| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is mlaE [H]
Identifier: 222109932
GI number: 222109932
Start: 749621
End: 750403
Strand: Direct
Name: mlaE [H]
Synonym: Dtpsy_0717
Alternate gene names: 222109932
Gene position: 749621-750403 (Clockwise)
Preceding gene: 222109931
Following gene: 222109933
Centisome position: 19.74
GC content: 67.82
Gene sequence:
>783_bases ATGAGCTGGTGGCGTCCCACGCACGTAGGCTACGCCGTGCGCACGAAGCTGGCCGATGTGGGCATGGGCGCGCGCCTGTT CGCGCGGCTGCTGGGGCTGTTCGGCGACGTGATGCGCCGCCCTGGCCTGGTGCGTGACCAGGTGCACTTCCTGGGCAACT ATTCGCTGTCCATCATCGCCATGTCGGGCCTGTTTGTGGGCTTCGTGCTTGCGCTGCAGGGCTACAACGTGCTGCAGCTC TATGGCTCGGCCAACTCACTGGGCCTGGTGGTCACGTTGGGCCTGGTGCGCGAGCTGGGGCCGGTGGTCACGGCGCTGCT GTTTGCCGGACGCGCGGGCACGTCGCTCACGGCCGAGATCGGTTTGATGCGCGCCGGCGAACAGCTGTCGGCCATGGAGA TGATGGCCGTGGACCCGGTGCGCCGCATCCTGGCGCCGCGCTTTTGGGGGGGCGTGATCGCCATGCCGCTGCTGGCACTG GTGTTCAACGCGGTGGGTGTGATCGGTGGCTGGCTGGTCGGCGTGGTGCTCATCGGCGTGGACGGCGGGGCGTTCTGGGG CCAGATGCAAAGCGGTGTCGACGTCTGGAAGGACGTGGGCAACGGCATCGTCAAGAGCCTCGCGTTCGGCGTGGCCGTCA CCTTCATCGCGGTGCTGCAGGGCTTCGTGGCCAAGCCGACCCCGGAAGGCGTCTCGCGCGCCACCACGCGCACGGTGGTG ATGGCGTCGCTGTCCGTGCTGGGGCTGGACTTCGTCCTCACCGCCTTGATGTTCAGTATCTGA
Upstream 100 bases:
>100_bases CCGGGCCGGTGCCGTTCCATTACCCCGGCCCCAGCGTGGCCGACGATTTCGGCCCCTTGCGCTCGCCCAGCGTGGACGCC CACGCCAGCGGAGGTACCCC
Downstream 100 bases:
>100_bases CGGCGACCATGCGTCTGTCTTGAGGAAATTCACCATGCAGCATTCCAAAAACGATTTCTGGGTGGGGCTGTTCGTCCTGC TGGGCGGAGCGGCGCTGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSWWRPTHVGYAVRTKLADVGMGARLFARLLGLFGDVMRRPGLVRDQVHFLGNYSLSIIAMSGLFVGFVLALQGYNVLQL YGSANSLGLVVTLGLVRELGPVVTALLFAGRAGTSLTAEIGLMRAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPLLAL VFNAVGVIGGWLVGVVLIGVDGGAFWGQMQSGVDVWKDVGNGIVKSLAFGVAVTFIAVLQGFVAKPTPEGVSRATTRTVV MASLSVLGLDFVLTALMFSI
Sequences:
>Translated_260_residues MSWWRPTHVGYAVRTKLADVGMGARLFARLLGLFGDVMRRPGLVRDQVHFLGNYSLSIIAMSGLFVGFVLALQGYNVLQL YGSANSLGLVVTLGLVRELGPVVTALLFAGRAGTSLTAEIGLMRAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPLLAL VFNAVGVIGGWLVGVVLIGVDGGAFWGQMQSGVDVWKDVGNGIVKSLAFGVAVTFIAVLQGFVAKPTPEGVSRATTRTVV MASLSVLGLDFVLTALMFSI >Mature_259_residues SWWRPTHVGYAVRTKLADVGMGARLFARLLGLFGDVMRRPGLVRDQVHFLGNYSLSIIAMSGLFVGFVLALQGYNVLQLY GSANSLGLVVTLGLVRELGPVVTALLFAGRAGTSLTAEIGLMRAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPLLALV FNAVGVIGGWLVGVVLIGVDGGAFWGQMQSGVDVWKDVGNGIVKSLAFGVAVTFIAVLQGFVAKPTPEGVSRATTRTVVM ASLSVLGLDFVLTALMFSI
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=236, Percent_Identity=58.8983050847458, Blast_Score=255, Evalue=2e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 27514; Mature: 27383
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWWRPTHVGYAVRTKLADVGMGARLFARLLGLFGDVMRRPGLVRDQVHFLGNYSLSIIA CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHH MSGLFVGFVLALQGYNVLQLYGSANSLGLVVTLGLVRELGPVVTALLFAGRAGTSLTAEI HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH GLMRAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPLLALVFNAVGVIGGWLVGVVLIGV HHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DGGAFWGQMQSGVDVWKDVGNGIVKSLAFGVAVTFIAVLQGFVAKPTPEGVSRATTRTVV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH MASLSVLGLDFVLTALMFSI HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SWWRPTHVGYAVRTKLADVGMGARLFARLLGLFGDVMRRPGLVRDQVHFLGNYSLSIIA CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHH MSGLFVGFVLALQGYNVLQLYGSANSLGLVVTLGLVRELGPVVTALLFAGRAGTSLTAEI HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH GLMRAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPLLALVFNAVGVIGGWLVGVVLIGV HHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DGGAFWGQMQSGVDVWKDVGNGIVKSLAFGVAVTFIAVLQGFVAKPTPEGVSRATTRTVV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH MASLSVLGLDFVLTALMFSI HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]