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The map label for this gene is yrbD [C]

Identifier: 222109933

GI number: 222109933

Start: 750438

End: 750923

Strand: Direct

Name: yrbD [C]

Synonym: Dtpsy_0718

Alternate gene names: 222109933

Gene position: 750438-750923 (Clockwise)

Preceding gene: 222109932

Following gene: 222109934

Centisome position: 19.77

GC content: 61.52

Gene sequence:

>486_bases
ATGCAGCATTCCAAAAACGATTTCTGGGTGGGGCTGTTCGTCCTGCTGGGCGGAGCGGCGCTGGTCTTCCTGGCCCTGCA
GTCGGCCAACCTATTGAACCTGAACTTCCGCTCGGGCTATACCGTGACGGCGCGTTTCGACAACATCGGCGGGCTCAAGC
CCAAGGCCGCGGTGCGCAGCGCCGGCGTGGTGGTGGGGCGCGTGCAGTCCATCGGCTTCGACGACACGACCTACCAGGCG
CGCGTGACACTGGAGCTGGAAAAGCGCTATGTGTTCCCCAAGGACAGTTCGCTCAAGATCCTGACCAGCGGCCTGTTGGG
CGACCAGTACATTGGCATCGAGCCGGGAGCCGACGAGAACAACCTGGCCGAGGGCGACATGGTGACCGCCACCCAATCCG
CGGTAGTGCTGGAAAACCTGATCGGCCAATTCCTGTATGGCAAGGCCGAAGAAGGTGCTTCGTCCAATGGAGGTACCAAG
AAATGA

Upstream 100 bases:

>100_bases
GTGATGGCGTCGCTGTCCGTGCTGGGGCTGGACTTCGTCCTCACCGCCTTGATGTTCAGTATCTGACGGCGACCATGCGT
CTGTCTTGAGGAAATTCACC

Downstream 100 bases:

>100_bases
CAAATCAACCTCGCTTCACGGGCTGGACTGCCCGCTGGGCGGCGCTGTTGCTCGGCGCGGCCCTCATGAGCGGCTGCGCC
ACGGGCCCCAACGCCAACCC

Product: mammalian cell entry related domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MQHSKNDFWVGLFVLLGGAALVFLALQSANLLNLNFRSGYTVTARFDNIGGLKPKAAVRSAGVVVGRVQSIGFDDTTYQA
RVTLELEKRYVFPKDSSLKILTSGLLGDQYIGIEPGADENNLAEGDMVTATQSAVVLENLIGQFLYGKAEEGASSNGGTK
K

Sequences:

>Translated_161_residues
MQHSKNDFWVGLFVLLGGAALVFLALQSANLLNLNFRSGYTVTARFDNIGGLKPKAAVRSAGVVVGRVQSIGFDDTTYQA
RVTLELEKRYVFPKDSSLKILTSGLLGDQYIGIEPGADENNLAEGDMVTATQSAVVLENLIGQFLYGKAEEGASSNGGTK
K
>Mature_161_residues
MQHSKNDFWVGLFVLLGGAALVFLALQSANLLNLNFRSGYTVTARFDNIGGLKPKAAVRSAGVVVGRVQSIGFDDTTYQA
RVTLELEKRYVFPKDSSLKILTSGLLGDQYIGIEPGADENNLAEGDMVTATQSAVVLENLIGQFLYGKAEEGASSNGGTK
K

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaD family [H]

Homologues:

Organism=Escherichia coli, GI1789584, Length=163, Percent_Identity=47.239263803681, Blast_Score=139, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 17205; Mature: 17205

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHSKNDFWVGLFVLLGGAALVFLALQSANLLNLNFRSGYTVTARFDNIGGLKPKAAVRS
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHH
AGVVVGRVQSIGFDDTTYQARVTLELEKRYVFPKDSSLKILTSGLLGDQYIGIEPGADEN
CCEEEEEHHHCCCCCCCEEEEEEEEEEEEEECCCCCCCEEEEECCCCCEEECCCCCCCCC
NLAEGDMVTATQSAVVLENLIGQFLYGKAEEGASSNGGTKK
CCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQHSKNDFWVGLFVLLGGAALVFLALQSANLLNLNFRSGYTVTARFDNIGGLKPKAAVRS
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHH
AGVVVGRVQSIGFDDTTYQARVTLELEKRYVFPKDSSLKILTSGLLGDQYIGIEPGADEN
CCEEEEEHHHCCCCCCCEEEEEEEEEEEEEECCCCCCCEEEEECCCCCEEECCCCCCCCC
NLAEGDMVTATQSAVVLENLIGQFLYGKAEEGASSNGGTKK
CCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]