| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is phnC [H]
Identifier: 222111205
GI number: 222111205
Start: 2151236
End: 2152069
Strand: Direct
Name: phnC [H]
Synonym: Dtpsy_2013
Alternate gene names: 222111205
Gene position: 2151236-2152069 (Clockwise)
Preceding gene: 222111204
Following gene: 222111206
Centisome position: 56.66
GC content: 75.18
Gene sequence:
>834_bases ATGAGCTTCGAGCTGAACGGCGTGGATCTATGCCACCCCGGCGGCCATGTGGCGCTGCGCGGCATCACCCTGGCCGCGCG CCAGGGCGAGAGCCTGGCGCTGATCGGCCCCTCGGGGGCGGGTAAGACCACCCTGCTGAACCTGCTGGGCACAGCCCTAC CCGCCAGCGCCGGCCGCGTGCACGTGCTGGGCTCCGCGCTGGGCGCTTCGTCGCCCGACACGCCCCATGCTTCGTGGCCT CCGCCGCGTGCGCTGCGCGCGCGCATCGGCACCGTGCACCAGGCCCCGCCCCTGCCGCCGCGCCAGCGCGTGGTGACCGC CGTGCTGGCCGGGCGCCTGGGCCAATGGCCCGCATGGAAGGCGCTGGCCTCGCTGCTGTACCCGGCCGACCTGCCGGGTG CGCACGCCGCGCTGCAGCGCGTGCAGTTGCAGGACAAGCTGTTCGCGCGCTGCGACCAGCTCTCGGGCGGGCAGCTGCAG CGCGTGGGCATTGCCCGCGTGCTGTACCAGCAGCCAGCGCTGCTGCTGGCCGACGAGCCCGTCTCTGCCCTCGACCCCAC GCTGGCGCTGGCCACCGTGCAGCTGCTGGTGCAGGACGCGGCCGCACGTGGCGCCACGCTGGTCGCCAGCCTGCACGCGG TGGACCTGGCGCTGGCCTGCTTTGCGCGCGTGGTGGGCCTGCGCGAGGGGCGCATCGCCTTCGACCTGCCGGCCGGCGCG GTCACGCCCGATCTGCTGCAGGCGCTGTACGCCCCGCCCGGCGACGGCGCGCTCCCGCCGGATGAAACGCCCACGCCGCC CCCGACCACCAGCAGCTACGCCTCATGCCGTTGA
Upstream 100 bases:
>100_bases TGGCCCAGGTAGCCCGCGCGTGCACCATTGGCGTTTTTGATCAAATCAGCCCCTAGCGCTTGCTGGATAAGCGCTAGCAG CTATTGAAACAAGAGCAACC
Downstream 100 bases:
>100_bases CGCCCCCTGCACCGCACCTGCGCGACCCGGCCGCACGCGGGCGGCTGGGCGGCGCGCTGCTGGCCGTGGTGCTGCTGTGG CCGCTGTTGCAGGCGTCGGG
Product: ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSFELNGVDLCHPGGHVALRGITLAARQGESLALIGPSGAGKTTLLNLLGTALPASAGRVHVLGSALGASSPDTPHASWP PPRALRARIGTVHQAPPLPPRQRVVTAVLAGRLGQWPAWKALASLLYPADLPGAHAALQRVQLQDKLFARCDQLSGGQLQ RVGIARVLYQQPALLLADEPVSALDPTLALATVQLLVQDAAARGATLVASLHAVDLALACFARVVGLREGRIAFDLPAGA VTPDLLQALYAPPGDGALPPDETPTPPPTTSSYASCR
Sequences:
>Translated_277_residues MSFELNGVDLCHPGGHVALRGITLAARQGESLALIGPSGAGKTTLLNLLGTALPASAGRVHVLGSALGASSPDTPHASWP PPRALRARIGTVHQAPPLPPRQRVVTAVLAGRLGQWPAWKALASLLYPADLPGAHAALQRVQLQDKLFARCDQLSGGQLQ RVGIARVLYQQPALLLADEPVSALDPTLALATVQLLVQDAAARGATLVASLHAVDLALACFARVVGLREGRIAFDLPAGA VTPDLLQALYAPPGDGALPPDETPTPPPTTSSYASCR >Mature_276_residues SFELNGVDLCHPGGHVALRGITLAARQGESLALIGPSGAGKTTLLNLLGTALPASAGRVHVLGSALGASSPDTPHASWPP PRALRARIGTVHQAPPLPPRQRVVTAVLAGRLGQWPAWKALASLLYPADLPGAHAALQRVQLQDKLFARCDQLSGGQLQR VGIARVLYQQPALLLADEPVSALDPTLALATVQLLVQDAAARGATLVASLHAVDLALACFARVVGLREGRIAFDLPAGAV TPDLLQALYAPPGDGALPPDETPTPPPTTSSYASCR
Specific function: Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system [H]
COG id: COG3638
COG function: function code P; ABC-type phosphate/phosphonate transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI42741659, Length=198, Percent_Identity=31.8181818181818, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI9961250, Length=196, Percent_Identity=32.6530612244898, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI4505771, Length=196, Percent_Identity=31.6326530612245, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI9961252, Length=196, Percent_Identity=31.6326530612245, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI9955963, Length=212, Percent_Identity=30.188679245283, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI21536376, Length=229, Percent_Identity=24.0174672489083, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1790544, Length=241, Percent_Identity=35.6846473029046, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1787089, Length=235, Percent_Identity=35.7446808510638, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1787029, Length=224, Percent_Identity=34.8214285714286, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1787370, Length=233, Percent_Identity=33.9055793991416, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1788225, Length=253, Percent_Identity=33.596837944664, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1786872, Length=209, Percent_Identity=32.0574162679426, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1786803, Length=238, Percent_Identity=30.2521008403361, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1786319, Length=227, Percent_Identity=28.6343612334802, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1787105, Length=239, Percent_Identity=32.6359832635983, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787500, Length=205, Percent_Identity=33.6585365853659, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1786253, Length=220, Percent_Identity=33.6363636363636, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1789672, Length=230, Percent_Identity=30.4347826086957, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1787712, Length=215, Percent_Identity=31.6279069767442, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1786345, Length=260, Percent_Identity=31.5384615384615, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786563, Length=217, Percent_Identity=34.5622119815668, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789032, Length=223, Percent_Identity=30.0448430493274, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI1789873, Length=230, Percent_Identity=32.1739130434783, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786703, Length=204, Percent_Identity=33.8235294117647, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI87081834, Length=219, Percent_Identity=30.5936073059361, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI87081791, Length=238, Percent_Identity=32.3529411764706, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787164, Length=232, Percent_Identity=32.3275862068966, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790739, Length=239, Percent_Identity=29.7071129707113, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1789962, Length=281, Percent_Identity=28.8256227758007, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1788450, Length=222, Percent_Identity=29.2792792792793, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788644, Length=242, Percent_Identity=30.9917355371901, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1789891, Length=229, Percent_Identity=31.0043668122271, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1790162, Length=257, Percent_Identity=28.4046692607004, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI1790190, Length=289, Percent_Identity=24.5674740484429, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787759, Length=210, Percent_Identity=29.5238095238095, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1790467, Length=229, Percent_Identity=27.9475982532751, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787112, Length=236, Percent_Identity=30.0847457627119, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1788506, Length=235, Percent_Identity=28.0851063829787, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI48994997, Length=209, Percent_Identity=30.1435406698565, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI1788761, Length=232, Percent_Identity=29.3103448275862, Blast_Score=64, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17541710, Length=212, Percent_Identity=31.1320754716981, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17558664, Length=200, Percent_Identity=31.5, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71992290, Length=234, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17567265, Length=199, Percent_Identity=32.1608040201005, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17567269, Length=199, Percent_Identity=32.1608040201005, Blast_Score=67, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6319856, Length=244, Percent_Identity=31.1475409836066, Blast_Score=63, Evalue=5e-11, Organism=Drosophila melanogaster, GI24653245, Length=198, Percent_Identity=29.7979797979798, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI281363262, Length=198, Percent_Identity=29.7979797979798, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI17136662, Length=198, Percent_Identity=31.3131313131313, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24659289, Length=210, Percent_Identity=29.0476190476191, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI85726357, Length=201, Percent_Identity=31.3432835820896, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24641565, Length=245, Percent_Identity=29.7959183673469, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR012693 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: =3.6.3.28 [H]
Molecular weight: Translated: 28589; Mature: 28458
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFELNGVDLCHPGGHVALRGITLAARQGESLALIGPSGAGKTTLLNLLGTALPASAGRV CCEECCCEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEE HVLGSALGASSPDTPHASWPPPRALRARIGTVHQAPPLPPRQRVVTAVLAGRLGQWPAWK EEEEHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH ALASLLYPADLPGAHAALQRVQLQDKLFARCDQLSGGQLQRVGIARVLYQQPALLLADEP HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCC VSALDPTLALATVQLLVQDAAARGATLVASLHAVDLALACFARVVGLREGRIAFDLPAGA HHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC VTPDLLQALYAPPGDGALPPDETPTPPPTTSSYASCR CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SFELNGVDLCHPGGHVALRGITLAARQGESLALIGPSGAGKTTLLNLLGTALPASAGRV CEECCCEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEE HVLGSALGASSPDTPHASWPPPRALRARIGTVHQAPPLPPRQRVVTAVLAGRLGQWPAWK EEEEHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH ALASLLYPADLPGAHAALQRVQLQDKLFARCDQLSGGQLQRVGIARVLYQQPALLLADEP HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCC VSALDPTLALATVQLLVQDAAARGATLVASLHAVDLALACFARVVGLREGRIAFDLPAGA HHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC VTPDLLQALYAPPGDGALPPDETPTPPPTTSSYASCR CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA