| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109549
Identifier: 222109549
GI number: 222109549
Start: 339693
End: 340277
Strand: Direct
Name: 222109549
Synonym: Dtpsy_0329
Alternate gene names: NA
Gene position: 339693-340277 (Clockwise)
Preceding gene: 222109548
Following gene: 222109550
Centisome position: 8.95
GC content: 72.31
Gene sequence:
>585_bases ATGCGCATTCCCATTCTTTCTGTTCTCCCCGCGTTGCCCGCCGCTCGCTGGATGCTGGCCGTTATGGCGCTGGCCCTGGT CGCCGGCTGCGCCTTGCCCGCCCGGCACGCAGAAACCACGCCGCGCGCCCACGGGGTGCCGGCCGGCATGGTCAGTGTCA CCTACGCGGATCCGGCCGGCTTTGCCGAGGCGCGCGAGCAAACCCCGCACGAGCCCGCCGCGGCCCGGCGTGCCTGGATG GATGCGCTGTGCGAGCACCTGGCCGAGCGCGTGGCCGCAGCCTTGCCGGAGGGCGAGCGCGCGGAGGTGCACATCACCGA CGTGCGCCGCGCCGGTGCATTCGAGCCCGTGGCGCGGGCCACCGCCCAGGCGGTGCGCGTGGTGCGCGACGTGCATCCGC CGCGCATCGCGCTGGAGTTCAAGCGCCTCTCGCCTGACGGCCGTACCTTGGCCGAAGGCAGTCGCACGCTGCCGGGCCTG GCATTCCAGATGCGCGGGGACCGCTATCCTGGCGACAAGCTGCGCCACGAAAAGACGCTGATCGACGATTGGGTGGCGCA GGAGTTCTCCGCGCGCCGCCCATGA
Upstream 100 bases:
>100_bases TCTGTCTGACATGAACGCGGGGCACAATGCCGCGGCATTCCTCCCACCGGGCCGCCATCATGCCGGGGCCGTACGCACGG CCCACCGTACAGGAGCTTTC
Downstream 100 bases:
>100_bases CCTGTGCGCGCCGCGCGTACCTTCGCCGAAAGGAAACCTGTGACCACCGAAGCCCTGCTCGCCTATGCCCACATCATGGC CTTCCTCATGGCCGCCACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MRIPILSVLPALPAARWMLAVMALALVAGCALPARHAETTPRAHGVPAGMVSVTYADPAGFAEAREQTPHEPAAARRAWM DALCEHLAERVAAALPEGERAEVHITDVRRAGAFEPVARATAQAVRVVRDVHPPRIALEFKRLSPDGRTLAEGSRTLPGL AFQMRGDRYPGDKLRHEKTLIDDWVAQEFSARRP
Sequences:
>Translated_194_residues MRIPILSVLPALPAARWMLAVMALALVAGCALPARHAETTPRAHGVPAGMVSVTYADPAGFAEAREQTPHEPAAARRAWM DALCEHLAERVAAALPEGERAEVHITDVRRAGAFEPVARATAQAVRVVRDVHPPRIALEFKRLSPDGRTLAEGSRTLPGL AFQMRGDRYPGDKLRHEKTLIDDWVAQEFSARRP >Mature_194_residues MRIPILSVLPALPAARWMLAVMALALVAGCALPARHAETTPRAHGVPAGMVSVTYADPAGFAEAREQTPHEPAAARRAWM DALCEHLAERVAAALPEGERAEVHITDVRRAGAFEPVARATAQAVRVVRDVHPPRIALEFKRLSPDGRTLAEGSRTLPGL AFQMRGDRYPGDKLRHEKTLIDDWVAQEFSARRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21156; Mature: 21156
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIPILSVLPALPAARWMLAVMALALVAGCALPARHAETTPRAHGVPAGMVSVTYADPAG CCCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCC FAEAREQTPHEPAAARRAWMDALCEHLAERVAAALPEGERAEVHITDVRRAGAFEPVARA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCCHHHHH TAQAVRVVRDVHPPRIALEFKRLSPDGRTLAEGSRTLPGLAFQMRGDRYPGDKLRHEKTL HHHHHHHHHHCCCCCEEEEEECCCCCCCCHHCCCCCCCCEEEEECCCCCCCHHHHHHHHH IDDWVAQEFSARRP HHHHHHHHHHCCCC >Mature Secondary Structure MRIPILSVLPALPAARWMLAVMALALVAGCALPARHAETTPRAHGVPAGMVSVTYADPAG CCCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCC FAEAREQTPHEPAAARRAWMDALCEHLAERVAAALPEGERAEVHITDVRRAGAFEPVARA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCCHHHHH TAQAVRVVRDVHPPRIALEFKRLSPDGRTLAEGSRTLPGLAFQMRGDRYPGDKLRHEKTL HHHHHHHHHHCCCCCEEEEEECCCCCCCCHHCCCCCCCCEEEEECCCCCCCHHHHHHHHH IDDWVAQEFSARRP HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA