| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109898
Identifier: 222109898
GI number: 222109898
Start: 709445
End: 710173
Strand: Direct
Name: 222109898
Synonym: Dtpsy_0682
Alternate gene names: NA
Gene position: 709445-710173 (Clockwise)
Preceding gene: 222109891
Following gene: 222109900
Centisome position: 18.69
GC content: 69.96
Gene sequence:
>729_bases ATGCAGCACCGCGCCGCCGACGATCGGCAGCAGCACGGCGCCCGTGCGTTCTGTGGCGGCCATCCGCAGAACCCATCCCA GGATGATGGCAACCGTCCAGGCGCTGTACAGCCGCTGCAGCACAGGCGGCGTGCCCGCCAGCAGCAGGAACAGGTGGGCG TGAACAGCGCATTCTTAGGCAGCCTGGACGCGGGGGCCGGGGGTGTATTAGAAAAAATGGCGTCTGCAAGGGCATACATG CGCGGCCTTGCCCAGCAGGGCATCGCTGCGGCCCTGCAGCAGGCCGCCGCCCTTAGCGCCGAGAATCTCCCGGCGCAGCC GCCACGCGTTCGCGCAATGCGTTGTGGAAGTGGCGCTGGTCCTCAAAGCCCAGTTCCTGCGCCACCGTGGCCGGCGCGCC TCCAGCGGCCAGCAGCGCGCGCGGCGTTGACATGCGCGCCTGCACAGGGTTACAAGCCGGCCGCTTGGCGCCACGCGGCG GCGTACTGGTCTGCGTTCGCAACGCGGCGGGATATGAACTCCGCCCCCAAGCTCAGGGACTGCCTGGACGCAGACGTGGG GTTCATAGCCCCGCCGCTGCACGCAGCGCCTGGGCTTTGTGCCGCAAGGCTGCCGCACCCGCTGGCGCGGGTCGCCGTGC CTTACAGCCCGGCCGCTGCACGCAGCGCGGCAGCCTTGTCCGTCCTCTCCCAGGTGAACTCGGGTTCCTCGCGGCCGAAG TGGCCGTAG
Upstream 100 bases:
>100_bases GCTGGGCACCAGAGTAGGGGCGCCGGCGCAGGCGCTCCGTCATCTGGTGAAACCGCAGCGTGTAGGAGGGTGTTGACAGT GCTGCCGGTTATCGCAGCGC
Downstream 100 bases:
>100_bases GCGGCGGTCTTCGCGTAGATGGGGCGCAGCAAGTCCAGCATCTGGATGATGCCCTTAGGGCGCAGGTCGAAGTGCTCCTG CACCAGCTGGGCGATCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MQHRAADDRQQHGARAFCGGHPQNPSQDDGNRPGAVQPLQHRRRARQQQEQVGVNSAFLGSLDAGAGGVLEKMASARAYM RGLAQQGIAAALQQAAALSAENLPAQPPRVRAMRCGSGAGPQSPVPAPPWPARLQRPAARAALTCAPAQGYKPAAWRHAA AYWSAFATRRDMNSAPKLRDCLDADVGFIAPPLHAAPGLCAARLPHPLARVAVPYSPAAARSAAALSVLSQVNSGSSRPK WP
Sequences:
>Translated_242_residues MQHRAADDRQQHGARAFCGGHPQNPSQDDGNRPGAVQPLQHRRRARQQQEQVGVNSAFLGSLDAGAGGVLEKMASARAYM RGLAQQGIAAALQQAAALSAENLPAQPPRVRAMRCGSGAGPQSPVPAPPWPARLQRPAARAALTCAPAQGYKPAAWRHAA AYWSAFATRRDMNSAPKLRDCLDADVGFIAPPLHAAPGLCAARLPHPLARVAVPYSPAAARSAAALSVLSQVNSGSSRPK WP >Mature_242_residues MQHRAADDRQQHGARAFCGGHPQNPSQDDGNRPGAVQPLQHRRRARQQQEQVGVNSAFLGSLDAGAGGVLEKMASARAYM RGLAQQGIAAALQQAAALSAENLPAQPPRVRAMRCGSGAGPQSPVPAPPWPARLQRPAARAALTCAPAQGYKPAAWRHAA AYWSAFATRRDMNSAPKLRDCLDADVGFIAPPLHAAPGLCAARLPHPLARVAVPYSPAAARSAAALSVLSQVNSGSSRPK WP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25393; Mature: 25393
Theoretical pI: Translated: 11.60; Mature: 11.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHRAADDRQQHGARAFCGGHPQNPSQDDGNRPGAVQPLQHRRRARQQQEQVGVNSAFLG CCCCCCCHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHC SLDAGAGGVLEKMASARAYMRGLAQQGIAAALQQAAALSAENLPAQPPRVRAMRCGSGAG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCC PQSPVPAPPWPARLQRPAARAALTCAPAQGYKPAAWRHAAAYWSAFATRRDMNSAPKLRD CCCCCCCCCCHHHHHCHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH CLDADVGFIAPPLHAAPGLCAARLPHPLARVAVPYSPAAARSAAALSVLSQVNSGSSRPK HHHCCCCCCCCCHHHCCCHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC WP CC >Mature Secondary Structure MQHRAADDRQQHGARAFCGGHPQNPSQDDGNRPGAVQPLQHRRRARQQQEQVGVNSAFLG CCCCCCCHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHC SLDAGAGGVLEKMASARAYMRGLAQQGIAAALQQAAALSAENLPAQPPRVRAMRCGSGAG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCC PQSPVPAPPWPARLQRPAARAALTCAPAQGYKPAAWRHAAAYWSAFATRRDMNSAPKLRD CCCCCCCCCCHHHHHCHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH CLDADVGFIAPPLHAAPGLCAARLPHPLARVAVPYSPAAARSAAALSVLSQVNSGSSRPK HHHCCCCCCCCCHHHCCCHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC WP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA