Click here to switch to the map view.

The map label for this gene is ydiK [C]

Identifier: 222111100

GI number: 222111100

Start: 2039510

End: 2040568

Strand: Direct

Name: ydiK [C]

Synonym: Dtpsy_1907

Alternate gene names: 222111100

Gene position: 2039510-2040568 (Clockwise)

Preceding gene: 222111094

Following gene: 222111104

Centisome position: 53.72

GC content: 68.56

Gene sequence:

>1059_bases
ATGAACCCGCCCACGCTCCAGTCCCGCACCCTGCTGCTCCTGCTCACCGTCGTGACGCTGGCCTTTGGCGCCATCCTCTG
GCCGCTCAACGGCGCCATCTTCTGGGGTGTGGTGCTCGCCATCCTGTTCACGCCGCTGCACCGGCGGCTGCAGCGGCGCA
TGCCGCGCAGGCGCAACCTGGCCGCGCTTGCCACCCTGGGCGTGTGCCTGGTGATCGTGATCCTGCCGGTCACGCTGATC
GGCGCTTCGCTGGTGCAGGAGGCCAGCGTGGCCTACGAGCGCGCCCGCTCGGGGCAGCTGAACTTCGGCGCCTACCTGCA
GCAGGTGCTGGCCGCGCTGCCCCCCTGGATGCTGGAGCTGCTGGACCGCTTTCACCTCACCACCCGCGCGGAGCTGCAAG
CCCGCCTGACCACGATCGGCGCCCAGGCCAGCCAGTTCCTGGCCACCAAGGCGCTGGACGTGGGCCAGAACACGCTGCAG
TTCGTGGTGAGCTTCGGCGTCATGCTCTACCTGTTGTTCTTCCTGCTGCGCGACGGCGCGCGGCTGGCGGCGCGCATCCG
CGAGGCCATCCCCCTGGATGCGCGGCACAAGGAGCAGTTGGCCATCAAGTTCACCACCGTGATCCGCGCCACCGTGAAGG
GCAACATCGTGGTGGCCGCCGCCCAGGGCGCCCTGGGTGGCCTGATCTTCTGGCTGTTGAACATCCAGGGGCCGGTGATG
TGGGGCGTGCTGATGGCGTTCCTGTCGCTGCTGCCCGCCGTGGGCGCCAGCCTGATCTGGGGGCCGGTGGCCATCTACTT
CCTGGCGACCGGCGCGCCGGGGCAGGCCGTGATCCTCACCGCCTATGGCGTATTCGTCATCGGGCTGGTGGACAACGTAC
TGCGTCCCGTGCTGGTCGGCAAGGACACCAAGCTGCCCGACTACGTGGTGCTGATCTCCACCTTGGGCGGCATGGCGTTG
TTCGGGCTCACGGGCTTTGTGATCGGCCCGATGATCGCCGCACTGTTCATCGCCACCTGGGACCTGTTCGCGCCGCACGA
CGGCTCAGAACGCTCCTGA

Upstream 100 bases:

>100_bases
CGCTATTGTGCCATTGAACGCCTGCGCGCGCGGCGAGCGGTGTATCAAGACAGGCGTGTGTGTGGCTTACATTTTGGGCT
TCGCTCCTTCCACCGCCCCC

Downstream 100 bases:

>100_bases
AATAGGAGCTACTAGCGCTTGATGGGCGGGCGCTGAAGGCCAAAACGCCTTCAACCCCGCCGACGCACTCATTCCGCCTC
AATACCGGCGGCCTTGATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MNPPTLQSRTLLLLLTVVTLAFGAILWPLNGAIFWGVVLAILFTPLHRRLQRRMPRRRNLAALATLGVCLVIVILPVTLI
GASLVQEASVAYERARSGQLNFGAYLQQVLAALPPWMLELLDRFHLTTRAELQARLTTIGAQASQFLATKALDVGQNTLQ
FVVSFGVMLYLLFFLLRDGARLAARIREAIPLDARHKEQLAIKFTTVIRATVKGNIVVAAAQGALGGLIFWLLNIQGPVM
WGVLMAFLSLLPAVGASLIWGPVAIYFLATGAPGQAVILTAYGVFVIGLVDNVLRPVLVGKDTKLPDYVVLISTLGGMAL
FGLTGFVIGPMIAALFIATWDLFAPHDGSERS

Sequences:

>Translated_352_residues
MNPPTLQSRTLLLLLTVVTLAFGAILWPLNGAIFWGVVLAILFTPLHRRLQRRMPRRRNLAALATLGVCLVIVILPVTLI
GASLVQEASVAYERARSGQLNFGAYLQQVLAALPPWMLELLDRFHLTTRAELQARLTTIGAQASQFLATKALDVGQNTLQ
FVVSFGVMLYLLFFLLRDGARLAARIREAIPLDARHKEQLAIKFTTVIRATVKGNIVVAAAQGALGGLIFWLLNIQGPVM
WGVLMAFLSLLPAVGASLIWGPVAIYFLATGAPGQAVILTAYGVFVIGLVDNVLRPVLVGKDTKLPDYVVLISTLGGMAL
FGLTGFVIGPMIAALFIATWDLFAPHDGSERS
>Mature_352_residues
MNPPTLQSRTLLLLLTVVTLAFGAILWPLNGAIFWGVVLAILFTPLHRRLQRRMPRRRNLAALATLGVCLVIVILPVTLI
GASLVQEASVAYERARSGQLNFGAYLQQVLAALPPWMLELLDRFHLTTRAELQARLTTIGAQASQFLATKALDVGQNTLQ
FVVSFGVMLYLLFFLLRDGARLAARIREAIPLDARHKEQLAIKFTTVIRATVKGNIVVAAAQGALGGLIFWLLNIQGPVM
WGVLMAFLSLLPAVGASLIWGPVAIYFLATGAPGQAVILTAYGVFVIGLVDNVLRPVLVGKDTKLPDYVVLISTLGGMAL
FGLTGFVIGPMIAALFIATWDLFAPHDGSERS

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=339, Percent_Identity=27.7286135693215, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38071; Mature: 38071

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPPTLQSRTLLLLLTVVTLAFGAILWPLNGAIFWGVVLAILFTPLHRRLQRRMPRRRNL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCH
AALATLGVCLVIVILPVTLIGASLVQEASVAYERARSGQLNFGAYLQQVLAALPPWMLEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHH
LDRFHLTTRAELQARLTTIGAQASQFLATKALDVGQNTLQFVVSFGVMLYLLFFLLRDGA
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCH
RLAARIREAIPLDARHKEQLAIKFTTVIRATVKGNIVVAAAQGALGGLIFWLLNIQGPVM
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCHHH
WGVLMAFLSLLPAVGASLIWGPVAIYFLATGAPGQAVILTAYGVFVIGLVDNVLRPVLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCC
KDTKLPDYVVLISTLGGMALFGLTGFVIGPMIAALFIATWDLFAPHDGSERS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNPPTLQSRTLLLLLTVVTLAFGAILWPLNGAIFWGVVLAILFTPLHRRLQRRMPRRRNL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCH
AALATLGVCLVIVILPVTLIGASLVQEASVAYERARSGQLNFGAYLQQVLAALPPWMLEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHH
LDRFHLTTRAELQARLTTIGAQASQFLATKALDVGQNTLQFVVSFGVMLYLLFFLLRDGA
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCH
RLAARIREAIPLDARHKEQLAIKFTTVIRATVKGNIVVAAAQGALGGLIFWLLNIQGPVM
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCHHH
WGVLMAFLSLLPAVGASLIWGPVAIYFLATGAPGQAVILTAYGVFVIGLVDNVLRPVLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCC
KDTKLPDYVVLISTLGGMALFGLTGFVIGPMIAALFIATWDLFAPHDGSERS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]