| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is nupG [H]
Identifier: 222150411
GI number: 222150411
Start: 165191
End: 166396
Strand: Direct
Name: nupG [H]
Synonym: MCCL_0161
Alternate gene names: 222150411
Gene position: 165191-166396 (Clockwise)
Preceding gene: 222150409
Following gene: 222150412
Centisome position: 7.86
GC content: 35.82
Gene sequence:
>1206_bases ATGAATACTTATTTAATATTGAACATTATTGGTATCTTAGTTTTTATTCTTGTTGCATTCTTGTTCTCTCGCGATAGAAA GAACATCAACTGGAAATCAGTCGTAATTATGTTAGTACTTAATTTATTTTTAGCTTGGTTCTTTACGCAATTCCCATACG GCAGAATTGGCGTTCAAAAAGTAGCGGATGCTTTTAGTTGGATGTTGCAAGCTGCATATGTTGGTATCGGAATGCCCTTT GCAAGCTTCACGGCACCTGGTCCTGGTAAGATGGATATGGCTGTTTCAGCTTTACTACCTATTCTTTTCGTAGTTCCTCT GTTTGATATTTTAATGTATATCGGAGTATTACCATTTATCATTAAATGGATGGGCTGGGTAATCGGTAAGGTTACAGGAC AACCGAAATTTGAGTCGTTTTATTCTATTGAAATGATGGTTTTAGGAAATACAGAAGCATTAGCGGTATCGAATGCGCAA GTAAAGCAAATGAACGAAGCGCGTGTCCTTACCATTGCATTAATGTCTATGAGCTGTATCTCAGGATCTATCGTTGGTGC ATATATTTCTATGATGCCTGGGGAATTGGTATTAACTGCAATTCCATTAAATATTATCAATGCTATTATTATCGCAACAA TCTTAAATCCTGTTAAGTTAACACCTGAAGAAGACTATGTTGTTGAAATTAAAGCTGAGACACGTCAGCCATTCTTCTCA TTCTTAGGAGATTCAGTACTTGGTGCAGGAAAGTTAATCTTAATTATTATTGCATTTTTAATCGCATTTGTCTCATTGGC ACATTTTATTGACATGATATTAGGACTATTCCCGGGTAATTTAACATTAAGTATTATCTTAGGATGGATAATGGCACCAT TTGCCATGCTTTTAGGCTTACCTTGGGCAGAAGCGAAAGTTGTCGGTGGTCATATGGCAACAAAGGTTATCACTAATGAA TTTGTTGTTATGCTGGGAGTTAAAGATCAACTGAAATCTTTCTCGCCGCATATGACAGCAGTACTTGTAACATTCTTGAT TTCATTCGCTAACTTCTCAACTATTGGTATGATTATTGGGACGTTAAAAGGAATTGTGAACGAAAAAACTTCTGATTTTG TAAGTAAATATGTACCGATGATGTTATTGTCAGGTATTCTAGTATCGTTACTATCTGCAGCGTTTGTTGGATTATTTACT TGGTAA
Upstream 100 bases:
>100_bases TTAATGAACAAATGTTCGTTTTTTATTGGAAAAAAGTGTGCTTAAAACAAAAAAACCATGGTATAATCATGAATGTAAAA TTTAATTAAAGGTGGAAAAG
Downstream 100 bases:
>100_bases GAAAATTTAGGGCTGAGACATTAAGTCTCAGTCCTTTTTTTATTTGTTTCTTTATGTTTAAGGATCTAATTATCGTAAAT ATATAAAGTAAAGCTTCTGC
Product: pyrimidine nucleoside transporter
Products: uridine [Cytoplasm]; thymidine [Cytoplasm]; inosine [Cytoplasm]; Deoxyuridine [Cytoplasm]; deoxyinosine [Cytoplasm]; deoxycytidine [Cytoplasm]; deoxyadenosine [Cytoplasm]; cytidine [Cytoplasm]; Proton [Cytoplasm]; adenosine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MNTYLILNIIGILVFILVAFLFSRDRKNINWKSVVIMLVLNLFLAWFFTQFPYGRIGVQKVADAFSWMLQAAYVGIGMPF ASFTAPGPGKMDMAVSALLPILFVVPLFDILMYIGVLPFIIKWMGWVIGKVTGQPKFESFYSIEMMVLGNTEALAVSNAQ VKQMNEARVLTIALMSMSCISGSIVGAYISMMPGELVLTAIPLNIINAIIIATILNPVKLTPEEDYVVEIKAETRQPFFS FLGDSVLGAGKLILIIIAFLIAFVSLAHFIDMILGLFPGNLTLSIILGWIMAPFAMLLGLPWAEAKVVGGHMATKVITNE FVVMLGVKDQLKSFSPHMTAVLVTFLISFANFSTIGMIIGTLKGIVNEKTSDFVSKYVPMMLLSGILVSLLSAAFVGLFT W
Sequences:
>Translated_401_residues MNTYLILNIIGILVFILVAFLFSRDRKNINWKSVVIMLVLNLFLAWFFTQFPYGRIGVQKVADAFSWMLQAAYVGIGMPF ASFTAPGPGKMDMAVSALLPILFVVPLFDILMYIGVLPFIIKWMGWVIGKVTGQPKFESFYSIEMMVLGNTEALAVSNAQ VKQMNEARVLTIALMSMSCISGSIVGAYISMMPGELVLTAIPLNIINAIIIATILNPVKLTPEEDYVVEIKAETRQPFFS FLGDSVLGAGKLILIIIAFLIAFVSLAHFIDMILGLFPGNLTLSIILGWIMAPFAMLLGLPWAEAKVVGGHMATKVITNE FVVMLGVKDQLKSFSPHMTAVLVTFLISFANFSTIGMIIGTLKGIVNEKTSDFVSKYVPMMLLSGILVSLLSAAFVGLFT W >Mature_401_residues MNTYLILNIIGILVFILVAFLFSRDRKNINWKSVVIMLVLNLFLAWFFTQFPYGRIGVQKVADAFSWMLQAAYVGIGMPF ASFTAPGPGKMDMAVSALLPILFVVPLFDILMYIGVLPFIIKWMGWVIGKVTGQPKFESFYSIEMMVLGNTEALAVSNAQ VKQMNEARVLTIALMSMSCISGSIVGAYISMMPGELVLTAIPLNIINAIIIATILNPVKLTPEEDYVVEIKAETRQPFFS FLGDSVLGAGKLILIIIAFLIAFVSLAHFIDMILGLFPGNLTLSIILGWIMAPFAMLLGLPWAEAKVVGGHMATKVITNE FVVMLGVKDQLKSFSPHMTAVLVTFLISFANFSTIGMIIGTLKGIVNEKTSDFVSKYVPMMLLSGILVSLLSAAFVGLFT W
Specific function: Involved in the uptake of the purine ribonucleosides inosine and guanosine [H]
COG id: COG1972
COG function: function code F; Nucleoside permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]
Homologues:
Organism=Homo sapiens, GI42542381, Length=426, Percent_Identity=25.1173708920188, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI11545853, Length=421, Percent_Identity=24.7030878859857, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI227116277, Length=425, Percent_Identity=23.5294117647059, Blast_Score=84, Evalue=3e-16, Organism=Escherichia coli, GI1788737, Length=394, Percent_Identity=34.010152284264, Blast_Score=218, Evalue=5e-58, Organism=Escherichia coli, GI1788488, Length=420, Percent_Identity=27.6190476190476, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1788485, Length=420, Percent_Identity=27.1428571428571, Blast_Score=121, Evalue=8e-29, Organism=Caenorhabditis elegans, GI71991794, Length=398, Percent_Identity=24.3718592964824, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17560276, Length=394, Percent_Identity=24.1116751269036, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI281360430, Length=413, Percent_Identity=23.9709443099274, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI45552517, Length=407, Percent_Identity=21.8673218673219, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI19921868, Length=407, Percent_Identity=21.8673218673219, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI45552519, Length=407, Percent_Identity=21.8673218673219, Blast_Score=91, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008276 - InterPro: IPR018270 - InterPro: IPR011657 - InterPro: IPR002668 [H]
Pfam domain/function: PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]
EC number: NA
Molecular weight: Translated: 43957; Mature: 43957
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTYLILNIIGILVFILVAFLFSRDRKNINWKSVVIMLVLNLFLAWFFTQFPYGRIGVQK CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH VADAFSWMLQAAYVGIGMPFASFTAPGPGKMDMAVSALLPILFVVPLFDILMYIGVLPFI HHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKWMGWVIGKVTGQPKFESFYSIEMMVLGNTEALAVSNAQVKQMNEARVLTIALMSMSCI HHHHHHHHHHCCCCCCCCHHEEEEEEEECCCCEEEECCHHHHHHCCHHHHHHHHHHHHHH SGSIVGAYISMMPGELVLTAIPLNIINAIIIATILNPVKLTPEEDYVVEIKAETRQPFFS CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHH FLGDSVLGAGKLILIIIAFLIAFVSLAHFIDMILGLFPGNLTLSIILGWIMAPFAMLLGL HHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC PWAEAKVVGGHMATKVITNEFVVMLGVKDQLKSFSPHMTAVLVTFLISFANFSTIGMIIG CCHHHHHHCHHHHHHHHHHHHEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH TLKGIVNEKTSDFVSKYVPMMLLSGILVSLLSAAFVGLFTW HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNTYLILNIIGILVFILVAFLFSRDRKNINWKSVVIMLVLNLFLAWFFTQFPYGRIGVQK CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH VADAFSWMLQAAYVGIGMPFASFTAPGPGKMDMAVSALLPILFVVPLFDILMYIGVLPFI HHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKWMGWVIGKVTGQPKFESFYSIEMMVLGNTEALAVSNAQVKQMNEARVLTIALMSMSCI HHHHHHHHHHCCCCCCCCHHEEEEEEEECCCCEEEECCHHHHHHCCHHHHHHHHHHHHHH SGSIVGAYISMMPGELVLTAIPLNIINAIIIATILNPVKLTPEEDYVVEIKAETRQPFFS CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHH FLGDSVLGAGKLILIIIAFLIAFVSLAHFIDMILGLFPGNLTLSIILGWIMAPFAMLLGL HHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC PWAEAKVVGGHMATKVITNEFVVMLGVKDQLKSFSPHMTAVLVTFLISFANFSTIGMIIG CCHHHHHHCHHHHHHHHHHHHEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH TLKGIVNEKTSDFVSKYVPMMLLSGILVSLLSAAFVGLFTW HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: uridine [Periplasm]; thymidine [Periplasm]; inosine [Periplasm]; Deoxyuridine [Periplasm]; deoxyinosine [Periplasm]; deoxycytidine [Periplasm]; deoxyadenosine [Periplasm]; cytidine [Periplasm]; Proton [Periplasm]; adenosine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + uridine [Periplasm] = Proton [Cytoplasm] + uridine [Cytoplasm] Proton [Periplasm] + thymidine [Periplasm] = Proton [Cytoplasm] + thymidine [Cytoplasm] Proton [Periplasm] + inosine [Periplasm] = Proton [Cytoplasm] + inosine [Cytoplasm]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]