| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109446
Identifier: 222109446
GI number: 222109446
Start: 245440
End: 246480
Strand: Direct
Name: 222109446
Synonym: Dtpsy_0226
Alternate gene names: NA
Gene position: 245440-246480 (Clockwise)
Preceding gene: 222109445
Following gene: 222109448
Centisome position: 6.46
GC content: 70.32
Gene sequence:
>1041_bases ATGAGCGGGGCATCCACTTCTTTGCCGCTGGACGCGCTGGGCGACTACCTGCGCGCGCAGGGCCTGGCGGGCACGGGGCC GCTCGCGGCCACGGTACTGGCGGGCGGGCAGTCCAACCCCACCTTTCGCATCACCACGGCGGAAGGCCGCAATTACGTGC TGCGCAAGAAGCCCCCGGGGGCGCTGATCGCATCGGCCCACGCCATCGACCGCGAGTACCGCGTGATGCGCGCGCTGCAG GACACGGCCGTGCCCGTGCCGCGCATGCTGGCCTATTGCGACGATGCGGCGCTGCTGGGCACGCCGTTCTACGTGATGGA GTTTCTGCAGGGCCGAGTGTTCATGGACCAGTCGCTGCCCGGCGTGGAACCGGCCGAGCGCACCGCCATCTACCGCGAGA TGAACCGCGTGATCGCCGCGCTGCACGCCGTGGACTACGCCGCCGTGGGCCTGGCCGACTACGGCAAACCTGGCAACTAC GTGGGCCGCCAGGTCGCGCGCTGGTCGCGCCAGTGCCGCGAGGCCACGGTGCCCGTCACGCCGGCGATGGAGCGGCTTAT GGACTGGTTGCCCCAGCACCTGCCGCAGGACGACGAAACCACGCTGGTGCATGGCGACTACCGCCTGGACAACCTGGTGT TCCACCCCAATGAGCCGCGCGTGATCGGCGTGCTGGACTGGGAACTGTCCACGCTGGGCCACCCGCTGGCCGACCTGGCC TACCAGTGCATGGCCTGGCGCATCCCGCCCAGCCTGTGGCGCGGCATTGGCGGGCTCGATCTCGCGGCGCTGGGCATCCC CCCGGAAAGCGAGTACGTGGGCTGGTACGAGCAGGCCACCGGGCGCCAGGCGGCGGAGCACTGGGATTTCTACCTGGCCT ACAACCTGTTCCGCATGGCGGCGATCCTGCACGGAATCGCCCAGCGTGCGCAGGACGGCAATGCCGCGGCCGCCGATGCG GTGGAGACAGGCGCCAAGGCCGGACCGCTGGCCGAACTGGGCTGGGAGGCGGCGCAGCGTTACATGGCCGGGCGCAAGTA A
Upstream 100 bases:
>100_bases CGGACCTGGACGGGCCGCTGCTGTTGCTGGCGTCCGACGCCGGCGCCGCCATGTCGGGCGCCACGGTGGCGGTCGACGGC GCGCACCTGGTGAGTTCGCT
Downstream 100 bases:
>100_bases GCAAGCTGCTATGAAAATAGAAGCTGTTCGCGCTGGATACGTAAGCGTTACCATGCGAAAGTGCGCGGAAAACGCCGAAC ACCAAGCGCGAGCAGCTCCT
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Phosphotransferase Family; Acyl-CoA Dehydrogenase; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-Coa Dehydrogenase Fade; Acyl-CoA Dehydrogenase Family Member
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MSGASTSLPLDALGDYLRAQGLAGTGPLAATVLAGGQSNPTFRITTAEGRNYVLRKKPPGALIASAHAIDREYRVMRALQ DTAVPVPRMLAYCDDAALLGTPFYVMEFLQGRVFMDQSLPGVEPAERTAIYREMNRVIAALHAVDYAAVGLADYGKPGNY VGRQVARWSRQCREATVPVTPAMERLMDWLPQHLPQDDETTLVHGDYRLDNLVFHPNEPRVIGVLDWELSTLGHPLADLA YQCMAWRIPPSLWRGIGGLDLAALGIPPESEYVGWYEQATGRQAAEHWDFYLAYNLFRMAAILHGIAQRAQDGNAAAADA VETGAKAGPLAELGWEAAQRYMAGRK
Sequences:
>Translated_346_residues MSGASTSLPLDALGDYLRAQGLAGTGPLAATVLAGGQSNPTFRITTAEGRNYVLRKKPPGALIASAHAIDREYRVMRALQ DTAVPVPRMLAYCDDAALLGTPFYVMEFLQGRVFMDQSLPGVEPAERTAIYREMNRVIAALHAVDYAAVGLADYGKPGNY VGRQVARWSRQCREATVPVTPAMERLMDWLPQHLPQDDETTLVHGDYRLDNLVFHPNEPRVIGVLDWELSTLGHPLADLA YQCMAWRIPPSLWRGIGGLDLAALGIPPESEYVGWYEQATGRQAAEHWDFYLAYNLFRMAAILHGIAQRAQDGNAAAADA VETGAKAGPLAELGWEAAQRYMAGRK >Mature_345_residues SGASTSLPLDALGDYLRAQGLAGTGPLAATVLAGGQSNPTFRITTAEGRNYVLRKKPPGALIASAHAIDREYRVMRALQD TAVPVPRMLAYCDDAALLGTPFYVMEFLQGRVFMDQSLPGVEPAERTAIYREMNRVIAALHAVDYAAVGLADYGKPGNYV GRQVARWSRQCREATVPVTPAMERLMDWLPQHLPQDDETTLVHGDYRLDNLVFHPNEPRVIGVLDWELSTLGHPLADLAY QCMAWRIPPSLWRGIGGLDLAALGIPPESEYVGWYEQATGRQAAEHWDFYLAYNLFRMAAILHGIAQRAQDGNAAAADAV ETGAKAGPLAELGWEAAQRYMAGRK
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI48976061, Length=339, Percent_Identity=50.7374631268437, Blast_Score=353, Evalue=9e-98, Organism=Homo sapiens, GI211971008, Length=339, Percent_Identity=50.7374631268437, Blast_Score=353, Evalue=1e-97, Organism=Homo sapiens, GI38505218, Length=333, Percent_Identity=41.1411411411411, Blast_Score=268, Evalue=5e-72, Organism=Caenorhabditis elegans, GI17562446, Length=347, Percent_Identity=38.6167146974063, Blast_Score=253, Evalue=1e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37862; Mature: 37730
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGASTSLPLDALGDYLRAQGLAGTGPLAATVLAGGQSNPTFRITTAEGRNYVLRKKPPG CCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHEECCCCCCCEEEEECCCCCEEEEECCCC ALIASAHAIDREYRVMRALQDTAVPVPRMLAYCDDAALLGTPFYVMEFLQGRVFMDQSLP CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHCCHHHHHHHHCCCEEECCCCC GVEPAERTAIYREMNRVIAALHAVDYAAVGLADYGKPGNYVGRQVARWSRQCREATVPVT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC PAMERLMDWLPQHLPQDDETTLVHGDYRLDNLVFHPNEPRVIGVLDWELSTLGHPLADLA HHHHHHHHHHHHHCCCCCCCEEEECCEEECCEEECCCCCCEEEEEECCHHHHCCCHHHHH YQCMAWRIPPSLWRGIGGLDLAALGIPPESEYVGWYEQATGRQAAEHWDFYLAYNLFRMA HHHHHHCCCHHHHHCCCCCCEEEECCCCCHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHH AILHGIAQRAQDGNAAAADAVETGAKAGPLAELGWEAAQRYMAGRK HHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure SGASTSLPLDALGDYLRAQGLAGTGPLAATVLAGGQSNPTFRITTAEGRNYVLRKKPPG CCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHEECCCCCCCEEEEECCCCCEEEEECCCC ALIASAHAIDREYRVMRALQDTAVPVPRMLAYCDDAALLGTPFYVMEFLQGRVFMDQSLP CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHCCHHHHHHHHCCCEEECCCCC GVEPAERTAIYREMNRVIAALHAVDYAAVGLADYGKPGNYVGRQVARWSRQCREATVPVT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC PAMERLMDWLPQHLPQDDETTLVHGDYRLDNLVFHPNEPRVIGVLDWELSTLGHPLADLA HHHHHHHHHHHHHCCCCCCCEEEECCEEECCEEECCCCCCEEEEEECCHHHHCCCHHHHH YQCMAWRIPPSLWRGIGGLDLAALGIPPESEYVGWYEQATGRQAAEHWDFYLAYNLFRMA HHHHHHCCCHHHHHCCCCCCEEEECCCCCHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHH AILHGIAQRAQDGNAAAADAVETGAKAGPLAELGWEAAQRYMAGRK HHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA