| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is lutA
Identifier: 222150422
GI number: 222150422
Start: 178043
End: 178780
Strand: Direct
Name: lutA
Synonym: MCCL_0172
Alternate gene names: 222150422
Gene position: 178043-178780 (Clockwise)
Preceding gene: 222150421
Following gene: 222150423
Centisome position: 8.47
GC content: 39.16
Gene sequence:
>738_bases ATGAAAGTAAGCTTATTCAGTACGTGTTTAGTAGATGTATTCGAAAAACGTGTGGGTATTGCAACAGTGGAATTGTTAGA GAAACTAGGATGTGAAGTAGATTTCCCGGCAGCACAAGTATGTTGTGGGCAACCTGCTTATAACTCAGGGTATCACGAGG AAACGAAGAAAGCTGCGAAGAATATGATTAAAGCTTTCGAGCAATCAGAAGTTGTCGTTGCACCTTCAGGATCATGTGTA ACGATGTTTAAACATTATCCAGATCTATTCAAAAACGATGCAAAGTGGCAAGCACGTGCACAAGAACTTGCAGATAAAAC GTATGAAGTTACGCAGTTCATTGTAGAAGTGTTAGGTATTACAAATGTAGGAGCAAAACTTGATGGTGTAGCTACAATTC ATCCATCTTGCCATATGACACGTCTGTTAGGTAATGTGACTGCACCTGCTAAACTTCTGAACGAAGTAGAAGGACTAGAA GTTGTTGAATTACCTAAATACTACAATTGTTGTGGTTTCGGTGGAACATTTGCTGTTAAAATGAGCGATGTTTCAGGTGA AATGGTAGATGAAAAAGTAGATTGCATCGTTGAAAGTGGTGCAGACTATTTAGTTGGCGGAGACTGCAGTTGTTTGATGA ATATTGATGGTAGATTAAGACGTCGTGGTGTTGATGTGAAAGCTGTACATATCATTGAAATCTTAAATAACCAAGTTGAG GCGGTGACTACACGATGA
Upstream 100 bases:
>100_bases AAAAACGTTGCAATAGAATAGAACTATTGGTCACCGAGTCATATGATGACTGTTTAATTTTCAGCTGTGGGCACACTGAA AAAAATTGGGGGGTATAACT
Downstream 100 bases:
>100_bases GTATGAGAATAGGTAACGAAACGTTTAAGCAGGCAGTTAAGACGGAACTTAAAGATGACTTCATGCGTGGTGCTGTGAGT AGTGCACAAGATAGATTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MKVSLFSTCLVDVFEKRVGIATVELLEKLGCEVDFPAAQVCCGQPAYNSGYHEETKKAAKNMIKAFEQSEVVVAPSGSCV TMFKHYPDLFKNDAKWQARAQELADKTYEVTQFIVEVLGITNVGAKLDGVATIHPSCHMTRLLGNVTAPAKLLNEVEGLE VVELPKYYNCCGFGGTFAVKMSDVSGEMVDEKVDCIVESGADYLVGGDCSCLMNIDGRLRRRGVDVKAVHIIEILNNQVE AVTTR
Sequences:
>Translated_245_residues MKVSLFSTCLVDVFEKRVGIATVELLEKLGCEVDFPAAQVCCGQPAYNSGYHEETKKAAKNMIKAFEQSEVVVAPSGSCV TMFKHYPDLFKNDAKWQARAQELADKTYEVTQFIVEVLGITNVGAKLDGVATIHPSCHMTRLLGNVTAPAKLLNEVEGLE VVELPKYYNCCGFGGTFAVKMSDVSGEMVDEKVDCIVESGADYLVGGDCSCLMNIDGRLRRRGVDVKAVHIIEILNNQVE AVTTR >Mature_245_residues MKVSLFSTCLVDVFEKRVGIATVELLEKLGCEVDFPAAQVCCGQPAYNSGYHEETKKAAKNMIKAFEQSEVVVAPSGSCV TMFKHYPDLFKNDAKWQARAQELADKTYEVTQFIVEVLGITNVGAKLDGVATIHPSCHMTRLLGNVTAPAKLLNEVEGLE VVELPKYYNCCGFGGTFAVKMSDVSGEMVDEKVDCIVESGADYLVGGDCSCLMNIDGRLRRRGVDVKAVHIIEILNNQVE AVTTR
Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
COG id: COG0247
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lutA/ykgE family
Homologues:
Organism=Escherichia coli, GI1786497, Length=239, Percent_Identity=46.8619246861925, Blast_Score=233, Evalue=6e-63, Organism=Escherichia coli, GI48994913, Length=248, Percent_Identity=22.9838709677419, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1788576, Length=226, Percent_Identity=26.9911504424779, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LUTA_MACCJ (B9E9G8)
Other databases:
- EMBL: AP009484 - RefSeq: YP_002559575.1 - GeneID: 7390911 - GenomeReviews: AP009484_GR - KEGG: mcl:MCCL_0172 - OMA: GAYFPHR - HAMAP: MF_02105 - InterPro: IPR004017 - InterPro: IPR022822
Pfam domain/function: PF02754 CCG
EC number: NA
Molecular weight: Translated: 26767; Mature: 26767
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSLFSTCLVDVFEKRVGIATVELLEKLGCEVDFPAAQVCCGQPAYNSGYHEETKKAAK CCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHH NMIKAFEQSEVVVAPSGSCVTMFKHYPDLFKNDAKWQARAQELADKTYEVTQFIVEVLGI HHHHHHHCCCEEEECCCCEEHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TNVGAKLDGVATIHPSCHMTRLLGNVTAPAKLLNEVEGLEVVELPKYYNCCGFGGTFAVK CCCCCCCCCEEEECCCHHHHHHHHCCCHHHHHHHHHCCCEEEECCCHHCCCCCCCEEEEE MSDVSGEMVDEKVDCIVESGADYLVGGDCSCLMNIDGRLRRRGVDVKAVHIIEILNNQVE EECCCCHHHHHHHHHHHHCCCCEEECCCCEEEECCCHHHHHCCCCHHHHHHHHHHCCCHH AVTTR EEECC >Mature Secondary Structure MKVSLFSTCLVDVFEKRVGIATVELLEKLGCEVDFPAAQVCCGQPAYNSGYHEETKKAAK CCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHH NMIKAFEQSEVVVAPSGSCVTMFKHYPDLFKNDAKWQARAQELADKTYEVTQFIVEVLGI HHHHHHHCCCEEEECCCCEEHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TNVGAKLDGVATIHPSCHMTRLLGNVTAPAKLLNEVEGLEVVELPKYYNCCGFGGTFAVK CCCCCCCCCEEEECCCHHHHHHHHCCCHHHHHHHHHCCCEEEECCCHHCCCCCCCEEEEE MSDVSGEMVDEKVDCIVESGADYLVGGDCSCLMNIDGRLRRRGVDVKAVHIIEILNNQVE EECCCCHHHHHHHHHHHHCCCCEEECCCCEEEECCCHHHHHCCCCHHHHHHHHHHCCCHH AVTTR EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA