| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109666
Identifier: 222109666
GI number: 222109666
Start: 459399
End: 459656
Strand: Direct
Name: 222109666
Synonym: Dtpsy_0446
Alternate gene names: NA
Gene position: 459399-459656 (Clockwise)
Preceding gene: 222109665
Following gene: 222109668
Centisome position: 12.1
GC content: 62.79
Gene sequence:
>258_bases ATGTCCGATCTGAACGCCACCTTCGAGGCCGCCGTGGCCAATTCCAAGAACCTCAGCGAGCGCCCCGACAACCCGACGCT GCTGAAGATCTATGCGTTGTACAAGCAGGCCACCGCCGGCGACAACGCCGAGAAGAAGCCGAGCTTCTCTGACATCGTGG GGCGCGCCAAGTGGGACGCGTGGGAAAAGCTCAAGGGCACGTCCGGCGACGCGGCCAAGCAGCAGTACATCGACTTGATC GAATCCCTGCGCGGCTGA
Upstream 100 bases:
>100_bases GCTGTGCATGGCGTGACCCTGGGGAGACTTTAAAAAAGAACGGTCGTTCGTGTTTTGACTACACTGTGCGGCGATACCAA CCCTGAACCGGAGACACTCC
Downstream 100 bases:
>100_bases GCGCTGTGGGCCCGCCAGCGTGTGGGCCCCCCAGGCCGCGAAGCCGCAGGCAGGCATGCGGGCGGGGGCAACGCGGCGTC AGCCTCCGCCGTGGGCCACC
Product: acyl-CoA-binding protein acbp
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MSDLNATFEAAVANSKNLSERPDNPTLLKIYALYKQATAGDNAEKKPSFSDIVGRAKWDAWEKLKGTSGDAAKQQYIDLI ESLRG
Sequences:
>Translated_85_residues MSDLNATFEAAVANSKNLSERPDNPTLLKIYALYKQATAGDNAEKKPSFSDIVGRAKWDAWEKLKGTSGDAAKQQYIDLI ESLRG >Mature_84_residues SDLNATFEAAVANSKNLSERPDNPTLLKIYALYKQATAGDNAEKKPSFSDIVGRAKWDAWEKLKGTSGDAAKQQYIDLIE SLRG
Specific function: Unknown
COG id: COG4281
COG function: function code I; Acyl-CoA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI120433590, Length=80, Percent_Identity=43.75, Blast_Score=75, Evalue=1e-14, Organism=Homo sapiens, GI120433593, Length=79, Percent_Identity=44.3037974683544, Blast_Score=75, Evalue=1e-14, Organism=Homo sapiens, GI295842514, Length=69, Percent_Identity=44.9275362318841, Blast_Score=69, Evalue=6e-13, Organism=Homo sapiens, GI295842534, Length=69, Percent_Identity=44.9275362318841, Blast_Score=69, Evalue=6e-13, Organism=Homo sapiens, GI295849266, Length=69, Percent_Identity=44.9275362318841, Blast_Score=69, Evalue=8e-13, Organism=Homo sapiens, GI295849279, Length=69, Percent_Identity=44.9275362318841, Blast_Score=68, Evalue=1e-12, Organism=Homo sapiens, GI10140853, Length=69, Percent_Identity=44.9275362318841, Blast_Score=68, Evalue=1e-12, Organism=Homo sapiens, GI260274832, Length=71, Percent_Identity=45.0704225352113, Blast_Score=66, Evalue=6e-12, Organism=Homo sapiens, GI45643119, Length=71, Percent_Identity=45.0704225352113, Blast_Score=66, Evalue=7e-12, Organism=Homo sapiens, GI260275230, Length=71, Percent_Identity=45.0704225352113, Blast_Score=66, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17535521, Length=78, Percent_Identity=51.2820512820513, Blast_Score=81, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17506027, Length=80, Percent_Identity=45, Blast_Score=77, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6321474, Length=80, Percent_Identity=42.5, Blast_Score=71, Evalue=3e-14, Organism=Drosophila melanogaster, GI24659809, Length=80, Percent_Identity=46.25, Blast_Score=82, Evalue=7e-17, Organism=Drosophila melanogaster, GI24659814, Length=80, Percent_Identity=46.25, Blast_Score=82, Evalue=7e-17, Organism=Drosophila melanogaster, GI24582714, Length=83, Percent_Identity=44.578313253012, Blast_Score=69, Evalue=4e-13, Organism=Drosophila melanogaster, GI21357027, Length=75, Percent_Identity=41.3333333333333, Blast_Score=63, Evalue=3e-11, Organism=Drosophila melanogaster, GI19920606, Length=88, Percent_Identity=37.5, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9333; Mature: 9202
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLNATFEAAVANSKNLSERPDNPTLLKIYALYKQATAGDNAEKKPSFSDIVGRAKWDA CCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH WEKLKGTSGDAAKQQYIDLIESLRG HHHHCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SDLNATFEAAVANSKNLSERPDNPTLLKIYALYKQATAGDNAEKKPSFSDIVGRAKWDA CCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH WEKLKGTSGDAAKQQYIDLIESLRG HHHHCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA