Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

Click here to switch to the map view.

The map label for this gene is 222109550

Identifier: 222109550

GI number: 222109550

Start: 340317

End: 340772

Strand: Direct

Name: 222109550

Synonym: Dtpsy_0330

Alternate gene names: NA

Gene position: 340317-340772 (Clockwise)

Preceding gene: 222109549

Following gene: 222109552

Centisome position: 8.96

GC content: 69.08

Gene sequence:

>456_bases
GTGACCACCGAAGCCCTGCTCGCCTATGCCCACATCATGGCCTTCCTCATGGCCGCCACCTTCCTTGCCAGCGAGACCGC
GCTGTGCCGCAAGGAGTGGATGAACGCGGCCGCAGTCGAGCGGCTGGCGCGGGTGGACATGCTGTACGGTATCTCGGCGC
TGCTGGTGCTGGCCACCGGGCTGGCGCGCACCTGGTGGGGCATAAAGGGCGGGGCGTGGTACTGGTCGCAGCCGCTGCTG
CATGCCAAGGTCACGTTGTTCGTGGTGATCGGGCTGATGTCCATCGTCCCGACCATGCGCTTCCTGCGCTGGCGCCGCGC
GGTGCGCGCCGGCGGCGCGCTGCCCTCGGATGACCAGGTGCGCAGCACGCGCCGTCTGGTGATGATCGAGGCCCATCTGC
TGGCGCTGATTCCGCTGTTGGCCGTCTTCCTGGCACGCGGCGTGGGCACGCGCTGA

Upstream 100 bases:

>100_bases
CCACGAAAAGACGCTGATCGACGATTGGGTGGCGCAGGAGTTCTCCGCGCGCCGCCCATGACCTGTGCGCGCCGCGCGTA
CCTTCGCCGAAAGGAAACCT

Downstream 100 bases:

>100_bases
GCGCCGAGGGAAGAGCAAAAAAAGAAACCCCGCGGGCGGCAGGCGCGCGGGGTTTGCTCGTGCAGGCCCGATGGGCGGGC
CCGTGCGGTGCGTCGGTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Inner Membrane Protein

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MTTEALLAYAHIMAFLMAATFLASETALCRKEWMNAAAVERLARVDMLYGISALLVLATGLARTWWGIKGGAWYWSQPLL
HAKVTLFVVIGLMSIVPTMRFLRWRRAVRAGGALPSDDQVRSTRRLVMIEAHLLALIPLLAVFLARGVGTR

Sequences:

>Translated_151_residues
MTTEALLAYAHIMAFLMAATFLASETALCRKEWMNAAAVERLARVDMLYGISALLVLATGLARTWWGIKGGAWYWSQPLL
HAKVTLFVVIGLMSIVPTMRFLRWRRAVRAGGALPSDDQVRSTRRLVMIEAHLLALIPLLAVFLARGVGTR
>Mature_150_residues
TTEALLAYAHIMAFLMAATFLASETALCRKEWMNAAAVERLARVDMLYGISALLVLATGLARTWWGIKGGAWYWSQPLLH
AKVTLFVVIGLMSIVPTMRFLRWRRAVRAGGALPSDDQVRSTRRLVMIEAHLLALIPLLAVFLARGVGTR

Specific function: Unknown

COG id: COG3556

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16753; Mature: 16622

Theoretical pI: Translated: 11.59; Mature: 11.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTEALLAYAHIMAFLMAATFLASETALCRKEWMNAAAVERLARVDMLYGISALLVLATG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LARTWWGIKGGAWYWSQPLLHAKVTLFVVIGLMSIVPTMRFLRWRRAVRAGGALPSDDQV
HHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
RSTRRLVMIEAHLLALIPLLAVFLARGVGTR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TTEALLAYAHIMAFLMAATFLASETALCRKEWMNAAAVERLARVDMLYGISALLVLATG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LARTWWGIKGGAWYWSQPLLHAKVTLFVVIGLMSIVPTMRFLRWRRAVRAGGALPSDDQV
HHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
RSTRRLVMIEAHLLALIPLLAVFLARGVGTR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA