| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109660
Identifier: 222109660
GI number: 222109660
Start: 451363
End: 452346
Strand: Direct
Name: 222109660
Synonym: Dtpsy_0440
Alternate gene names: NA
Gene position: 451363-452346 (Clockwise)
Preceding gene: 222109656
Following gene: 222109661
Centisome position: 11.89
GC content: 66.57
Gene sequence:
>984_bases ATGAAACTTGCTACCTACAAAGACGGATCGCGCGACGGCCAGCTTGTCGTGGTGTCGCGCGATCTGGGCACGGCCCATTA TGCGACCGGCATTGCCAGCCGCCTGCAGCAGGTGCTGGACGACTGGAACTTCATGGCGCCCCAGTTGCAGGACCTGTACG ACCAGCTCAATGCCGGCCGCGCGCGCCATCCGTTCCCCTTCGATCCGCAGCAGTGCATGGCGCCGCTGCCGCGCGCCTAC CAGTGGGCGGACGGCTCGGCCTACATCAACCACGTGGAGCTGGTGCGCAAGGCGCGCAATGCCGAGGTGCCCGCCAGCTT CTACACCGATCCGCTCATGTACCAGGGCGGCAGCGACGACTTCATCGGCCCCTGCGACGACGTGGTGGTGCCCAGCGAGG CCATGGGCATCGACTTCGAGGCCGAGATTGCCGTCGTCACCGGCGACGTGAAGATGGGCGCCAGCCCGGAGCAGGCCCTG GACGGCATCCGCCTGGTGATGCTGGCCAACGACGTCAGCCTGCGCAACCTGATCCCGGCGGAGCTGGCCAAGGGCTTCGG TTTCTTCCAGTCCAAGCCGGCGACCGCCTTCAGCCCCGTGGCGGTGACGCTGGACGAGCTGGGCGACGCCTGGCAGGGCG GGCGCGTGCACCTCACGCTGCAGTCCACCTGGAACGGCCGCAAGGTGGGCATGTGCGACGCGGGGCCGGAGATGACCTTC CACTTCGGCCAGCTCATCGCGCACATCGCCAAGACACGCAATGTGCGCGCCGGCTCCATCGTGGGCAGCGGCACGGTGAG CAACAAGGACTGGGCCAAGGGCTACAACTGCATTGCCGAAAAGCGCTGCATCGAGACCATCCAGGACGGCCAGCCCAGCA CCGAGTTCATGCGCTATGGCGACACCATCCGCATCGAGATGAAGAACAAGGCCGGCCAGAGCCTGTTCGGCGCCATTGAC CAGACCATTGCCGCGCCGCAGTAG
Upstream 100 bases:
>100_bases GGAGTTTTGTTTAGTTAAATCAATTCACTGGATCGTAATTTGTGCCAGGCGAGAGGGCTCGCGCGGCGCAGGCGATGCAT TCACCCGGAGACCCAGGCCC
Downstream 100 bases:
>100_bases TTTGAGGTCGTTTTGGGCCGTAGCGCTCGTCCATCAAGCGCGAGCAGCTATTCATAAAAGAGCAAGGAGACAACCGATGG AACGCAGAACCTTCCTGGCG
Product: fumarylacetoacetate (faa) hydrolase
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; Hydroxylase; 2-Keto-4-Pentenoate Hydratase; Aromatic Amino Acid Degradation Protein; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomerase; Fumarylacetoacetate; Fumarylacetoacetase; Fumarylacetoacetate Hydrolase Family; Fumarylacetoacetate Hydrolase Domain-Containing; Fumarylacetoacetase Protein; Hydrolase; 2-Oxopent-4-Enoate Hydratase; Potential Fumarylacetoacetate Hydrolase
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MKLATYKDGSRDGQLVVVSRDLGTAHYATGIASRLQQVLDDWNFMAPQLQDLYDQLNAGRARHPFPFDPQQCMAPLPRAY QWADGSAYINHVELVRKARNAEVPASFYTDPLMYQGGSDDFIGPCDDVVVPSEAMGIDFEAEIAVVTGDVKMGASPEQAL DGIRLVMLANDVSLRNLIPAELAKGFGFFQSKPATAFSPVAVTLDELGDAWQGGRVHLTLQSTWNGRKVGMCDAGPEMTF HFGQLIAHIAKTRNVRAGSIVGSGTVSNKDWAKGYNCIAEKRCIETIQDGQPSTEFMRYGDTIRIEMKNKAGQSLFGAID QTIAAPQ
Sequences:
>Translated_327_residues MKLATYKDGSRDGQLVVVSRDLGTAHYATGIASRLQQVLDDWNFMAPQLQDLYDQLNAGRARHPFPFDPQQCMAPLPRAY QWADGSAYINHVELVRKARNAEVPASFYTDPLMYQGGSDDFIGPCDDVVVPSEAMGIDFEAEIAVVTGDVKMGASPEQAL DGIRLVMLANDVSLRNLIPAELAKGFGFFQSKPATAFSPVAVTLDELGDAWQGGRVHLTLQSTWNGRKVGMCDAGPEMTF HFGQLIAHIAKTRNVRAGSIVGSGTVSNKDWAKGYNCIAEKRCIETIQDGQPSTEFMRYGDTIRIEMKNKAGQSLFGAID QTIAAPQ >Mature_327_residues MKLATYKDGSRDGQLVVVSRDLGTAHYATGIASRLQQVLDDWNFMAPQLQDLYDQLNAGRARHPFPFDPQQCMAPLPRAY QWADGSAYINHVELVRKARNAEVPASFYTDPLMYQGGSDDFIGPCDDVVVPSEAMGIDFEAEIAVVTGDVKMGASPEQAL DGIRLVMLANDVSLRNLIPAELAKGFGFFQSKPATAFSPVAVTLDELGDAWQGGRVHLTLQSTWNGRKVGMCDAGPEMTF HFGQLIAHIAKTRNVRAGSIVGSGTVSNKDWAKGYNCIAEKRCIETIQDGQPSTEFMRYGDTIRIEMKNKAGQSLFGAID QTIAAPQ
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35682; Mature: 35682
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLATYKDGSRDGQLVVVSRDLGTAHYATGIASRLQQVLDDWNFMAPQLQDLYDQLNAGR CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC ARHPFPFDPQQCMAPLPRAYQWADGSAYINHVELVRKARNAEVPASFYTDPLMYQGGSDD CCCCCCCCHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCHHHCCCCEEECCCCCC FIGPCDDVVVPSEAMGIDFEAEIAVVTGDVKMGASPEQALDGIRLVMLANDVSLRNLIPA CCCCCCCCCCCCHHHCCCCEEEEEEEECCEECCCCHHHHHCCEEEEEEECCCHHHHCCHH ELAKGFGFFQSKPATAFSPVAVTLDELGDAWQGGRVHLTLQSTWNGRKVGMCDAGPEMTF HHHHHCCCCCCCCCCCCCHHEEEHHHHCCCCCCCEEEEEEECCCCCCEEEECCCCCCHHH HFGQLIAHIAKTRNVRAGSIVGSGTVSNKDWAKGYNCIAEKRCIETIQDGQPSTEFMRYG HHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC DTIRIEMKNKAGQSLFGAIDQTIAAPQ CEEEEEECCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MKLATYKDGSRDGQLVVVSRDLGTAHYATGIASRLQQVLDDWNFMAPQLQDLYDQLNAGR CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC ARHPFPFDPQQCMAPLPRAYQWADGSAYINHVELVRKARNAEVPASFYTDPLMYQGGSDD CCCCCCCCHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCHHHCCCCEEECCCCCC FIGPCDDVVVPSEAMGIDFEAEIAVVTGDVKMGASPEQALDGIRLVMLANDVSLRNLIPA CCCCCCCCCCCCHHHCCCCEEEEEEEECCEECCCCHHHHHCCEEEEEEECCCHHHHCCHH ELAKGFGFFQSKPATAFSPVAVTLDELGDAWQGGRVHLTLQSTWNGRKVGMCDAGPEMTF HHHHHCCCCCCCCCCCCCHHEEEHHHHCCCCCCCEEEEEEECCCCCCEEEECCCCCCHHH HFGQLIAHIAKTRNVRAGSIVGSGTVSNKDWAKGYNCIAEKRCIETIQDGQPSTEFMRYG HHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC DTIRIEMKNKAGQSLFGAIDQTIAAPQ CEEEEEECCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA