Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is livJ [C]

Identifier: 222109663

GI number: 222109663

Start: 455644

End: 456792

Strand: Direct

Name: livJ [C]

Synonym: Dtpsy_0443

Alternate gene names: 222109663

Gene position: 455644-456792 (Clockwise)

Preceding gene: 222109661

Following gene: 222109664

Centisome position: 12.0

GC content: 69.28

Gene sequence:

>1149_bases
ATGCATTCAACGCGGTTGAGCCGCCGGCAATTCTCGGCAGGGATGGGCGCGGCCCTGCTGACCGGCGCATCCCTGACGCG
CGCGCAGAGCGACACGCGCATTGTGCTGGGCCAATCCGCGGCCCTGACCGGGCCTGCCAGCCAATTGGGCCTGCAGTTCC
AGGCGGGTGCCAAGCTGGCGTTCGACCAGGTCAACGCCCAGGGCGGCATCGGGCGGCGCACCATCGAGCTGCGCTCGCTG
GACGACGGCTACGAGCCCGACCGCTGCGCCGAGAACACGCGCCGCCTGATCAATGAGGACGTGCTGGCCCTCTTTGGCTA
CGTGGGCACGCCCACCAGCCTGGCCGCGCAACCACTGTTCACGCAGACTAAGGTGCCATTCTTCGCGCCCGTCACGGGCG
CGGAATCCCTGCGCCAGCCGTTCAACCGCCTGGCCTTTCACGTGCGCGCCTCCTACGCCGACGAGGCCGAGCTCATCGTG
CGCCAGCTCACCAACCTGGGGCTGGACCGTATCGGCGTCTTCTACCAGGACGACGCCTACGGCAAGGCTGGCCTGGACGC
CGTGACCCGCGCACTGGCCACGCGCAAGCTGGCGCCCGTGGCGACCGGCACGGTGGCGCGCAACTCCACCAACGTGACGG
CTGCCGTGGCGCCGCTGGTGGCGGCGCAGCCCGTGGCCATCGTGCAGATCGGTGCCTATGCCGCCAGTGCGGCGTTCGTG
CTGGCCGCGCGCAAGGCGGGGTACGGCGGCAAGTTCTACAACGTTTCCTTCGTGGGCACGCAGGCGCTGGCGGATGCGCT
GGGCGCCAACGGCGCGGGCGTGGTGGTGTCGCAGGTGGTGCCTTCGCCCTACCAACAGTCGCGCCAGATCACGCGTGAAT
TCCAAGAGGCCATCAAGAAGGGCGGCAACGTGCAGGCCAACTACTCCAGCATGGAGGGCTACCTGGCCGCGCGCGTCTTC
ATCGAGGGGTTGCGCAACGCGCAGGCGCACGCCAGCGGCAAGCTCACGCGCGAGAGCCTGGTGGCGGGGCTGGAATCCCT
GCGCGGTTCGGTGGGCGGTTTTACGGTCAACTTCAGCCCGTCCGACCATGAGGGCTCGCGCTTCGTGGAGATGTCCATGC
TCACCGGCGACGGCCGCGTGCGCACCTGA

Upstream 100 bases:

>100_bases
ATGAACCGGGGGAAACGGGCTTCGGTAAACTTCGCGCCGGGCACTCCGTTTAACGCAGTGCCTTATTTATTTCAATAATG
GTTTACTCTGAGGGTTTTCT

Downstream 100 bases:

>100_bases
GCGCCCCGCGCCCGCCGGCGCCATCGGCGGGCCGCAGGGGCTTCGGGCCCGCTTCGGCGCGGATCGGGGAGCACGGCTAG
ACTGTGGCATTCCCAGGACG

Product: extracellular ligand-binding receptor

Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]

Alternate protein names: None

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MHSTRLSRRQFSAGMGAALLTGASLTRAQSDTRIVLGQSAALTGPASQLGLQFQAGAKLAFDQVNAQGGIGRRTIELRSL
DDGYEPDRCAENTRRLINEDVLALFGYVGTPTSLAAQPLFTQTKVPFFAPVTGAESLRQPFNRLAFHVRASYADEAELIV
RQLTNLGLDRIGVFYQDDAYGKAGLDAVTRALATRKLAPVATGTVARNSTNVTAAVAPLVAAQPVAIVQIGAYAASAAFV
LAARKAGYGGKFYNVSFVGTQALADALGANGAGVVVSQVVPSPYQQSRQITREFQEAIKKGGNVQANYSSMEGYLAARVF
IEGLRNAQAHASGKLTRESLVAGLESLRGSVGGFTVNFSPSDHEGSRFVEMSMLTGDGRVRT

Sequences:

>Translated_382_residues
MHSTRLSRRQFSAGMGAALLTGASLTRAQSDTRIVLGQSAALTGPASQLGLQFQAGAKLAFDQVNAQGGIGRRTIELRSL
DDGYEPDRCAENTRRLINEDVLALFGYVGTPTSLAAQPLFTQTKVPFFAPVTGAESLRQPFNRLAFHVRASYADEAELIV
RQLTNLGLDRIGVFYQDDAYGKAGLDAVTRALATRKLAPVATGTVARNSTNVTAAVAPLVAAQPVAIVQIGAYAASAAFV
LAARKAGYGGKFYNVSFVGTQALADALGANGAGVVVSQVVPSPYQQSRQITREFQEAIKKGGNVQANYSSMEGYLAARVF
IEGLRNAQAHASGKLTRESLVAGLESLRGSVGGFTVNFSPSDHEGSRFVEMSMLTGDGRVRT
>Mature_382_residues
MHSTRLSRRQFSAGMGAALLTGASLTRAQSDTRIVLGQSAALTGPASQLGLQFQAGAKLAFDQVNAQGGIGRRTIELRSL
DDGYEPDRCAENTRRLINEDVLALFGYVGTPTSLAAQPLFTQTKVPFFAPVTGAESLRQPFNRLAFHVRASYADEAELIV
RQLTNLGLDRIGVFYQDDAYGKAGLDAVTRALATRKLAPVATGTVARNSTNVTAAVAPLVAAQPVAIVQIGAYAASAAFV
LAARKAGYGGKFYNVSFVGTQALADALGANGAGVVVSQVVPSPYQQSRQITREFQEAIKKGGNVQANYSSMEGYLAARVF
IEGLRNAQAHASGKLTRESLVAGLESLRGSVGGFTVNFSPSDHEGSRFVEMSMLTGDGRVRT

Specific function: This Protein Is A Component Of The Leucine, Isoleucine, Valine, (Threonine) Transport System, Which Is One Of The Two Periplasmic Binding Protein-Dependent Transport Systems Of The High-Affinity Transport Of The Branched-Chain Amino Acids. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40340; Mature: 40340

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSTRLSRRQFSAGMGAALLTGASLTRAQSDTRIVLGQSAALTGPASQLGLQFQAGAKLA
CCCCHHHHHHHHCCCCHHHHHCCHHHHCCCCCEEEEECCCCCCCCHHHHCEEEECCCEEE
FDQVNAQGGIGRRTIELRSLDDGYEPDRCAENTRRLINEDVLALFGYVGTPTSLAAQPLF
HHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCH
TQTKVPFFAPVTGAESLRQPFNRLAFHVRASYADEAELIVRQLTNLGLDRIGVFYQDDAY
HCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHCEEEEECCCC
GKAGLDAVTRALATRKLAPVATGTVARNSTNVTAAVAPLVAAQPVAIVQIGAYAASAAFV
CCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHH
LAARKAGYGGKFYNVSFVGTQALADALGANGAGVVVSQVVPSPYQQSRQITREFQEAIKK
HHHHHCCCCCCEEEEEEECHHHHHHHHCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHC
GGNVQANYSSMEGYLAARVFIEGLRNAQAHASGKLTRESLVAGLESLRGSVGGFTVNFSP
CCCEEECHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCC
SDHEGSRFVEMSMLTGDGRVRT
CCCCCCEEEEEEEEECCCCCCC
>Mature Secondary Structure
MHSTRLSRRQFSAGMGAALLTGASLTRAQSDTRIVLGQSAALTGPASQLGLQFQAGAKLA
CCCCHHHHHHHHCCCCHHHHHCCHHHHCCCCCEEEEECCCCCCCCHHHHCEEEECCCEEE
FDQVNAQGGIGRRTIELRSLDDGYEPDRCAENTRRLINEDVLALFGYVGTPTSLAAQPLF
HHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCH
TQTKVPFFAPVTGAESLRQPFNRLAFHVRASYADEAELIVRQLTNLGLDRIGVFYQDDAY
HCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHCEEEEECCCC
GKAGLDAVTRALATRKLAPVATGTVARNSTNVTAAVAPLVAAQPVAIVQIGAYAASAAFV
CCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHH
LAARKAGYGGKFYNVSFVGTQALADALGANGAGVVVSQVVPSPYQQSRQITREFQEAIKK
HHHHHCCCCCCEEEEEEECHHHHHHHHCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHC
GGNVQANYSSMEGYLAARVFIEGLRNAQAHASGKLTRESLVAGLESLRGSVGGFTVNFSP
CCCEEECHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCC
SDHEGSRFVEMSMLTGDGRVRT
CCCCCCEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]

Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA