| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is livJ [C]
Identifier: 222109663
GI number: 222109663
Start: 455644
End: 456792
Strand: Direct
Name: livJ [C]
Synonym: Dtpsy_0443
Alternate gene names: 222109663
Gene position: 455644-456792 (Clockwise)
Preceding gene: 222109661
Following gene: 222109664
Centisome position: 12.0
GC content: 69.28
Gene sequence:
>1149_bases ATGCATTCAACGCGGTTGAGCCGCCGGCAATTCTCGGCAGGGATGGGCGCGGCCCTGCTGACCGGCGCATCCCTGACGCG CGCGCAGAGCGACACGCGCATTGTGCTGGGCCAATCCGCGGCCCTGACCGGGCCTGCCAGCCAATTGGGCCTGCAGTTCC AGGCGGGTGCCAAGCTGGCGTTCGACCAGGTCAACGCCCAGGGCGGCATCGGGCGGCGCACCATCGAGCTGCGCTCGCTG GACGACGGCTACGAGCCCGACCGCTGCGCCGAGAACACGCGCCGCCTGATCAATGAGGACGTGCTGGCCCTCTTTGGCTA CGTGGGCACGCCCACCAGCCTGGCCGCGCAACCACTGTTCACGCAGACTAAGGTGCCATTCTTCGCGCCCGTCACGGGCG CGGAATCCCTGCGCCAGCCGTTCAACCGCCTGGCCTTTCACGTGCGCGCCTCCTACGCCGACGAGGCCGAGCTCATCGTG CGCCAGCTCACCAACCTGGGGCTGGACCGTATCGGCGTCTTCTACCAGGACGACGCCTACGGCAAGGCTGGCCTGGACGC CGTGACCCGCGCACTGGCCACGCGCAAGCTGGCGCCCGTGGCGACCGGCACGGTGGCGCGCAACTCCACCAACGTGACGG CTGCCGTGGCGCCGCTGGTGGCGGCGCAGCCCGTGGCCATCGTGCAGATCGGTGCCTATGCCGCCAGTGCGGCGTTCGTG CTGGCCGCGCGCAAGGCGGGGTACGGCGGCAAGTTCTACAACGTTTCCTTCGTGGGCACGCAGGCGCTGGCGGATGCGCT GGGCGCCAACGGCGCGGGCGTGGTGGTGTCGCAGGTGGTGCCTTCGCCCTACCAACAGTCGCGCCAGATCACGCGTGAAT TCCAAGAGGCCATCAAGAAGGGCGGCAACGTGCAGGCCAACTACTCCAGCATGGAGGGCTACCTGGCCGCGCGCGTCTTC ATCGAGGGGTTGCGCAACGCGCAGGCGCACGCCAGCGGCAAGCTCACGCGCGAGAGCCTGGTGGCGGGGCTGGAATCCCT GCGCGGTTCGGTGGGCGGTTTTACGGTCAACTTCAGCCCGTCCGACCATGAGGGCTCGCGCTTCGTGGAGATGTCCATGC TCACCGGCGACGGCCGCGTGCGCACCTGA
Upstream 100 bases:
>100_bases ATGAACCGGGGGAAACGGGCTTCGGTAAACTTCGCGCCGGGCACTCCGTTTAACGCAGTGCCTTATTTATTTCAATAATG GTTTACTCTGAGGGTTTTCT
Downstream 100 bases:
>100_bases GCGCCCCGCGCCCGCCGGCGCCATCGGCGGGCCGCAGGGGCTTCGGGCCCGCTTCGGCGCGGATCGGGGAGCACGGCTAG ACTGTGGCATTCCCAGGACG
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MHSTRLSRRQFSAGMGAALLTGASLTRAQSDTRIVLGQSAALTGPASQLGLQFQAGAKLAFDQVNAQGGIGRRTIELRSL DDGYEPDRCAENTRRLINEDVLALFGYVGTPTSLAAQPLFTQTKVPFFAPVTGAESLRQPFNRLAFHVRASYADEAELIV RQLTNLGLDRIGVFYQDDAYGKAGLDAVTRALATRKLAPVATGTVARNSTNVTAAVAPLVAAQPVAIVQIGAYAASAAFV LAARKAGYGGKFYNVSFVGTQALADALGANGAGVVVSQVVPSPYQQSRQITREFQEAIKKGGNVQANYSSMEGYLAARVF IEGLRNAQAHASGKLTRESLVAGLESLRGSVGGFTVNFSPSDHEGSRFVEMSMLTGDGRVRT
Sequences:
>Translated_382_residues MHSTRLSRRQFSAGMGAALLTGASLTRAQSDTRIVLGQSAALTGPASQLGLQFQAGAKLAFDQVNAQGGIGRRTIELRSL DDGYEPDRCAENTRRLINEDVLALFGYVGTPTSLAAQPLFTQTKVPFFAPVTGAESLRQPFNRLAFHVRASYADEAELIV RQLTNLGLDRIGVFYQDDAYGKAGLDAVTRALATRKLAPVATGTVARNSTNVTAAVAPLVAAQPVAIVQIGAYAASAAFV LAARKAGYGGKFYNVSFVGTQALADALGANGAGVVVSQVVPSPYQQSRQITREFQEAIKKGGNVQANYSSMEGYLAARVF IEGLRNAQAHASGKLTRESLVAGLESLRGSVGGFTVNFSPSDHEGSRFVEMSMLTGDGRVRT >Mature_382_residues MHSTRLSRRQFSAGMGAALLTGASLTRAQSDTRIVLGQSAALTGPASQLGLQFQAGAKLAFDQVNAQGGIGRRTIELRSL DDGYEPDRCAENTRRLINEDVLALFGYVGTPTSLAAQPLFTQTKVPFFAPVTGAESLRQPFNRLAFHVRASYADEAELIV RQLTNLGLDRIGVFYQDDAYGKAGLDAVTRALATRKLAPVATGTVARNSTNVTAAVAPLVAAQPVAIVQIGAYAASAAFV LAARKAGYGGKFYNVSFVGTQALADALGANGAGVVVSQVVPSPYQQSRQITREFQEAIKKGGNVQANYSSMEGYLAARVF IEGLRNAQAHASGKLTRESLVAGLESLRGSVGGFTVNFSPSDHEGSRFVEMSMLTGDGRVRT
Specific function: This Protein Is A Component Of The Leucine, Isoleucine, Valine, (Threonine) Transport System, Which Is One Of The Two Periplasmic Binding Protein-Dependent Transport Systems Of The High-Affinity Transport Of The Branched-Chain Amino Acids. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40340; Mature: 40340
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSTRLSRRQFSAGMGAALLTGASLTRAQSDTRIVLGQSAALTGPASQLGLQFQAGAKLA CCCCHHHHHHHHCCCCHHHHHCCHHHHCCCCCEEEEECCCCCCCCHHHHCEEEECCCEEE FDQVNAQGGIGRRTIELRSLDDGYEPDRCAENTRRLINEDVLALFGYVGTPTSLAAQPLF HHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCH TQTKVPFFAPVTGAESLRQPFNRLAFHVRASYADEAELIVRQLTNLGLDRIGVFYQDDAY HCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHCEEEEECCCC GKAGLDAVTRALATRKLAPVATGTVARNSTNVTAAVAPLVAAQPVAIVQIGAYAASAAFV CCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHH LAARKAGYGGKFYNVSFVGTQALADALGANGAGVVVSQVVPSPYQQSRQITREFQEAIKK HHHHHCCCCCCEEEEEEECHHHHHHHHCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHC GGNVQANYSSMEGYLAARVFIEGLRNAQAHASGKLTRESLVAGLESLRGSVGGFTVNFSP CCCEEECHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCC SDHEGSRFVEMSMLTGDGRVRT CCCCCCEEEEEEEEECCCCCCC >Mature Secondary Structure MHSTRLSRRQFSAGMGAALLTGASLTRAQSDTRIVLGQSAALTGPASQLGLQFQAGAKLA CCCCHHHHHHHHCCCCHHHHHCCHHHHCCCCCEEEEECCCCCCCCHHHHCEEEECCCEEE FDQVNAQGGIGRRTIELRSLDDGYEPDRCAENTRRLINEDVLALFGYVGTPTSLAAQPLF HHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCH TQTKVPFFAPVTGAESLRQPFNRLAFHVRASYADEAELIVRQLTNLGLDRIGVFYQDDAY HCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHCEEEEECCCC GKAGLDAVTRALATRKLAPVATGTVARNSTNVTAAVAPLVAAQPVAIVQIGAYAASAAFV CCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHH LAARKAGYGGKFYNVSFVGTQALADALGANGAGVVVSQVVPSPYQQSRQITREFQEAIKK HHHHHCCCCCCEEEEEEECHHHHHHHHCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHC GGNVQANYSSMEGYLAARVFIEGLRNAQAHASGKLTRESLVAGLESLRGSVGGFTVNFSP CCCEEECHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCC SDHEGSRFVEMSMLTGDGRVRT CCCCCCEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA