| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is htrB [C]
Identifier: 222109900
GI number: 222109900
Start: 711400
End: 712275
Strand: Direct
Name: htrB [C]
Synonym: Dtpsy_0684
Alternate gene names: 222109900
Gene position: 711400-712275 (Clockwise)
Preceding gene: 222109898
Following gene: 222109901
Centisome position: 18.74
GC content: 70.89
Gene sequence:
>876_bases ATGTCATCCCTCTTTCGGCTCGTTTCCGCGCTGCCCTTGTGGTTGCTGCATGTCATTGGCGCGGCGCTTGGCTGGGTGGC GTTTTGCGCATCGCCCACCTACCGCCGCCGCTTCATCGACAACGCCGCGCGCGCGGGCTATGCCTTGCGTGACGTGCGTG CGGCCATAGCGCACGCAGGGCGCATGGTGGCCGAGGCGCCGCGTCTGTGGCTGCGGCCCGAGCCGCCGGCCTGCGAGATA CACGGGGCCGAATGCGTGCAACGGGCCTGGGGCCAAGGCCGCGGCATCGTGTTCCTCACGCCGCACATTGGCTGTTTCGA GTTGTCGGTGCAGGCGGCGGCGCGGCGCTGGTCGCCGGAGCACGGCCCCATCACCATCCTGTACCGGCCCGCGCGCCAGC GCTGGCTGGCCGAGGTGATGCAGACCGCGCGCAACCGCCCCGGCATCCAGGCCGTGCCCACCACGTTGCAGGGCGTGCGC CAGATGATCAAGGCGCTGCGGCGCGGCGAGGCGGTGGGCCTGCTGCCTGACCAGGTGCCGCCGCAGGGGCTGGGGGTGTG GTCGCCGTTCTTCGGCCGCCCGGCCTACACCATGACGCTGGCTGCGCGCCTGGTGCAGCAGACCGGTGCGGCGGTGATCC TGGCGCGGTGCGAGCGCCTGCCACGCGGGCGCGGCTATGTGCTGCACCTGGAGGATTTGCCCCAGCCGCTGGCGCCTACA CTCGACGCGGCCGTGCTGCAGCTCAACCAAGCCATGGAATACCTCATCCGCCAAAGCCCCGACCAATACCTGTGGGGCTA TGCCCGCTACAAGCAGCCCCGCGCAGAGATGCATACCTCTGCCGGGACCGATGCGCCGCCGGAGGGCCGCGCATGA
Upstream 100 bases:
>100_bases GTTGCCCAGAGCCTCATGGAGCCTCGGCGAACGCTTTAGCAGTTGTGTTTAACGTCGCCCTGCAAGTTGCTCATTTAACT CGGCGACGACCGTCATTGTA
Downstream 100 bases:
>100_bases TGGCGCGCGCGGGCATCGCGCTGCTGAATCTGCTGGGTCGCCTGCCGCTGCCGATGCTGCGCGCGCTGGGGCGGTTCATC GGCCGGGTGCTGTTCGTGCT
Product: lipid a biosynthesis acyltransferase
Products: NA
Alternate protein names: Lipid A Biosynthesis Acyltransferase; Lauroyl/Myristoyl Acyltransferase; Lipid A Biosynthesis-Lipid IVA Acyltransferase; Acyltransferase; Bacterial Lipid A Biosynthesis Acyltransferase Superfamily; Lipid A Biosynthesis Acyltransferase Family; Bacterial Lipid A Biosynthesis Acyltransferase; Lipid A Biosynthesis Lauroyl Acyltransferase Subfamily; Lipid A Biosynthesis Lauroyl Acyltransferase Protein; Acyltransferase Protein; Lauroyl Acyltransferase; Lipid A Lauroyl Acyltransferase Protein; Decanoyltransferase LpxX; Lauryl-Acyl Carrier Protein-Dependent Acyltransferase
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSSLFRLVSALPLWLLHVIGAALGWVAFCASPTYRRRFIDNAARAGYALRDVRAAIAHAGRMVAEAPRLWLRPEPPACEI HGAECVQRAWGQGRGIVFLTPHIGCFELSVQAAARRWSPEHGPITILYRPARQRWLAEVMQTARNRPGIQAVPTTLQGVR QMIKALRRGEAVGLLPDQVPPQGLGVWSPFFGRPAYTMTLAARLVQQTGAAVILARCERLPRGRGYVLHLEDLPQPLAPT LDAAVLQLNQAMEYLIRQSPDQYLWGYARYKQPRAEMHTSAGTDAPPEGRA
Sequences:
>Translated_291_residues MSSLFRLVSALPLWLLHVIGAALGWVAFCASPTYRRRFIDNAARAGYALRDVRAAIAHAGRMVAEAPRLWLRPEPPACEI HGAECVQRAWGQGRGIVFLTPHIGCFELSVQAAARRWSPEHGPITILYRPARQRWLAEVMQTARNRPGIQAVPTTLQGVR QMIKALRRGEAVGLLPDQVPPQGLGVWSPFFGRPAYTMTLAARLVQQTGAAVILARCERLPRGRGYVLHLEDLPQPLAPT LDAAVLQLNQAMEYLIRQSPDQYLWGYARYKQPRAEMHTSAGTDAPPEGRA >Mature_290_residues SSLFRLVSALPLWLLHVIGAALGWVAFCASPTYRRRFIDNAARAGYALRDVRAAIAHAGRMVAEAPRLWLRPEPPACEIH GAECVQRAWGQGRGIVFLTPHIGCFELSVQAAARRWSPEHGPITILYRPARQRWLAEVMQTARNRPGIQAVPTTLQGVRQ MIKALRRGEAVGLLPDQVPPQGLGVWSPFFGRPAYTMTLAARLVQQTGAAVILARCERLPRGRGYVLHLEDLPQPLAPTL DAAVLQLNQAMEYLIRQSPDQYLWGYARYKQPRAEMHTSAGTDAPPEGRA
Specific function: Acylates The Intermediate (Kdo)2-Lipid IVa To Form (Kdo)2-(Lauroyl)-Lipid IVa. Has 10 Fold Selectivity For Lauroyl- Acp Over Myristoyl-Acp. [C]
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787292, Length=197, Percent_Identity=28.9340101522843, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI87082094, Length=216, Percent_Identity=25.462962962963, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.-
Molecular weight: Translated: 32274; Mature: 32143
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLFRLVSALPLWLLHVIGAALGWVAFCASPTYRRRFIDNAARAGYALRDVRAAIAHAG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMVAEAPRLWLRPEPPACEIHGAECVQRAWGQGRGIVFLTPHIGCFELSVQAAARRWSPE HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCC HGPITILYRPARQRWLAEVMQTARNRPGIQAVPTTLQGVRQMIKALRRGEAVGLLPDQVP CCCEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCC PQGLGVWSPFFGRPAYTMTLAARLVQQTGAAVILARCERLPRGRGYVLHLEDLPQPLAPT CCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEEEHHHCCCCCCHH LDAAVLQLNQAMEYLIRQSPDQYLWGYARYKQPRAEMHTSAGTDAPPEGRA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SSLFRLVSALPLWLLHVIGAALGWVAFCASPTYRRRFIDNAARAGYALRDVRAAIAHAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMVAEAPRLWLRPEPPACEIHGAECVQRAWGQGRGIVFLTPHIGCFELSVQAAARRWSPE HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCC HGPITILYRPARQRWLAEVMQTARNRPGIQAVPTTLQGVRQMIKALRRGEAVGLLPDQVP CCCEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCC PQGLGVWSPFFGRPAYTMTLAARLVQQTGAAVILARCERLPRGRGYVLHLEDLPQPLAPT CCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEEEHHHCCCCCCHH LDAAVLQLNQAMEYLIRQSPDQYLWGYARYKQPRAEMHTSAGTDAPPEGRA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Acyltransferases [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA