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The map label for this gene is yliC [C]

Identifier: 222109880

GI number: 222109880

Start: 688433

End: 689416

Strand: Direct

Name: yliC [C]

Synonym: Dtpsy_0664

Alternate gene names: 222109880

Gene position: 688433-689416 (Clockwise)

Preceding gene: 222109879

Following gene: 222109881

Centisome position: 18.13

GC content: 64.53

Gene sequence:

>984_bases
ATGCTTGCCTTCATCCTGCGCCGACTTATCCAGGCCGTGATCGTCATGGTCGCCGTGGCCTTCATCTCGTTCATGCTGTT
CCAGTTCGTGGGCGACCCCGTGGTCTTCCTGCTGGGGCAGGACGCCACGCCCGAGCAGATCACCGAGATGCGTGCCGCCC
TGGGGTTGGACCAGCCATTCATCGTGCAGTTCTGGCACTTCCTGGTGAATGCGGCGCAGGGCGAATTCGGGCTCTCCCTG
CGCCAGGGGGCCAAGGTCTCGCGGCTGATCGCCGAGCGCTTCCCGGCCACGCTGGAGCTGGCGCTGGTGGCCGCCTTCAT
CGCCCTCGCGGTGGGAATGCCCATGGGGGTGTATGCGGCGCTCAAGCGCGGCACCTTCACCAGCCAGGTGTTCATGACGC
TGTCGTTGCTGGGTGTGTCGCTGCCTACGTTCCTGATCGGCATTTTGCTGATCCTGGTGTTCTCGGTCACGCTGGGATGG
TTCCCCAGTTTCGGGCGCGGTGATGTGACGCAGCTGGGCTGGTGGAGCACGGGTTTGCTCACGGCCAAGGGTTGGCACCA
CATCACGCTGCCGGCCATCACGCTCGCCATCTTCCAGCTCACGCTGATCATGCGCCTGGTGCGCGCCGAGATGCTGGAAG
TGCTGCGCACCGACTACATCAAGTTCGCCCGTGCGCGTGGCCTGACCGACCGCGCCATCCACTTTGGCCATGCGCTCAAG
AACACGCTGGTGCCGGTGATGACCATCACCGGCCTGCAACTGGGCGGCCTGATTGCGTTTGCCATCATCACCGAGACGGT
GTTCCAGTGGCCCGGCATGGGCCTGCTGTTCATCCAGGCCGTGACCTTTGCCGACATCCCCGTGATGGCCGCTTACCTCT
GCCTGATCGCGCTGATCTTCGTGGTCATCAACCTGGTGGTGGACCTGCTGTACTTCGCAGTGGACCCGCGCCTGCGCGTG
GGCGGCAAGGCGGGAGGGCACTGA

Upstream 100 bases:

>100_bases
CGAACCACGGCCAGTCTAAGCACCCGGCCGCTGCGGGGACGAGCCTTGGCTGCGCCCCGATGCCTGCTAGCATGGCCCGA
CATCTTGCAATAGCCCGAGA

Downstream 100 bases:

>100_bases
CATGCAGGCCGTGCAGCAGCGCTTGAAGGCAGGCGGACGCGCTTTCGCCCACATCGCGCAGTACCACCCGGAGCTCACCG
CATTCCGCCGCGACCTGCAT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MLAFILRRLIQAVIVMVAVAFISFMLFQFVGDPVVFLLGQDATPEQITEMRAALGLDQPFIVQFWHFLVNAAQGEFGLSL
RQGAKVSRLIAERFPATLELALVAAFIALAVGMPMGVYAALKRGTFTSQVFMTLSLLGVSLPTFLIGILLILVFSVTLGW
FPSFGRGDVTQLGWWSTGLLTAKGWHHITLPAITLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLTDRAIHFGHALK
NTLVPVMTITGLQLGGLIAFAIITETVFQWPGMGLLFIQAVTFADIPVMAAYLCLIALIFVVINLVVDLLYFAVDPRLRV
GGKAGGH

Sequences:

>Translated_327_residues
MLAFILRRLIQAVIVMVAVAFISFMLFQFVGDPVVFLLGQDATPEQITEMRAALGLDQPFIVQFWHFLVNAAQGEFGLSL
RQGAKVSRLIAERFPATLELALVAAFIALAVGMPMGVYAALKRGTFTSQVFMTLSLLGVSLPTFLIGILLILVFSVTLGW
FPSFGRGDVTQLGWWSTGLLTAKGWHHITLPAITLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLTDRAIHFGHALK
NTLVPVMTITGLQLGGLIAFAIITETVFQWPGMGLLFIQAVTFADIPVMAAYLCLIALIFVVINLVVDLLYFAVDPRLRV
GGKAGGH
>Mature_327_residues
MLAFILRRLIQAVIVMVAVAFISFMLFQFVGDPVVFLLGQDATPEQITEMRAALGLDQPFIVQFWHFLVNAAQGEFGLSL
RQGAKVSRLIAERFPATLELALVAAFIALAVGMPMGVYAALKRGTFTSQVFMTLSLLGVSLPTFLIGILLILVFSVTLGW
FPSFGRGDVTQLGWWSTGLLTAKGWHHITLPAITLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLTDRAIHFGHALK
NTLVPVMTITGLQLGGLIAFAIITETVFQWPGMGLLFIQAVTFADIPVMAAYLCLIALIFVVINLVVDLLYFAVDPRLRV
GGKAGGH

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=320, Percent_Identity=38.125, Blast_Score=230, Evalue=7e-62,
Organism=Escherichia coli, GI1789965, Length=340, Percent_Identity=39.1176470588235, Blast_Score=219, Evalue=2e-58,
Organism=Escherichia coli, GI1789888, Length=331, Percent_Identity=35.6495468277946, Blast_Score=201, Evalue=5e-53,
Organism=Escherichia coli, GI1787497, Length=321, Percent_Identity=32.398753894081, Blast_Score=175, Evalue=4e-45,
Organism=Escherichia coli, GI1787761, Length=339, Percent_Identity=36.8731563421829, Blast_Score=166, Evalue=3e-42,
Organism=Escherichia coli, GI1787550, Length=268, Percent_Identity=33.5820895522388, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1788504, Length=292, Percent_Identity=29.1095890410959, Blast_Score=117, Evalue=8e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35852; Mature: 35852

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAFILRRLIQAVIVMVAVAFISFMLFQFVGDPVVFLLGQDATPEQITEMRAALGLDQPF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCHH
IVQFWHFLVNAAQGEFGLSLRQGAKVSRLIAERFPATLELALVAAFIALAVGMPMGVYAA
HHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHH
LKRGTFTSQVFMTLSLLGVSLPTFLIGILLILVFSVTLGWFPSFGRGDVTQLGWWSTGLL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE
TAKGWHHITLPAITLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLTDRAIHFGHALK
EECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
NTLVPVMTITGLQLGGLIAFAIITETVFQWPGMGLLFIQAVTFADIPVMAAYLCLIALIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVINLVVDLLYFAVDPRLRVGGKAGGH
HHHHHHHHHHHHHCCCCCEECCCCCCC
>Mature Secondary Structure
MLAFILRRLIQAVIVMVAVAFISFMLFQFVGDPVVFLLGQDATPEQITEMRAALGLDQPF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCHH
IVQFWHFLVNAAQGEFGLSLRQGAKVSRLIAERFPATLELALVAAFIALAVGMPMGVYAA
HHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHH
LKRGTFTSQVFMTLSLLGVSLPTFLIGILLILVFSVTLGWFPSFGRGDVTQLGWWSTGLL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE
TAKGWHHITLPAITLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLTDRAIHFGHALK
EECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
NTLVPVMTITGLQLGGLIAFAIITETVFQWPGMGLLFIQAVTFADIPVMAAYLCLIALIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVINLVVDLLYFAVDPRLRVGGKAGGH
HHHHHHHHHHHHHCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]