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The map label for this gene is ybjT [H]

Identifier: 222150500

GI number: 222150500

Start: 250674

End: 252107

Strand: Direct

Name: ybjT [H]

Synonym: MCCL_0250

Alternate gene names: 222150500

Gene position: 250674-252107 (Clockwise)

Preceding gene: 222150499

Following gene: 222150501

Centisome position: 11.92

GC content: 37.52

Gene sequence:

>1434_bases
ATGAAGGTACTATTAACAGGCGCTTCAGGTTATATCGGCGGAAATTTATTGGAACAATTGAAAGATGACTATGAAATTGT
AGCTGCTTCAAGAAGTACAGATAATAAAGAAGATGAAAAGAACGTAACATGGAAGAAAGTGGATCTTTATGCACTAGAGG
ATATTGAAGCAGCTATGGAAGGCGTGCATACGGCTATTTATCTCGTACACTCTATGATACCCTCTGCAAAGCTAACACAA
GGTTCATTTATGGATATGGATGCAATATTAGCAGATAACTTTGGCCGTGCGGCGAAGAACAAAGGCGTAAAACATATCAT
CTTTATGAGTGGAATTATGCCAGATGAAGAGGATGAGGACTTATCAAATCACTTATATAGTCGTAAAGAATGTGAGAAGA
TTCTGGGCTCTTACGGTGTTCCTGTATCGACATTACGTGCAGGGCTCATCATTGGACCAAAGGGTTCTTCATTCCCAATC
CTGAAGAAATTAACAAAACGATTGCCTGCGCTCGTGCTTCCGAAGTGGGCATATAGTAAAACAGCACCTGTCGCCTTAAA
AGATGTAGTTAAAGGATTAGCAACATTAGTTAAGCGCGAACCGAAACAAAATGAACAGATTGATATCTATCATGAAGTAA
CGGATTATAAAGGAATGTTTGAAGCTACTGCATCAGTAATGAAGAAGAAATTACCTATGCTTGATGTACCGTTCATTCCA
GTATGGATTACAAAGTTACCTGTCGCATTAATCACTGGTGAACCTAAGGAACTTGTTTATCCATTAATTGATAGTCTCGT
GCATGATATGACACCTTCTAAGAAGAATTATGTAGAAGGCATATCCAATGCACCGACACCGTTAAAAGAAAGTATTGAGA
CTGCTTTAAAAGATAGTGATAATGAGAAGAAAGATAAGAAAAAAGCACCTTCTATTGCGAAACAGCTCCAAAAGAATGAC
GTGAAGTCTGTTCAACGTATTACGATCCCTTCAAGCTGGACGATTGAGCAAACGGCAAACTATTATGTTAACTGGTTATC
ACGTATCGGTTACTCATTTATCAATACTTCGATTGAAGATGAAATATTGAATATTTCATTACCAATTTTTAAAGACCCTA
TCCTTATCCTGGAAAAATCACAAAAGAAATCATCAGAAGATAGGGTGTTGTTCTATATAAAAGGCGGTAAGTTTGCTAAG
GTAAACGAAAGCAGCAGAGCACGACTTGAATTCAGACGTATCCTTGATACGAATGAGTGTATAATTGCAATCCACGAATA
TGAACCATCGCTACCTTGGTTTGTATACACAATTACTCAAGCACGTGTGCATTTGTTAGTGATGAAACTCTTTGGGCTTG
AGACTAAGATTTTAGCGAAAACCTTGGATTCTAAGTATCTCGAAGATAAAACAATGACATTACAAGATAGCTAA

Upstream 100 bases:

>100_bases
CGAAAAGAAGAAGGTAGATGAAGAAGATTAAATTCACTATACCGGTTATAGAGGGATCAGATAGGGTGTGGACTAATACT
ATAGAATAGGGGGACTTTTG

Downstream 100 bases:

>100_bases
GATTTACACTCACCTTAAAGGTGAGTGTTTTTTTATTCATATCGTTAATTTAATAGGGTATATAATAACTAATAAACTTA
CTAGGAGGGAAACAATGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MKVLLTGASGYIGGNLLEQLKDDYEIVAASRSTDNKEDEKNVTWKKVDLYALEDIEAAMEGVHTAIYLVHSMIPSAKLTQ
GSFMDMDAILADNFGRAAKNKGVKHIIFMSGIMPDEEDEDLSNHLYSRKECEKILGSYGVPVSTLRAGLIIGPKGSSFPI
LKKLTKRLPALVLPKWAYSKTAPVALKDVVKGLATLVKREPKQNEQIDIYHEVTDYKGMFEATASVMKKKLPMLDVPFIP
VWITKLPVALITGEPKELVYPLIDSLVHDMTPSKKNYVEGISNAPTPLKESIETALKDSDNEKKDKKKAPSIAKQLQKND
VKSVQRITIPSSWTIEQTANYYVNWLSRIGYSFINTSIEDEILNISLPIFKDPILILEKSQKKSSEDRVLFYIKGGKFAK
VNESSRARLEFRRILDTNECIIAIHEYEPSLPWFVYTITQARVHLLVMKLFGLETKILAKTLDSKYLEDKTMTLQDS

Sequences:

>Translated_477_residues
MKVLLTGASGYIGGNLLEQLKDDYEIVAASRSTDNKEDEKNVTWKKVDLYALEDIEAAMEGVHTAIYLVHSMIPSAKLTQ
GSFMDMDAILADNFGRAAKNKGVKHIIFMSGIMPDEEDEDLSNHLYSRKECEKILGSYGVPVSTLRAGLIIGPKGSSFPI
LKKLTKRLPALVLPKWAYSKTAPVALKDVVKGLATLVKREPKQNEQIDIYHEVTDYKGMFEATASVMKKKLPMLDVPFIP
VWITKLPVALITGEPKELVYPLIDSLVHDMTPSKKNYVEGISNAPTPLKESIETALKDSDNEKKDKKKAPSIAKQLQKND
VKSVQRITIPSSWTIEQTANYYVNWLSRIGYSFINTSIEDEILNISLPIFKDPILILEKSQKKSSEDRVLFYIKGGKFAK
VNESSRARLEFRRILDTNECIIAIHEYEPSLPWFVYTITQARVHLLVMKLFGLETKILAKTLDSKYLEDKTMTLQDS
>Mature_477_residues
MKVLLTGASGYIGGNLLEQLKDDYEIVAASRSTDNKEDEKNVTWKKVDLYALEDIEAAMEGVHTAIYLVHSMIPSAKLTQ
GSFMDMDAILADNFGRAAKNKGVKHIIFMSGIMPDEEDEDLSNHLYSRKECEKILGSYGVPVSTLRAGLIIGPKGSSFPI
LKKLTKRLPALVLPKWAYSKTAPVALKDVVKGLATLVKREPKQNEQIDIYHEVTDYKGMFEATASVMKKKLPMLDVPFIP
VWITKLPVALITGEPKELVYPLIDSLVHDMTPSKKNYVEGISNAPTPLKESIETALKDSDNEKKDKKKAPSIAKQLQKND
VKSVQRITIPSSWTIEQTANYYVNWLSRIGYSFINTSIEDEILNISLPIFKDPILILEKSQKKSSEDRVLFYIKGGKFAK
VNESSRARLEFRRILDTNECIIAIHEYEPSLPWFVYTITQARVHLLVMKLFGLETKILAKTLDSKYLEDKTMTLQDS

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=303, Percent_Identity=29.042904290429, Blast_Score=135, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 53736; Mature: 53736

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLLTGASGYIGGNLLEQLKDDYEIVAASRSTDNKEDEKNVTWKKVDLYALEDIEAAME
CEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCCHHCCCCEEEEEEHHHHHHHHHHH
GVHTAIYLVHSMIPSAKLTQGSFMDMDAILADNFGRAAKNKGVKHIIFMSGIMPDEEDED
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHCCCCEEEEEEECCCCCCCCCH
LSNHLYSRKECEKILGSYGVPVSTLRAGLIIGPKGSSFPILKKLTKRLPALVLPKWAYSK
HHHHHHHHHHHHHHHHCCCCCHHHHCCCEEECCCCCCCHHHHHHHHHCCCEECCCCCCCC
TAPVALKDVVKGLATLVKREPKQNEQIDIYHEVTDYKGMFEATASVMKKKLPMLDVPFIP
CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
VWITKLPVALITGEPKELVYPLIDSLVHDMTPSKKNYVEGISNAPTPLKESIETALKDSD
HHHHHCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCC
NEKKDKKKAPSIAKQLQKNDVKSVQRITIPSSWTIEQTANYYVNWLSRIGYSFINTSIED
CHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
EILNISLPIFKDPILILEKSQKKSSEDRVLFYIKGGKFAKVNESSRARLEFRRILDTNEC
HHEEEECCCCCCCEEEEECCCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHCCCCCE
IIAIHEYEPSLPWFVYTITQARVHLLVMKLFGLETKILAKTLDSKYLEDKTMTLQDS
EEEEECCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCC
>Mature Secondary Structure
MKVLLTGASGYIGGNLLEQLKDDYEIVAASRSTDNKEDEKNVTWKKVDLYALEDIEAAME
CEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCCHHCCCCEEEEEEHHHHHHHHHHH
GVHTAIYLVHSMIPSAKLTQGSFMDMDAILADNFGRAAKNKGVKHIIFMSGIMPDEEDED
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHCCCCEEEEEEECCCCCCCCCH
LSNHLYSRKECEKILGSYGVPVSTLRAGLIIGPKGSSFPILKKLTKRLPALVLPKWAYSK
HHHHHHHHHHHHHHHHCCCCCHHHHCCCEEECCCCCCCHHHHHHHHHCCCEECCCCCCCC
TAPVALKDVVKGLATLVKREPKQNEQIDIYHEVTDYKGMFEATASVMKKKLPMLDVPFIP
CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
VWITKLPVALITGEPKELVYPLIDSLVHDMTPSKKNYVEGISNAPTPLKESIETALKDSD
HHHHHCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCC
NEKKDKKKAPSIAKQLQKNDVKSVQRITIPSSWTIEQTANYYVNWLSRIGYSFINTSIED
CHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
EILNISLPIFKDPILILEKSQKKSSEDRVLFYIKGGKFAKVNESSRARLEFRRILDTNEC
HHEEEECCCCCCCEEEEECCCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHCCCCCE
IIAIHEYEPSLPWFVYTITQARVHLLVMKLFGLETKILAKTLDSKYLEDKTMTLQDS
EEEEECCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]