| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110820
Identifier: 222110820
GI number: 222110820
Start: 1714599
End: 1715576
Strand: Direct
Name: 222110820
Synonym: Dtpsy_1625
Alternate gene names: NA
Gene position: 1714599-1715576 (Clockwise)
Preceding gene: 222110819
Following gene: 222110821
Centisome position: 45.16
GC content: 68.71
Gene sequence:
>978_bases ATGAACCGCAAGACGATGTTGTCCATGCTGGCCTGCGCCCTGGGTGCCGCCGCTTTCGCCCCCGCGCATGCGCAGGAGGC GTTTCCCTCCCGGCCCATCACGCTGGTGATTCCGTTCCCCGCGGGTGGAGCCACCGACGTGCTGGGCCGCCTGATCGGCA AGAAGCTCGGCGACAAGCTGGGGCAAAGCGTGGTCATCGACAACCGCGCTGGCGCGGGCACGGTGATCGGCGCGAGCTAC GTGGCCAAGGCCGCGCCGGACGGCTACACGCTGCTGCTGAGCTCAGGCACCACCTTCACGGTGAACCCGGCGGTGCGGCC CCGGCTGCCGTATGACCCCGTCAAGAGCTTCGATCCCATCGGCATCACCGGGCGCACGGGGCTGATCCTGCTGGCCAGCA AGAGCGTTCCGGTCAACGATGTGAAGCAGTTCGTCAGCGCCGTGAAGGCCGCGCCCGATAAGTATTCCTACGGCTCCTTC GGCGCGGGCACGACCTCGCAGTTCGCGGGCGAGATGTTCTTTCATGCCGCGGGCCTGAAGATCCAGCACGTGCCCTACAA AGGCAGCGCGCCGGCCATGGTGGACCTGATCGGCGGGCAGATTCCGTTCACCGTGGACACGGTGTCGGCCGCGCTGCCCC AGCTCAAGGAGGGCAAGGTCAAGGCGATTGCCGTGACCACCGAGAAGCGCTCGACCCTGCTGCCCCAGGTACCCTCGCTG GCCGAGAGCGGTTACCCCGGCCTGAACATGGACACCTGGCTGGCCCTGGTGGCGCCCGCAGGCCTGCCTGCCGCGGTGAA GACGCGGCTGGAAAAGACGCTGGCCGAGGTGGTGGCCGACCCCGACACGCGCGAGCGCCTGCTCGCCCTGGGCTTTGAGC CGGCATTCGCCTCGTCGGCCGAGCTGGCTGCCCTGATCGAGCGGGAGCTGCCGCTGATGCGTGCCATTGCCCAGCGCGCG GGCATCACCGCCGACTGA
Upstream 100 bases:
>100_bases TTCGAGGAACGTGGCCGGGCCCTGGGTTGACGCGCCTTCGCCGAGTCCTGGCCCCGCGAAAGGATCTGTTTTTTTAACTG GCTTGACTGGAGAGAACGCC
Downstream 100 bases:
>100_bases GGCGCGGCTCATCCACAATGGCCCCTGGACCTTCTTCACGACCATGACTGCTGATCCCACGCTGGTGGAACTGTCCGCCA ATGAACTGCGCCACCGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MNRKTMLSMLACALGAAAFAPAHAQEAFPSRPITLVIPFPAGGATDVLGRLIGKKLGDKLGQSVVIDNRAGAGTVIGASY VAKAAPDGYTLLLSSGTTFTVNPAVRPRLPYDPVKSFDPIGITGRTGLILLASKSVPVNDVKQFVSAVKAAPDKYSYGSF GAGTTSQFAGEMFFHAAGLKIQHVPYKGSAPAMVDLIGGQIPFTVDTVSAALPQLKEGKVKAIAVTTEKRSTLLPQVPSL AESGYPGLNMDTWLALVAPAGLPAAVKTRLEKTLAEVVADPDTRERLLALGFEPAFASSAELAALIERELPLMRAIAQRA GITAD
Sequences:
>Translated_325_residues MNRKTMLSMLACALGAAAFAPAHAQEAFPSRPITLVIPFPAGGATDVLGRLIGKKLGDKLGQSVVIDNRAGAGTVIGASY VAKAAPDGYTLLLSSGTTFTVNPAVRPRLPYDPVKSFDPIGITGRTGLILLASKSVPVNDVKQFVSAVKAAPDKYSYGSF GAGTTSQFAGEMFFHAAGLKIQHVPYKGSAPAMVDLIGGQIPFTVDTVSAALPQLKEGKVKAIAVTTEKRSTLLPQVPSL AESGYPGLNMDTWLALVAPAGLPAAVKTRLEKTLAEVVADPDTRERLLALGFEPAFASSAELAALIERELPLMRAIAQRA GITAD >Mature_325_residues MNRKTMLSMLACALGAAAFAPAHAQEAFPSRPITLVIPFPAGGATDVLGRLIGKKLGDKLGQSVVIDNRAGAGTVIGASY VAKAAPDGYTLLLSSGTTFTVNPAVRPRLPYDPVKSFDPIGITGRTGLILLASKSVPVNDVKQFVSAVKAAPDKYSYGSF GAGTTSQFAGEMFFHAAGLKIQHVPYKGSAPAMVDLIGGQIPFTVDTVSAALPQLKEGKVKAIAVTTEKRSTLLPQVPSL AESGYPGLNMDTWLALVAPAGLPAAVKTRLEKTLAEVVADPDTRERLLALGFEPAFASSAELAALIERELPLMRAIAQRA GITAD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33810; Mature: 33810
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKTMLSMLACALGAAAFAPAHAQEAFPSRPITLVIPFPAGGATDVLGRLIGKKLGDKL CCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH GQSVVIDNRAGAGTVIGASYVAKAAPDGYTLLLSSGTTFTVNPAVRPRLPYDPVKSFDPI CCEEEEECCCCCCEEEHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCC GITGRTGLILLASKSVPVNDVKQFVSAVKAAPDKYSYGSFGAGTTSQFAGEMFFHAAGLK CCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCE IQHVPYKGSAPAMVDLIGGQIPFTVDTVSAALPQLKEGKVKAIAVTTEKRSTLLPQVPSL EEECCCCCCCCHHHHHHCCCCCEEHHHHHHHHCHHHCCCEEEEEEECCCHHHHCCCCHHH AESGYPGLNMDTWLALVAPAGLPAAVKTRLEKTLAEVVADPDTRERLLALGFEPAFASSA HHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHH ELAALIERELPLMRAIAQRAGITAD HHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNRKTMLSMLACALGAAAFAPAHAQEAFPSRPITLVIPFPAGGATDVLGRLIGKKLGDKL CCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH GQSVVIDNRAGAGTVIGASYVAKAAPDGYTLLLSSGTTFTVNPAVRPRLPYDPVKSFDPI CCEEEEECCCCCCEEEHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCC GITGRTGLILLASKSVPVNDVKQFVSAVKAAPDKYSYGSFGAGTTSQFAGEMFFHAAGLK CCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCE IQHVPYKGSAPAMVDLIGGQIPFTVDTVSAALPQLKEGKVKAIAVTTEKRSTLLPQVPSL EEECCCCCCCCHHHHHHCCCCCEEHHHHHHHHCHHHCCCEEEEEEECCCHHHHCCCCHHH AESGYPGLNMDTWLALVAPAGLPAAVKTRLEKTLAEVVADPDTRERLLALGFEPAFASSA HHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHH ELAALIERELPLMRAIAQRAGITAD HHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]