| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is ptxB [H]
Identifier: 222111204
GI number: 222111204
Start: 2150224
End: 2151114
Strand: Direct
Name: ptxB [H]
Synonym: Dtpsy_2012
Alternate gene names: 222111204
Gene position: 2150224-2151114 (Clockwise)
Preceding gene: 222111203
Following gene: 222111205
Centisome position: 56.64
GC content: 67.23
Gene sequence:
>891_bases ATGACCTCTTCAACGACCGCACGCCGTGCGGCGCTGCGCCGCTTTGCCGCAGCCGCCGCCGCTGTCGCCAGCTTCTCTCC CCTCCTGTCCACCCAGGCCGCCGAGCCGCAGGTGCTGCGCGTATCCGCCATCCCCGACGAAGCGCCTACCGAACTGCAAC GCAAGTTCAAGCCGCTGGGCGAATACCTGTCGCAGGCCACCGGAATGAAGGTGGTGTTCACCCCGGTAACCGACTACGCC GCCGTGGTCGAATCCCTGGCCACGCGCAAGCTGGACCTGGCCTGGCTGGGCGGCTTCACCTACGTGCAGGCGCGCATCCG CACGGGTGGTACGGCCATTCCGCTGGTGCAGCGGGAGGAGGACGCACGCTTTACCTCGCGCTTCATCACCGCCGACCCCA CCATCCAGGGCCTGGCCGACCTCAAGGGCAAGACCTTTGCCTTTGGCGCTCCCTCGTCCACCTCGGGCAGCCTGATGCCG CGCTACTTCCTGCAGCAAGCCGGCGTCCAGCCAGAGCGGGATTTCAAGACCGTGGCCTATTCCGGCGCGCATGACGCGAC CGTGGCCTTCGTGGCCGCTGGCAAGGCGCAGGCCGGCGTGCTCAACGCCTCCGTCTGGGACAAGCTGGTCGAGACCAAGA AGGTGGATCCGTCCAAGGTACGGGTGTTCGCCACCACCCCACCCTACTTCGACTACAACTGGACCGTGCGCGGCGATCTC GATCCCGCCGTGGTGCAGAAGATCAAGGCCGCCTTCCTGGCGCTCGACCCCGCCAAGCCCGAGCACAAGGCCATCCTGGA ACTGCAGCGCGCCTCGCGCTTCATCGCCACCGAGCCGCGCAACTACGACGGCATCGAAGACGCCGCCAAGACGGCCGGCC TGCTGAAGTAA
Upstream 100 bases:
>100_bases CCGGGCAGCCGGCGCCACCTTGGGCGACAATGGCGGCCCTCGCGCACACCCCGCAGGCCCTCGGCTTGCAGCGCGCTCGA TTCAACTTTCCCGCACCGCC
Downstream 100 bases:
>100_bases GCGCGCCGGCGCGCGCGGGCCTGGCCCAGGTAGCCCGCGCGTGCACCATTGGCGTTTTTGATCAAATCAGCCCCTAGCGC TTGCTGGATAAGCGCTAGCA
Product: phosphonate ABC transporter periplasmic phosphonate-binding protein
Products: 3-phospho-serine [Cytoplasm]; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTSSTTARRAALRRFAAAAAAVASFSPLLSTQAAEPQVLRVSAIPDEAPTELQRKFKPLGEYLSQATGMKVVFTPVTDYA AVVESLATRKLDLAWLGGFTYVQARIRTGGTAIPLVQREEDARFTSRFITADPTIQGLADLKGKTFAFGAPSSTSGSLMP RYFLQQAGVQPERDFKTVAYSGAHDATVAFVAAGKAQAGVLNASVWDKLVETKKVDPSKVRVFATTPPYFDYNWTVRGDL DPAVVQKIKAAFLALDPAKPEHKAILELQRASRFIATEPRNYDGIEDAAKTAGLLK
Sequences:
>Translated_296_residues MTSSTTARRAALRRFAAAAAAVASFSPLLSTQAAEPQVLRVSAIPDEAPTELQRKFKPLGEYLSQATGMKVVFTPVTDYA AVVESLATRKLDLAWLGGFTYVQARIRTGGTAIPLVQREEDARFTSRFITADPTIQGLADLKGKTFAFGAPSSTSGSLMP RYFLQQAGVQPERDFKTVAYSGAHDATVAFVAAGKAQAGVLNASVWDKLVETKKVDPSKVRVFATTPPYFDYNWTVRGDL DPAVVQKIKAAFLALDPAKPEHKAILELQRASRFIATEPRNYDGIEDAAKTAGLLK >Mature_295_residues TSSTTARRAALRRFAAAAAAVASFSPLLSTQAAEPQVLRVSAIPDEAPTELQRKFKPLGEYLSQATGMKVVFTPVTDYAA VVESLATRKLDLAWLGGFTYVQARIRTGGTAIPLVQREEDARFTSRFITADPTIQGLADLKGKTFAFGAPSSTSGSLMPR YFLQQAGVQPERDFKTVAYSGAHDATVAFVAAGKAQAGVLNASVWDKLVETKKVDPSKVRVFATTPPYFDYNWTVRGDLD PAVVQKIKAAFLALDPAKPEHKAILELQRASRFIATEPRNYDGIEDAAKTAGLLK
Specific function: Probably forms part of a binding-protein-dependent phosphite transporter. Required for oxidation of phosphite to phosphate [H]
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790543, Length=262, Percent_Identity=28.2442748091603, Blast_Score=75, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR005770 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 31973; Mature: 31842
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSTTARRAALRRFAAAAAAVASFSPLLSTQAAEPQVLRVSAIPDEAPTELQRKFKPLG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH EYLSQATGMKVVFTPVTDYAAVVESLATRKLDLAWLGGFTYVQARIRTGGTAIPLVQREE HHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCEEECCEEEEEEEECCCCCEECEEECCC DARFTSRFITADPTIQGLADLKGKTFAFGAPSSTSGSLMPRYFLQQAGVQPERDFKTVAY HHHHHHHEEECCCCHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCHHEEE SGAHDATVAFVAAGKAQAGVLNASVWDKLVETKKVDPSKVRVFATTPPYFDYNWTVRGDL CCCCCCEEEEEECCCCCCCEECHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEECCC DPAVVQKIKAAFLALDPAKPEHKAILELQRASRFIATEPRNYDGIEDAAKTAGLLK CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure TSSTTARRAALRRFAAAAAAVASFSPLLSTQAAEPQVLRVSAIPDEAPTELQRKFKPLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH EYLSQATGMKVVFTPVTDYAAVVESLATRKLDLAWLGGFTYVQARIRTGGTAIPLVQREE HHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCEEECCEEEEEEEECCCCCEECEEECCC DARFTSRFITADPTIQGLADLKGKTFAFGAPSSTSGSLMPRYFLQQAGVQPERDFKTVAY HHHHHHHEEECCCCHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCHHEEE SGAHDATVAFVAAGKAQAGVLNASVWDKLVETKKVDPSKVRVFATTPPYFDYNWTVRGDL CCCCCCEEEEEECCCCCCCEECHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEECCC DPAVVQKIKAAFLALDPAKPEHKAILELQRASRFIATEPRNYDGIEDAAKTAGLLK CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9791102 [H]