| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109661
Identifier: 222109661
GI number: 222109661
Start: 452423
End: 453391
Strand: Direct
Name: 222109661
Synonym: Dtpsy_0441
Alternate gene names: NA
Gene position: 452423-453391 (Clockwise)
Preceding gene: 222109660
Following gene: 222109663
Centisome position: 11.92
GC content: 71.41
Gene sequence:
>969_bases ATGGAACGCAGAACCTTCCTGGCGGCCTGTGCCGCCACGGCGGCGGCGCCGTGGGCGCGTGCCGACACGGGCTATCCCAG CCAACCCATCCGCTGGGTGGTGCCCTACCCAGCGGGCGGCGGTACCGACGTGCTGGCGCGCACCGTGGCCGAGGCCATGC GCGGCGGGCTGGGCCAGCAGATCGTGGTGGACAACCGGCCTGGCGCGTCCACCAACATCGGCAGCCAGATCGTCGCCACC GCCAAGCCGGACGGCTACACTGTCATGTCGGCGGACAACGCGCTGCTGGCCTACAACGAGCACCTGTACCGCCGGCTGCC CTTCCACCCGGACAAGGACTTCACGTACATCGGCGGGCTGTCGCGCTTTCCTCTGGTGCTGGTGGTGAATCCGGCGTTCG CGGCGCAGACCTTCCAGGACTTCCTGGCCTATGTGAAGGCCCACCCCGGCCAGGTGAACTACGCCTCGCCCGGCAACGGC TCGCCGCACCACCTGGCGATGGAGTTGTTCAAGCACCGCACGCAGACGTTCCTTACGCACATTCCCTACCGCGGCGCGGC CCCGGCGGTGCAGGACGTGATGGGTGGTCAGGTGCCCTGCATGTTCCTGGACCTTGCGGCCGGCCTGCCGGTGATCCAGT CGGGCAAGGTGCGGGCGCTGGCCATCGGCGCCGCCCGGCGTGCGGCCGCGCTGCCGCACGTGCCCACGCTGGCAGAGGTG GGCGTGGCCGATGCCGAGGTCTATGCGTTTCAGGGCCTGCTGGGCCCGGCCGGGCTGCCGCCGGCCATCACCGCGCGGCT GAATGCCGCGCTGAACCAGGCGTTGGCCGCGCCCGAGGTGGTGGAGCGCATGCGGGCCTTTGGCATGGAACCGCTGGCCG GCACGCCCGAGCAGTTCCACGCGCTGGCCCGCGCCGAGGCGCGGCGCTGGGGGCCGGTCATTGCCGCCACGGGCGTGAAG CTGGATTGA
Upstream 100 bases:
>100_bases CAGACCATTGCCGCGCCGCAGTAGTTTGAGGTCGTTTTGGGCCGTAGCGCTCGTCCATCAAGCGCGAGCAGCTATTCATA AAAGAGCAAGGAGACAACCG
Downstream 100 bases:
>100_bases GGTTTGGTGCCAAAAGTGGCTGTAGCGCTTGACAGTCAAGCGCTATCAGCTCACTTTTTGATAGTTAAGAGGCCAGCGGC TCCACCTGCACCCGGCAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MERRTFLAACAATAAAPWARADTGYPSQPIRWVVPYPAGGGTDVLARTVAEAMRGGLGQQIVVDNRPGASTNIGSQIVAT AKPDGYTVMSADNALLAYNEHLYRRLPFHPDKDFTYIGGLSRFPLVLVVNPAFAAQTFQDFLAYVKAHPGQVNYASPGNG SPHHLAMELFKHRTQTFLTHIPYRGAAPAVQDVMGGQVPCMFLDLAAGLPVIQSGKVRALAIGAARRAAALPHVPTLAEV GVADAEVYAFQGLLGPAGLPPAITARLNAALNQALAAPEVVERMRAFGMEPLAGTPEQFHALARAEARRWGPVIAATGVK LD
Sequences:
>Translated_322_residues MERRTFLAACAATAAAPWARADTGYPSQPIRWVVPYPAGGGTDVLARTVAEAMRGGLGQQIVVDNRPGASTNIGSQIVAT AKPDGYTVMSADNALLAYNEHLYRRLPFHPDKDFTYIGGLSRFPLVLVVNPAFAAQTFQDFLAYVKAHPGQVNYASPGNG SPHHLAMELFKHRTQTFLTHIPYRGAAPAVQDVMGGQVPCMFLDLAAGLPVIQSGKVRALAIGAARRAAALPHVPTLAEV GVADAEVYAFQGLLGPAGLPPAITARLNAALNQALAAPEVVERMRAFGMEPLAGTPEQFHALARAEARRWGPVIAATGVK LD >Mature_322_residues MERRTFLAACAATAAAPWARADTGYPSQPIRWVVPYPAGGGTDVLARTVAEAMRGGLGQQIVVDNRPGASTNIGSQIVAT AKPDGYTVMSADNALLAYNEHLYRRLPFHPDKDFTYIGGLSRFPLVLVVNPAFAAQTFQDFLAYVKAHPGQVNYASPGNG SPHHLAMELFKHRTQTFLTHIPYRGAAPAVQDVMGGQVPCMFLDLAAGLPVIQSGKVRALAIGAARRAAALPHVPTLAEV GVADAEVYAFQGLLGPAGLPPAITARLNAALNQALAAPEVVERMRAFGMEPLAGTPEQFHALARAEARRWGPVIAATGVK LD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34089; Mature: 34089
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERRTFLAACAATAAAPWARADTGYPSQPIRWVVPYPAGGGTDVLARTVAEAMRGGLGQQ CCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCE IVVDNRPGASTNIGSQIVATAKPDGYTVMSADNALLAYNEHLYRRLPFHPDKDFTYIGGL EEEECCCCCCCCCCCEEEEEECCCCEEEEECCCEEEEHHHHHHHHCCCCCCCCEEEECCC SRFPLVLVVNPAFAAQTFQDFLAYVKAHPGQVNYASPGNGSPHHLAMELFKHRTQTFLTH CCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH IPYRGAAPAVQDVMGGQVPCMFLDLAAGLPVIQSGKVRALAIGAARRAAALPHVPTLAEV CCCCCCCHHHHHHHCCCCCHHHHHHHCCCCEECCCCEEEEEECCHHHHHCCCCCCCHHHC GVADAEVYAFQGLLGPAGLPPAITARLNAALNQALAAPEVVERMRAFGMEPLAGTPEQFH CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHH ALARAEARRWGPVIAATGVKLD HHHHHHHHHCCCEEEECCCCCC >Mature Secondary Structure MERRTFLAACAATAAAPWARADTGYPSQPIRWVVPYPAGGGTDVLARTVAEAMRGGLGQQ CCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCE IVVDNRPGASTNIGSQIVATAKPDGYTVMSADNALLAYNEHLYRRLPFHPDKDFTYIGGL EEEECCCCCCCCCCCEEEEEECCCCEEEEECCCEEEEHHHHHHHHCCCCCCCCEEEECCC SRFPLVLVVNPAFAAQTFQDFLAYVKAHPGQVNYASPGNGSPHHLAMELFKHRTQTFLTH CCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH IPYRGAAPAVQDVMGGQVPCMFLDLAAGLPVIQSGKVRALAIGAARRAAALPHVPTLAEV CCCCCCCHHHHHHHCCCCCHHHHHHHCCCCEECCCCEEEEEECCHHHHHCCCCCCCHHHC GVADAEVYAFQGLLGPAGLPPAITARLNAALNQALAAPEVVERMRAFGMEPLAGTPEQFH CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHH ALARAEARRWGPVIAATGVKLD HHHHHHHHHCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]