTATTCGTGATCAGAAAGATAATAAGGCACATCTTATTTT TAAATCAGGGAAGAACACTTTATTTCCAGTGGAAAAATATAGACGATATATGGAGAAACATTTAAATAATAAGCATATTG AATATCAACTCAATCAAGAATTGATTAAGGTAGACGGTGACAAGAAAGAGGCGACATTTAAAGAATGGGCTACAGGAGAA ACATATACATTACCTTTCTCTATGATTGTTGTCACGCCACCTATGAGTGCACCGGACGTTGTGAAAAGTTCGACCTTAAG CGATGAACAAGGGTGGCTGGATGTTAATCCATTTACGCTACAACATGTTCGTCATCAAAATGTATTCGGTATCGGAGACT GTACGAATTTACCAACCATAAAGATGGGAGCGGCAGTAAGGAAACAGATGCCCGTACTGGTCAGTAATCTACTTTCACAG ATAAAAGGCAAGCAGTTAAAAGCGCATTATGATGGCTCTACAGCTTGTCCAATAGCAACAGAATATGGTCAGGCTTTTAT AGCAGAATTTGGATATGATATGAAACCGAAGGAATCCATGCCGATAGATCAAGGGAAGACGAATCCGTTATTATATCAAG TGAAGAAACGTGGGATACCATTGATGTACTGGAATGCCCTGTTGAAAGGCAAAGCATAA
Upstream 100 bases:
>100_bases AGCTAAGATTTACACTCACCTTAAAGGTGAGTGTTTTTTTATTCATATCGTTAATTTAATAGGGTATATAATAACTAATA AACTTACTAGGAGGGAAACA
Downstream 100 bases:
>100_bases TATTGAACCGAAAGATGACATAGAGAACCGACTCTGCGAGACAGAGTTGGTTTTTAAATTTGTATAAAATTGTAAATTGA TATTTATTGTTGTCAGAAAA
Product: oxidoreductase family protein
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Oxidoreductase; Pyridine Nucleotide-Disulphide Oxidoreductase; SulfideQuinone Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; Twin-Arginine Translocation Pathway Signal; Sulfide Dehydrogenase Flavoprotein Subunit; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide-Quinone Reductase; Sulfide Quinone Oxidoreductase-Like Protein; Flavoprotein Reductase; Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Dehydrogenase; Sulfide Dehydrogenase Flavoprotein; Anti-Anti-Sigma Regulatory Factor; Filamentous Hemagglutinin; NAD(Fad)-Dependent Dehydrogenase Protein; Oxidoreductase Family Protein; Flavoprotein Reductase-Like Protein; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Oxidoreductase Pyridine Nucleotide-Disulphide Family; Pyridine Nucleotide-Disulphide Oxidoreductase Class-II; Sulfide-Quinone Oxidoreductase; NADH Dehydrogenase FAD-Containing Subunit; Sulfide Quinone-Rductase; Sulphide Quinone Reductase; Flavoprotein Reductase Conjectural; Oxidoreductase FAD-Dependent; Pyridine Nucleotide-Disulfide Family Oxidoreductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; SulfideQuinone Reductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family; NAD(FAD)-Dependent Dehydrogenase-Like Protein; Sulfide Dehydrogenase Related Protein
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MKKYQVVILGAGAGGLSSASRLLKSGIKDIAIIDHADQHAYQPAWPLVGSGEEKKTRTVKSMSRVIPKAIDHIQQRVTRI QPVERKVYLDNDDFIMYEYLVVALGIQLDFQEIEGLEATLGRNGVTTNYLYDYTDYTYELLKQTKTGNVIITKPKSVIKG GVSPENTLFTFDEFIRDQKDNKAHLIFKSGKNTLFPVEKYRRYMEKHLNNKHIEYQLNQELIKVDGDKKEATFKEWATGE TYTLPFSMIVVTPPMSAPDVVKSSTLSDEQGWLDVNPFTLQHVRHQNVFGIGDCTNLPTIKMGAAVRKQMPVLVSNLLSQ IKGKQLKAHYDGSTACPIATEYGQAFIAEFGYDMKPKESMPIDQGKTNPLLYQVKKRGIPLMYWNALLKGKA
Sequences:
>Translated_392_residues MKKYQVVILGAGAGGLSSASRLLKSGIKDIAIIDHADQHAYQPAWPLVGSGEEKKTRTVKSMSRVIPKAIDHIQQRVTRI QPVERKVYLDNDDFIMYEYLVVALGIQLDFQEIEGLEATLGRNGVTTNYLYDYTDYTYELLKQTKTGNVIITKPKSVIKG GVSPENTLFTFDEFIRDQKDNKAHLIFKSGKNTLFPVEKYRRYMEKHLNNKHIEYQLNQELIKVDGDKKEATFKEWATGE TYTLPFSMIVVTPPMSAPDVVKSSTLSDEQGWLDVNPFTLQHVRHQNVFGIGDCTNLPTIKMGAAVRKQMPVLVSNLLSQ IKGKQLKAHYDGSTACPIATEYGQAFIAEFGYDMKPKESMPIDQGKTNPLLYQVKKRGIPLMYWNALLKGKA >Mature_392_residues MKKYQVVILGAGAGGLSSASRLLKSGIKDIAIIDHADQHAYQPAWPLVGSGEEKKTRTVKSMSRVIPKAIDHIQQRVTRI QPVERKVYLDNDDFIMYEYLVVALGIQLDFQEIEGLEATLGRNGVTTNYLYDYTDYTYELLKQTKTGNVIITKPKSVIKG GVSPENTLFTFDEFIRDQKDNKAHLIFKSGKNTLFPVEKYRRYMEKHLNNKHIEYQLNQELIKVDGDKKEATFKEWATGE TYTLPFSMIVVTPPMSAPDVVKSSTLSDEQGWLDVNPFTLQHVRHQNVFGIGDCTNLPTIKMGAAVRKQMPVLVSNLLSQ IKGKQLKAHYDGSTACPIATEYGQAFIAEFGYDMKPKESMPIDQGKTNPLLYQVKKRGIPLMYWNALLKGKA
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI10864011, Length=390, Percent_Identity=37.6923076923077, Blast_Score=288, Evalue=4e-78, Organism=Caenorhabditis elegans, GI17539680, Length=429, Percent_Identity=29.6037296037296, Blast_Score=197, Evalue=8e-51, Organism=Caenorhabditis elegans, GI115534373, Length=337, Percent_Identity=32.3442136498516, Blast_Score=195, Evalue=3e-50, Organism=Drosophila melanogaster, GI24657386, Length=386, Percent_Identity=31.8652849740933, Blast_Score=215, Evalue=4e-56, Organism=Drosophila melanogaster, GI24657391, Length=386, Percent_Identity=31.8652849740933, Blast_Score=215, Evalue=4e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44262; Mature: 44262
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYQVVILGAGAGGLSSASRLLKSGIKDIAIIDHADQHAYQPAWPLVGSGEEKKTRTVK CCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH SMSRVIPKAIDHIQQRVTRIQPVERKVYLDNDDFIMYEYLVVALGIQLDFQEIEGLEATL HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCEEEHHHHCCHHHHH GRNGVTTNYLYDYTDYTYELLKQTKTGNVIITKPKSVIKGGVSPENTLFTFDEFIRDQKD CCCCCEECEEEECHHHHHHHHHHCCCCCEEEECCHHHHCCCCCCCCCEEEHHHHHCCCCC NKAHLIFKSGKNTLFPVEKYRRYMEKHLNNKHIEYQLNQELIKVDGDKKEATFKEWATGE CCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCEEEEECCCCCCCHHHHHCCCC TYTLPFSMIVVTPPMSAPDVVKSSTLSDEQGWLDVNPFTLQHVRHQNVFGIGDCTNLPTI EEEEEEEEEEEECCCCCCHHHHHCCCCCCCCEEECCCHHHHHHHHCCEEECCCCCCCCCC KMGAAVRKQMPVLVSNLLSQIKGKQLKAHYDGSTACPIATEYGQAFIAEFGYDMKPKESM HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC PIDQGKTNPLLYQVKKRGIPLMYWNALLKGKA CCCCCCCCCHHHHHHHCCCCEEEEHHHHCCCC >Mature Secondary Structure MKKYQVVILGAGAGGLSSASRLLKSGIKDIAIIDHADQHAYQPAWPLVGSGEEKKTRTVK CCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH SMSRVIPKAIDHIQQRVTRIQPVERKVYLDNDDFIMYEYLVVALGIQLDFQEIEGLEATL HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCEEEHHHHCCHHHHH GRNGVTTNYLYDYTDYTYELLKQTKTGNVIITKPKSVIKGGVSPENTLFTFDEFIRDQKD CCCCCEECEEEECHHHHHHHHHHCCCCCEEEECCHHHHCCCCCCCCCEEEHHHHHCCCCC NKAHLIFKSGKNTLFPVEKYRRYMEKHLNNKHIEYQLNQELIKVDGDKKEATFKEWATGE CCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCEEEEECCCCCCCHHHHHCCCC TYTLPFSMIVVTPPMSAPDVVKSSTLSDEQGWLDVNPFTLQHVRHQNVFGIGDCTNLPTI EEEEEEEEEEEECCCCCCHHHHHCCCCCCCCEEECCCHHHHHHHHCCEEECCCCCCCCCC KMGAAVRKQMPVLVSNLLSQIKGKQLKAHYDGSTACPIATEYGQAFIAEFGYDMKPKESM HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC PIDQGKTNPLLYQVKKRGIPLMYWNALLKGKA CCCCCCCCCHHHHHHHCCCCEEEEHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA