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The map label for this gene is yjbJ [H]

Identifier: 222110143

GI number: 222110143

Start: 950930

End: 951832

Strand: Direct

Name: yjbJ [H]

Synonym: Dtpsy_0929

Alternate gene names: 222110143

Gene position: 950930-951832 (Clockwise)

Preceding gene: 222110142

Following gene: 222110144

Centisome position: 25.05

GC content: 68.44

Gene sequence:

>903_bases
ATGACTGCGCGCCTGGGATACCGTATGCGTAACAGCCTTTTGGGGCTTTTGCGCACGGCTGGCATGTGCTGCGCGCTCCT
TTTTTTGCAGCAAACCGCGCATGCGGACCTGTGGGCCTTCGTGGACGAGCGCGGCGTGACGCATTTCGCCGCGCAGCAGC
TGGACGAGCGTTACGCGCTGTTCTTTCGCGGCAACGACTTCGACTCCGAGCGCGACGGCTCCAACACCGGACGTCAGGGT
GCGGCCGATGTCTCCACCGGGCCGGCCAGTCCCTCGGGGGCGCGGCTGCTGGCCTTCTTCGAGGTGTCGCACGACTACAA
GCTCGTGCGCCAGCACCTGCGCTCGGCGTCGGCGCGCCATGGCGTGGACTACGCGCTGCTGCAGGCGGTGATCGCCACCG
AGTCGGGTTTCAACACCCGTGCGGTTTCACCGCGCGGCGCCGTGGGGCTGATGCAGCTCATGCCCGCCACCGCCAGCCGC
TTCGGCGTGAGCGGCGACACCAGGCGCTCGGTGGAGCAAAAGCTGGTGGACCCCGCCACCAACGTGGCCGCGGGCACGCG
CTACCTGCGCTACCTCATGGATCTTTTCGAGGGCCGCCTGGACTTGGCGCTGGCAGCCTACAACGCGGGCGAGGGTGCCG
TGCAGCGCGCCGGCAACCGCGTGCCCGCCTACCGCGAGACGCGCAACTACGTACAGAGCGTGATGGGCCTGTATGCGCTG
CTCAAGCCGCCGCTACCGACGCGCAATCAGCGCGCGAACCCGGGGCGCGTGCGCATGGAACTGCCCGCCACGCCCCATTC
ACTATCCGATGCCGGTGAGCGCGCCGACACGCAGCGCATGTCCACGCCTGCGCCCACGCGCCTGGCCCGGCAGTCATCGA
CCGAGTCTGTCTTCACTGAATGA

Upstream 100 bases:

>100_bases
TCACCAAGCTCATGGGCAAGGGCGAGGCCGCCGCGCGCCGCGAGCTCATGGAGCTGCACGGCGACCTGGTGGATGTGGAC
ATCTGACGAAGGCACTCGCC

Downstream 100 bases:

>100_bases
GCGACCAACCCACTCTCGACTTCTCCGCGCCCGCCGACCACGGCGACAGCCTAGAACTGGCCGGCTACGCCCAGCGCGCC
TATCTGGAATACGCCCTCTC

Product: lytic transglycosylase subunit

Products: N-Acetylmuramic Acid Residues; N-Acetylglucosamine Residues [C]

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MTARLGYRMRNSLLGLLRTAGMCCALLFLQQTAHADLWAFVDERGVTHFAAQQLDERYALFFRGNDFDSERDGSNTGRQG
AADVSTGPASPSGARLLAFFEVSHDYKLVRQHLRSASARHGVDYALLQAVIATESGFNTRAVSPRGAVGLMQLMPATASR
FGVSGDTRRSVEQKLVDPATNVAAGTRYLRYLMDLFEGRLDLALAAYNAGEGAVQRAGNRVPAYRETRNYVQSVMGLYAL
LKPPLPTRNQRANPGRVRMELPATPHSLSDAGERADTQRMSTPAPTRLARQSSTESVFTE

Sequences:

>Translated_300_residues
MTARLGYRMRNSLLGLLRTAGMCCALLFLQQTAHADLWAFVDERGVTHFAAQQLDERYALFFRGNDFDSERDGSNTGRQG
AADVSTGPASPSGARLLAFFEVSHDYKLVRQHLRSASARHGVDYALLQAVIATESGFNTRAVSPRGAVGLMQLMPATASR
FGVSGDTRRSVEQKLVDPATNVAAGTRYLRYLMDLFEGRLDLALAAYNAGEGAVQRAGNRVPAYRETRNYVQSVMGLYAL
LKPPLPTRNQRANPGRVRMELPATPHSLSDAGERADTQRMSTPAPTRLARQSSTESVFTE
>Mature_299_residues
TARLGYRMRNSLLGLLRTAGMCCALLFLQQTAHADLWAFVDERGVTHFAAQQLDERYALFFRGNDFDSERDGSNTGRQGA
ADVSTGPASPSGARLLAFFEVSHDYKLVRQHLRSASARHGVDYALLQAVIATESGFNTRAVSPRGAVGLMQLMPATASRF
GVSGDTRRSVEQKLVDPATNVAAGTRYLRYLMDLFEGRLDLALAAYNAGEGAVQRAGNRVPAYRETRNYVQSVMGLYALL
KPPLPTRNQRANPGRVRMELPATPHSLSDAGERADTQRMSTPAPTRLARQSSTESVFTE

Specific function: Murein-Degrading Enzyme. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division (By Similarity). [C]

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

Organism=Escherichia coli, GI87082191, Length=117, Percent_Identity=40.1709401709402, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87082441, Length=129, Percent_Identity=37.2093023255814, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 32845; Mature: 32713

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARLGYRMRNSLLGLLRTAGMCCALLFLQQTAHADLWAFVDERGVTHFAAQQLDERYAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEE
FFRGNDFDSERDGSNTGRQGAADVSTGPASPSGARLLAFFEVSHDYKLVRQHLRSASARH
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHC
GVDYALLQAVIATESGFNTRAVSPRGAVGLMQLMPATASRFGVSGDTRRSVEQKLVDPAT
CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHH
NVAAGTRYLRYLMDLFEGRLDLALAAYNAGEGAVQRAGNRVPAYRETRNYVQSVMGLYAL
HHHHHHHHHHHHHHHHCCHHHHEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LKPPLPTRNQRANPGRVRMELPATPHSLSDAGERADTQRMSTPAPTRLARQSSTESVFTE
HCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHCCC
>Mature Secondary Structure 
TARLGYRMRNSLLGLLRTAGMCCALLFLQQTAHADLWAFVDERGVTHFAAQQLDERYAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEE
FFRGNDFDSERDGSNTGRQGAADVSTGPASPSGARLLAFFEVSHDYKLVRQHLRSASARH
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHC
GVDYALLQAVIATESGFNTRAVSPRGAVGLMQLMPATASRFGVSGDTRRSVEQKLVDPAT
CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHH
NVAAGTRYLRYLMDLFEGRLDLALAAYNAGEGAVQRAGNRVPAYRETRNYVQSVMGLYAL
HHHHHHHHHHHHHHHHCCHHHHEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LKPPLPTRNQRANPGRVRMELPATPHSLSDAGERADTQRMSTPAPTRLARQSSTESVFTE
HCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]