| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109665
Identifier: 222109665
GI number: 222109665
Start: 458214
End: 459314
Strand: Direct
Name: 222109665
Synonym: Dtpsy_0445
Alternate gene names: NA
Gene position: 458214-459314 (Clockwise)
Preceding gene: 222109664
Following gene: 222109666
Centisome position: 12.07
GC content: 71.57
Gene sequence:
>1101_bases ATGATCGGTATCCCGCAGGCGTTCGCCGCAAGGTACGCACAGGCGCGGGCCCAATTTGTTGGCGCCGCGGCGGTGGCCGG CCTGGCGCTGCAGCCGCAGGTGCATCCGCTGTGCGGCCCCAATGGCGAAACGCTGGCGCTGGACGTGGTGCGGGAGGGGC CGCTTGACGCGCCCCGTCTGCTCATCGTGAGCAGCGGCTGCCACGGCGTGGAGGGCCTGTGCGGTAGCGGCGTGCAGGTG TTCGCGCTGCAGGATGGCGAGTGGCGGGCCAAGGCACGGGCGCAGCGTGTGGCCGTGCTCTACCTGCATGCGCTCAACCC GTACGGCTTCGCCCACCTGCGCCGCGTGACACACGAAAACGTGGACCTGAATCGCAATTTCGTGGACTTCAGCCAGCCGT TGCCGGCCAACCCCGCCTACAGTGCGCTGCACCCCGTGTTGTTGCCGCCCGAATGGCCGCCCAGCGAGGCCAATACGCAG GCCTTGCTCGGTCTGCTGAATACGCACGGCTTGCAGGCGCTGCAGGCGGCGATCACCCGCGGGCAGTACCAGCACCCGGA CGGCCTGTACTTCGGCGGCACGGCGCCCACCTGGAGCAACCGCACGTTGCGCTCCGTGCTGCGCCGCGAGGGCGCGCGCG CCGAACGCATCGCCTGGGTGGACCTGCACACGGGCCTGGGGCCGAGCGGCCATGGCGAGCGCATCCATGCGGGGCGCGAC GAGGCGCAGGCCCTGGCGCGTGCGCGCCGCTGGTGGGACGGGGGTGGCGCCACGCCGGTCACGTCCACCGAAGACGGCTC CTCCACCTCCGCGCCGCTCACGGGGCTGATGTGCAACAGCGCCTATGACGAGTGCCCGCAGGCGGAGGTCACGGCCCTCA CGCTGGAGTTCGGCACGCAGCCCGCGTCCGCCGTGCTGCAGGCGCTGCGGGCGGACCATTGGCTGCACCGGCATCCCGAG GCATCGCCCGCCCTGGCCGCGCGGGTCCATGCCCAGATGCGCGAGGCCTTCTACACCGACACCGACGCCTGGAAGGGCCA GGTGATCAGCCAGGCGCGGCAGGTGCTGTTCCAGGCCGTGGATGGGCTGTGCATGGCGTGA
Upstream 100 bases:
>100_bases GAGGTTCCGGGTCCCCGTGAGGCGGCATTCACATGGCTGACATGCCCAGGCTCCACCGTTGCGCGGTGGGGCCTTTTTTA CATGTCCAAAGGGGGTTTCG
Downstream 100 bases:
>100_bases CCCTGGGGAGACTTTAAAAAAGAACGGTCGTTCGTGTTTTGACTACACTGTGCGGCGATACCAACCCTGAACCGGAGACA CTCCATGTCCGATCTGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MIGIPQAFAARYAQARAQFVGAAAVAGLALQPQVHPLCGPNGETLALDVVREGPLDAPRLLIVSSGCHGVEGLCGSGVQV FALQDGEWRAKARAQRVAVLYLHALNPYGFAHLRRVTHENVDLNRNFVDFSQPLPANPAYSALHPVLLPPEWPPSEANTQ ALLGLLNTHGLQALQAAITRGQYQHPDGLYFGGTAPTWSNRTLRSVLRREGARAERIAWVDLHTGLGPSGHGERIHAGRD EAQALARARRWWDGGGATPVTSTEDGSSTSAPLTGLMCNSAYDECPQAEVTALTLEFGTQPASAVLQALRADHWLHRHPE ASPALAARVHAQMREAFYTDTDAWKGQVISQARQVLFQAVDGLCMA
Sequences:
>Translated_366_residues MIGIPQAFAARYAQARAQFVGAAAVAGLALQPQVHPLCGPNGETLALDVVREGPLDAPRLLIVSSGCHGVEGLCGSGVQV FALQDGEWRAKARAQRVAVLYLHALNPYGFAHLRRVTHENVDLNRNFVDFSQPLPANPAYSALHPVLLPPEWPPSEANTQ ALLGLLNTHGLQALQAAITRGQYQHPDGLYFGGTAPTWSNRTLRSVLRREGARAERIAWVDLHTGLGPSGHGERIHAGRD EAQALARARRWWDGGGATPVTSTEDGSSTSAPLTGLMCNSAYDECPQAEVTALTLEFGTQPASAVLQALRADHWLHRHPE ASPALAARVHAQMREAFYTDTDAWKGQVISQARQVLFQAVDGLCMA >Mature_366_residues MIGIPQAFAARYAQARAQFVGAAAVAGLALQPQVHPLCGPNGETLALDVVREGPLDAPRLLIVSSGCHGVEGLCGSGVQV FALQDGEWRAKARAQRVAVLYLHALNPYGFAHLRRVTHENVDLNRNFVDFSQPLPANPAYSALHPVLLPPEWPPSEANTQ ALLGLLNTHGLQALQAAITRGQYQHPDGLYFGGTAPTWSNRTLRSVLRREGARAERIAWVDLHTGLGPSGHGERIHAGRD EAQALARARRWWDGGGATPVTSTEDGSSTSAPLTGLMCNSAYDECPQAEVTALTLEFGTQPASAVLQALRADHWLHRHPE ASPALAARVHAQMREAFYTDTDAWKGQVISQARQVLFQAVDGLCMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39375; Mature: 39375
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGIPQAFAARYAQARAQFVGAAAVAGLALQPQVHPLCGPNGETLALDVVREGPLDAPRL CCCCCHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCCCCCCCEEEEEEEECCCCCCCEE LIVSSGCHGVEGLCGSGVQVFALQDGEWRAKARAQRVAVLYLHALNPYGFAHLRRVTHEN EEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHCC VDLNRNFVDFSQPLPANPAYSALHPVLLPPEWPPSEANTQALLGLLNTHGLQALQAAITR CCCCCCEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC GQYQHPDGLYFGGTAPTWSNRTLRSVLRREGARAERIAWVDLHTGLGPSGHGERIHAGRD CCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCHHEEEEEEEECCCCCCCCCCCCCCCCH EAQALARARRWWDGGGATPVTSTEDGSSTSAPLTGLMCNSAYDECPQAEVTALTLEFGTQ HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHCCCCEEEEEEEECCCC PASAVLQALRADHWLHRHPEASPALAARVHAQMREAFYTDTDAWKGQVISQARQVLFQAV CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH DGLCMA HHHHCC >Mature Secondary Structure MIGIPQAFAARYAQARAQFVGAAAVAGLALQPQVHPLCGPNGETLALDVVREGPLDAPRL CCCCCHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCCCCCCCEEEEEEEECCCCCCCEE LIVSSGCHGVEGLCGSGVQVFALQDGEWRAKARAQRVAVLYLHALNPYGFAHLRRVTHEN EEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHCC VDLNRNFVDFSQPLPANPAYSALHPVLLPPEWPPSEANTQALLGLLNTHGLQALQAAITR CCCCCCEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC GQYQHPDGLYFGGTAPTWSNRTLRSVLRREGARAERIAWVDLHTGLGPSGHGERIHAGRD CCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCHHEEEEEEEECCCCCCCCCCCCCCCCH EAQALARARRWWDGGGATPVTSTEDGSSTSAPLTGLMCNSAYDECPQAEVTALTLEFGTQ HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHCCCCEEEEEEEECCCC PASAVLQALRADHWLHRHPEASPALAARVHAQMREAFYTDTDAWKGQVISQARQVLFQAV CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH DGLCMA HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA