| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110043
Identifier: 222110043
GI number: 222110043
Start: 860011
End: 861993
Strand: Direct
Name: 222110043
Synonym: Dtpsy_0829
Alternate gene names: NA
Gene position: 860011-861993 (Clockwise)
Preceding gene: 222110042
Following gene: 222110044
Centisome position: 22.65
GC content: 66.41
Gene sequence:
>1983_bases GTGGGACCTTCATTCAACGAACAGTTTGACCAGCACGGCGCATGGAGGCGTGCTTTCGCCCAGCAGCTCAAGCGCCTGGG GCAATGGATGGGTTCGCACGACCTCATGGACGCGGCTGTGGAGGAGCGTCTGCAGCGGCTGGAAGAGCAGGTGCGCAGCG ACAAGGTGACCGTGGCTTTTGTGGCGGAGTTTTCGCGCGGCAAGTCCGAGCTCATCAATGCGATCTTCTTCGCCGGCTAT GGCCGGCGCATCATGCCGGCCAGTGCGGGGCGCACCACCATGTGTCCGACCGAGCTGGGCTATGAAAACGGCACCGCCCC CAGCCTGCGCCTGCTGCCTATCGACACGCGCATGCAGTCCCTGGGGCTGGCCGAGTGGCGCCTGAAGGCAGACCGCTGGG TGAAGGTGCCGCTGGACATGGACGACCCGGCCCAACTCGCCCAGGCGCTTGAAAAAGTATCGGAAGTGCGCCGCGTGTCC GTGGACGAGGCGCGTGCGCTGGGTTTCTGGAGCGATGAGGCCGCCGACGAGAACCCCGTGCTGGACGCTGCCGGCATGGT CGAGGTGCCAATGTGGCGGCACGCGGTCATCAACATTCCGCATCCGCTGCTCAAGCAGGGGCTCGTGATTCTGGATACGC CGGGCCTGAACGCAGTGGGCGCGGAGCCCGAGCTCACCATCAACCTCATCCCGCAGGCCCACGCCGTGGTGTTCATCCTG GGCGCGGACACGGGCGTGACGCGCTCGGACCTGACCATCTGGCGCGACCACCTGGGCACGGCTGAAGACGCGACCGATGC GCGGCTGGTGGTACTCAACAAGATCGACACGCTGTGGGACACGCTCAGTTCCCCGTCGCAAGTGCAAGCACAGCTGGAGC GCCAGCGCCAGACATCGGCCGAATTGCTGGGCGTGCCGCTCAGCCATGTCGTGCCCGTGTCGGCCCAGAAGGGCCTGGTG GCCAAGATCAACTGTGATGACATCCTGCTGGAGTCCAGTGGGCTGCCGCTGCTGGAGGAAGCGCTGGCCGAGGGCATCAT GGGCCGGCGCCAGGCCATCCTGCGGGCCACGGTGGCCAGCGGCGTGGCAAGCCTGCAGTCCGAGACGCGGCGGGTGATCA ACATCCGCCGGCGCGATCTGGATGATCAGATGCTGGAGTTGCGCAGCCTGCGCGGCAAGAATGCCTCGGTGATCGACGCC ATGCGCGGGCGCATCGAGCAGGAGCAGCAGGAGTTTGAAGCCAGCACGGCCAAGATTCAGGCCGTGCGGGCAGTGCACCT GAAGATGCTGCGCGAGGTGTTCCACCAGCTTGGGCCGCGTTCGCTCAAGGCGCAACTGGTGGAGCTCACCGAGGCGCTGC AGCCCAAAGGGCTCAAGCTGGGCGTGCGCAAGGTATATGGCGACACCTTCGCCAAGGTGCGCACCATCATGGAGGCCGCG CAGTCCACGGGCATCGAGATCCAGGCCATGCTGGGCGGCACCTTCCGCCAGCTCAACACGGAGTTCGGCTTCTCGTTGCA AGTACCTGCGGCGCCCCAATTGGGTAACTATGTGCAGGAGATCGTGGCAATCGAGCAGCGGCACCTGCAATACGTGGGCA TGGGCAACACGCTGCGCCTGGCGCAGCCGGAGTTCGCGCAGCGCCTGTTGCGGGCCATGGGCCTGCGCCTGCGCACCGTG TTCGAGTCCGCGGCCAACGAGCTGGAGCTGTGGAGCAAGACGGCCACGGCGCAGTTGGACGCGCAACTGCGTGAGCGCAA GCGCAGCTTCTCGCGGCGCATCGAGGCGGTGAACCGCATCCAGCAGGCCGCCAACGGGCTGGTGGACCGCATCGCCGAGA TCGAAGAGGCCGAGCAGCACCTCGCCGAACTGGAGCAGCGGCTGACCGAGCTGACCTCCGACCTCGTGCGGCAGCCGCAA GCGCCTGAGGGCGTGGACATCGACATACCCCTTACCGAACCCCAGCCGCTCGCGGCGTCATGA
Upstream 100 bases:
>100_bases CGCCTGACCGGGCTGCCTGGCGGCGGACCGGCGCAATGGCGATGCTATATTGCGCCATCTCCCGCCCACGCGGGCGCTTG CATTGATATCCGGGAGCAAA
Downstream 100 bases:
>100_bases GCGGTCCGTCCGCAGAGCTGGCGACCCAGGTGGTGCGCTGGCAGGCAGCGCATGGGCGCAACCACCTGCCTTGGCAGAAC ACGCGCGATGCATACCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 660; Mature: 659
Protein sequence:
>660_residues MGPSFNEQFDQHGAWRRAFAQQLKRLGQWMGSHDLMDAAVEERLQRLEEQVRSDKVTVAFVAEFSRGKSELINAIFFAGY GRRIMPASAGRTTMCPTELGYENGTAPSLRLLPIDTRMQSLGLAEWRLKADRWVKVPLDMDDPAQLAQALEKVSEVRRVS VDEARALGFWSDEAADENPVLDAAGMVEVPMWRHAVINIPHPLLKQGLVILDTPGLNAVGAEPELTINLIPQAHAVVFIL GADTGVTRSDLTIWRDHLGTAEDATDARLVVLNKIDTLWDTLSSPSQVQAQLERQRQTSAELLGVPLSHVVPVSAQKGLV AKINCDDILLESSGLPLLEEALAEGIMGRRQAILRATVASGVASLQSETRRVINIRRRDLDDQMLELRSLRGKNASVIDA MRGRIEQEQQEFEASTAKIQAVRAVHLKMLREVFHQLGPRSLKAQLVELTEALQPKGLKLGVRKVYGDTFAKVRTIMEAA QSTGIEIQAMLGGTFRQLNTEFGFSLQVPAAPQLGNYVQEIVAIEQRHLQYVGMGNTLRLAQPEFAQRLLRAMGLRLRTV FESAANELELWSKTATAQLDAQLRERKRSFSRRIEAVNRIQQAANGLVDRIAEIEEAEQHLAELEQRLTELTSDLVRQPQ APEGVDIDIPLTEPQPLAAS
Sequences:
>Translated_660_residues MGPSFNEQFDQHGAWRRAFAQQLKRLGQWMGSHDLMDAAVEERLQRLEEQVRSDKVTVAFVAEFSRGKSELINAIFFAGY GRRIMPASAGRTTMCPTELGYENGTAPSLRLLPIDTRMQSLGLAEWRLKADRWVKVPLDMDDPAQLAQALEKVSEVRRVS VDEARALGFWSDEAADENPVLDAAGMVEVPMWRHAVINIPHPLLKQGLVILDTPGLNAVGAEPELTINLIPQAHAVVFIL GADTGVTRSDLTIWRDHLGTAEDATDARLVVLNKIDTLWDTLSSPSQVQAQLERQRQTSAELLGVPLSHVVPVSAQKGLV AKINCDDILLESSGLPLLEEALAEGIMGRRQAILRATVASGVASLQSETRRVINIRRRDLDDQMLELRSLRGKNASVIDA MRGRIEQEQQEFEASTAKIQAVRAVHLKMLREVFHQLGPRSLKAQLVELTEALQPKGLKLGVRKVYGDTFAKVRTIMEAA QSTGIEIQAMLGGTFRQLNTEFGFSLQVPAAPQLGNYVQEIVAIEQRHLQYVGMGNTLRLAQPEFAQRLLRAMGLRLRTV FESAANELELWSKTATAQLDAQLRERKRSFSRRIEAVNRIQQAANGLVDRIAEIEEAEQHLAELEQRLTELTSDLVRQPQ APEGVDIDIPLTEPQPLAAS >Mature_659_residues GPSFNEQFDQHGAWRRAFAQQLKRLGQWMGSHDLMDAAVEERLQRLEEQVRSDKVTVAFVAEFSRGKSELINAIFFAGYG RRIMPASAGRTTMCPTELGYENGTAPSLRLLPIDTRMQSLGLAEWRLKADRWVKVPLDMDDPAQLAQALEKVSEVRRVSV DEARALGFWSDEAADENPVLDAAGMVEVPMWRHAVINIPHPLLKQGLVILDTPGLNAVGAEPELTINLIPQAHAVVFILG ADTGVTRSDLTIWRDHLGTAEDATDARLVVLNKIDTLWDTLSSPSQVQAQLERQRQTSAELLGVPLSHVVPVSAQKGLVA KINCDDILLESSGLPLLEEALAEGIMGRRQAILRATVASGVASLQSETRRVINIRRRDLDDQMLELRSLRGKNASVIDAM RGRIEQEQQEFEASTAKIQAVRAVHLKMLREVFHQLGPRSLKAQLVELTEALQPKGLKLGVRKVYGDTFAKVRTIMEAAQ STGIEIQAMLGGTFRQLNTEFGFSLQVPAAPQLGNYVQEIVAIEQRHLQYVGMGNTLRLAQPEFAQRLLRAMGLRLRTVF ESAANELELWSKTATAQLDAQLRERKRSFSRRIEAVNRIQQAANGLVDRIAEIEEAEQHLAELEQRLTELTSDLVRQPQA PEGVDIDIPLTEPQPLAAS
Specific function: Unknown
COG id: COG0699
COG function: function code R; Predicted GTPases (dynamin-related)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73294; Mature: 73163
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPSFNEQFDQHGAWRRAFAQQLKRLGQWMGSHDLMDAAVEERLQRLEEQVRSDKVTVAF CCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE VAEFSRGKSELINAIFFAGYGRRIMPASAGRTTMCPTELGYENGTAPSLRLLPIDTRMQS HHHHHCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHCCCCCCCCCCEEEEEECHHHHH LGLAEWRLKADRWVKVPLDMDDPAQLAQALEKVSEVRRVSVDEARALGFWSDEAADENPV CCCHHHEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCC LDAAGMVEVPMWRHAVINIPHPLLKQGLVILDTPGLNAVGAEPELTINLIPQAHAVVFIL CCCCCCEECCCHHHHHHCCCHHHHHCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEE GADTGVTRSDLTIWRDHLGTAEDATDARLVVLNKIDTLWDTLSSPSQVQAQLERQRQTSA ECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ELLGVPLSHVVPVSAQKGLVAKINCDDILLESSGLPLLEEALAEGIMGRRQAILRATVAS HHHCCCHHHHCCCCCCCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GVASLQSETRRVINIRRRDLDDQMLELRSLRGKNASVIDAMRGRIEQEQQEFEASTAKIQ HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AVRAVHLKMLREVFHQLGPRSLKAQLVELTEALQPKGLKLGVRKVYGDTFAKVRTIMEAA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH QSTGIEIQAMLGGTFRQLNTEFGFSLQVPAAPQLGNYVQEIVAIEQRHLQYVGMGNTLRL HHCCCEEEEHHCCHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHEECCCCEEEC AQPEFAQRLLRAMGLRLRTVFESAANELELWSKTATAQLDAQLRERKRSFSRRIEAVNRI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQAANGLVDRIAEIEEAEQHLAELEQRLTELTSDLVRQPQAPEGVDIDIPLTEPQPLAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure GPSFNEQFDQHGAWRRAFAQQLKRLGQWMGSHDLMDAAVEERLQRLEEQVRSDKVTVAF CCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE VAEFSRGKSELINAIFFAGYGRRIMPASAGRTTMCPTELGYENGTAPSLRLLPIDTRMQS HHHHHCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHCCCCCCCCCCEEEEEECHHHHH LGLAEWRLKADRWVKVPLDMDDPAQLAQALEKVSEVRRVSVDEARALGFWSDEAADENPV CCCHHHEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCC LDAAGMVEVPMWRHAVINIPHPLLKQGLVILDTPGLNAVGAEPELTINLIPQAHAVVFIL CCCCCCEECCCHHHHHHCCCHHHHHCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEE GADTGVTRSDLTIWRDHLGTAEDATDARLVVLNKIDTLWDTLSSPSQVQAQLERQRQTSA ECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ELLGVPLSHVVPVSAQKGLVAKINCDDILLESSGLPLLEEALAEGIMGRRQAILRATVAS HHHCCCHHHHCCCCCCCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GVASLQSETRRVINIRRRDLDDQMLELRSLRGKNASVIDAMRGRIEQEQQEFEASTAKIQ HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AVRAVHLKMLREVFHQLGPRSLKAQLVELTEALQPKGLKLGVRKVYGDTFAKVRTIMEAA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH QSTGIEIQAMLGGTFRQLNTEFGFSLQVPAAPQLGNYVQEIVAIEQRHLQYVGMGNTLRL HHCCCEEEEHHCCHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHEECCCCEEEC AQPEFAQRLLRAMGLRLRTVFESAANELELWSKTATAQLDAQLRERKRSFSRRIEAVNRI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQAANGLVDRIAEIEEAEQHLAELEQRLTELTSDLVRQPQAPEGVDIDIPLTEPQPLAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA