Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is 222110820

Identifier: 222110820

GI number: 222110820

Start: 1714599

End: 1715576

Strand: Direct

Name: 222110820

Synonym: Dtpsy_1625

Alternate gene names: NA

Gene position: 1714599-1715576 (Clockwise)

Preceding gene: 222110819

Following gene: 222110821

Centisome position: 45.16

GC content: 68.71

Gene sequence:

>978_bases
ATGAACCGCAAGACGATGTTGTCCATGCTGGCCTGCGCCCTGGGTGCCGCCGCTTTCGCCCCCGCGCATGCGCAGGAGGC
GTTTCCCTCCCGGCCCATCACGCTGGTGATTCCGTTCCCCGCGGGTGGAGCCACCGACGTGCTGGGCCGCCTGATCGGCA
AGAAGCTCGGCGACAAGCTGGGGCAAAGCGTGGTCATCGACAACCGCGCTGGCGCGGGCACGGTGATCGGCGCGAGCTAC
GTGGCCAAGGCCGCGCCGGACGGCTACACGCTGCTGCTGAGCTCAGGCACCACCTTCACGGTGAACCCGGCGGTGCGGCC
CCGGCTGCCGTATGACCCCGTCAAGAGCTTCGATCCCATCGGCATCACCGGGCGCACGGGGCTGATCCTGCTGGCCAGCA
AGAGCGTTCCGGTCAACGATGTGAAGCAGTTCGTCAGCGCCGTGAAGGCCGCGCCCGATAAGTATTCCTACGGCTCCTTC
GGCGCGGGCACGACCTCGCAGTTCGCGGGCGAGATGTTCTTTCATGCCGCGGGCCTGAAGATCCAGCACGTGCCCTACAA
AGGCAGCGCGCCGGCCATGGTGGACCTGATCGGCGGGCAGATTCCGTTCACCGTGGACACGGTGTCGGCCGCGCTGCCCC
AGCTCAAGGAGGGCAAGGTCAAGGCGATTGCCGTGACCACCGAGAAGCGCTCGACCCTGCTGCCCCAGGTACCCTCGCTG
GCCGAGAGCGGTTACCCCGGCCTGAACATGGACACCTGGCTGGCCCTGGTGGCGCCCGCAGGCCTGCCTGCCGCGGTGAA
GACGCGGCTGGAAAAGACGCTGGCCGAGGTGGTGGCCGACCCCGACACGCGCGAGCGCCTGCTCGCCCTGGGCTTTGAGC
CGGCATTCGCCTCGTCGGCCGAGCTGGCTGCCCTGATCGAGCGGGAGCTGCCGCTGATGCGTGCCATTGCCCAGCGCGCG
GGCATCACCGCCGACTGA

Upstream 100 bases:

>100_bases
TTCGAGGAACGTGGCCGGGCCCTGGGTTGACGCGCCTTCGCCGAGTCCTGGCCCCGCGAAAGGATCTGTTTTTTTAACTG
GCTTGACTGGAGAGAACGCC

Downstream 100 bases:

>100_bases
GGCGCGGCTCATCCACAATGGCCCCTGGACCTTCTTCACGACCATGACTGCTGATCCCACGCTGGTGGAACTGTCCGCCA
ATGAACTGCGCCACCGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MNRKTMLSMLACALGAAAFAPAHAQEAFPSRPITLVIPFPAGGATDVLGRLIGKKLGDKLGQSVVIDNRAGAGTVIGASY
VAKAAPDGYTLLLSSGTTFTVNPAVRPRLPYDPVKSFDPIGITGRTGLILLASKSVPVNDVKQFVSAVKAAPDKYSYGSF
GAGTTSQFAGEMFFHAAGLKIQHVPYKGSAPAMVDLIGGQIPFTVDTVSAALPQLKEGKVKAIAVTTEKRSTLLPQVPSL
AESGYPGLNMDTWLALVAPAGLPAAVKTRLEKTLAEVVADPDTRERLLALGFEPAFASSAELAALIERELPLMRAIAQRA
GITAD

Sequences:

>Translated_325_residues
MNRKTMLSMLACALGAAAFAPAHAQEAFPSRPITLVIPFPAGGATDVLGRLIGKKLGDKLGQSVVIDNRAGAGTVIGASY
VAKAAPDGYTLLLSSGTTFTVNPAVRPRLPYDPVKSFDPIGITGRTGLILLASKSVPVNDVKQFVSAVKAAPDKYSYGSF
GAGTTSQFAGEMFFHAAGLKIQHVPYKGSAPAMVDLIGGQIPFTVDTVSAALPQLKEGKVKAIAVTTEKRSTLLPQVPSL
AESGYPGLNMDTWLALVAPAGLPAAVKTRLEKTLAEVVADPDTRERLLALGFEPAFASSAELAALIERELPLMRAIAQRA
GITAD
>Mature_325_residues
MNRKTMLSMLACALGAAAFAPAHAQEAFPSRPITLVIPFPAGGATDVLGRLIGKKLGDKLGQSVVIDNRAGAGTVIGASY
VAKAAPDGYTLLLSSGTTFTVNPAVRPRLPYDPVKSFDPIGITGRTGLILLASKSVPVNDVKQFVSAVKAAPDKYSYGSF
GAGTTSQFAGEMFFHAAGLKIQHVPYKGSAPAMVDLIGGQIPFTVDTVSAALPQLKEGKVKAIAVTTEKRSTLLPQVPSL
AESGYPGLNMDTWLALVAPAGLPAAVKTRLEKTLAEVVADPDTRERLLALGFEPAFASSAELAALIERELPLMRAIAQRA
GITAD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 33810; Mature: 33810

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKTMLSMLACALGAAAFAPAHAQEAFPSRPITLVIPFPAGGATDVLGRLIGKKLGDKL
CCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
GQSVVIDNRAGAGTVIGASYVAKAAPDGYTLLLSSGTTFTVNPAVRPRLPYDPVKSFDPI
CCEEEEECCCCCCEEEHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCC
GITGRTGLILLASKSVPVNDVKQFVSAVKAAPDKYSYGSFGAGTTSQFAGEMFFHAAGLK
CCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCE
IQHVPYKGSAPAMVDLIGGQIPFTVDTVSAALPQLKEGKVKAIAVTTEKRSTLLPQVPSL
EEECCCCCCCCHHHHHHCCCCCEEHHHHHHHHCHHHCCCEEEEEEECCCHHHHCCCCHHH
AESGYPGLNMDTWLALVAPAGLPAAVKTRLEKTLAEVVADPDTRERLLALGFEPAFASSA
HHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHH
ELAALIERELPLMRAIAQRAGITAD
HHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNRKTMLSMLACALGAAAFAPAHAQEAFPSRPITLVIPFPAGGATDVLGRLIGKKLGDKL
CCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
GQSVVIDNRAGAGTVIGASYVAKAAPDGYTLLLSSGTTFTVNPAVRPRLPYDPVKSFDPI
CCEEEEECCCCCCEEEHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCC
GITGRTGLILLASKSVPVNDVKQFVSAVKAAPDKYSYGSFGAGTTSQFAGEMFFHAAGLK
CCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCE
IQHVPYKGSAPAMVDLIGGQIPFTVDTVSAALPQLKEGKVKAIAVTTEKRSTLLPQVPSL
EEECCCCCCCCHHHHHHCCCCCEEHHHHHHHHCHHHCCCEEEEEEECCCHHHHCCCCHHH
AESGYPGLNMDTWLALVAPAGLPAAVKTRLEKTLAEVVADPDTRERLLALGFEPAFASSA
HHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHH
ELAALIERELPLMRAIAQRAGITAD
HHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]