BacMap

Definition	Acidovorax ebreus TPSY chromosome, complete genome.
Accession	NC_011992
Length	3,796,573

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The map label for this gene is fabG [H]

Identifier: 222109445

GI number: 222109445

Start: 244670

End: 245443

Strand: Direct

Name: fabG [H]

Synonym: Dtpsy_0225

Alternate gene names: 222109445

Gene position: 244670-245443 (Clockwise)

Preceding gene: 222109444

Following gene: 222109446

Centisome position: 6.44

GC content: 71.83

Gene sequence:

>774_bases
ATGAGCGATGCATTGACGCCCTTTCGCCTGGACGGCCGCGTGGTGCTGGTCACCGGCGCATCGAGTGGCCTGGGCCAGCA
TTTCGCGCGGCTGCTGGCTTCGGTGGGCGCTCGCATAGCCGTCGCCGCGCGCCGGGCCGACAAGCTGCAGGGCGTGGTGG
ATGACATCGCCGCCGCGGGCGGCGAGGCGCGGGCGTTCACGCTGGACGTGACGGACGCCGCCAGCGTGCGCGCGTGCCTG
GACGCCGTGGGCGCCTGGGGCGTGCCCGATGTGGTCATCAACAACGCGGGCGTCACGGTGACGCGCCCGCTGCTGGAGCA
GAGCGAAGAAGACTTCGACCAGGTGCTGGACACCAACCTCAAGGGCTGCTGGCTTGTCGCCACCGAGGCGGCGCGCCGCA
TGGTGGCCGCGGACAAGGGCGGCGCGATCGTCAATGTGGCTTCCATCCTGGGCGAGCGCGTGGCGGGCGGCGTGGCGCCG
TATGCAATCTCCAAGGCCGGCGTGGTCCAGGCCACCAAGGCCATGGCGCTGGAGCTGGCGCGCCACCGCATCCGCGTGAA
CGCGCTGCTGCCCGGCTACGTGGTGACCGACCTGAACCGCGACTTCCTCACCAGCGAGGCGGGCGACAAGCTGCGCAGCC
GCATCCCCAGCCGGCGCTTTGGCGAGCTGACGGACCTGGACGGGCCGCTGCTGTTGCTGGCGTCCGACGCCGGCGCCGCC
ATGTCGGGCGCCACGGTGGCGGTCGACGGCGCGCACCTGGTGAGTTCGCTATGA

Upstream 100 bases:

>100_bases
CCTTTCGCATCTACGACGGCCCGAGCGAGGTGCACCGCTGGAGCATGGCGCGCAAGCTGGTGCACATGGCCGAGAACGCC
GCCGCAGCCAAGGAGGTGGC

Downstream 100 bases:

>100_bases
GCGGGGCATCCACTTCTTTGCCGCTGGACGCGCTGGGCGACTACCTGCGCGCGCAGGGCCTGGCGGGCACGGGGCCGCTC
GCGGCCACGGTACTGGCGGG

Product: short-chain dehydrogenase/reductase sdr

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSDALTPFRLDGRVVLVTGASSGLGQHFARLLASVGARIAVAARRADKLQGVVDDIAAAGGEARAFTLDVTDAASVRACL
DAVGAWGVPDVVINNAGVTVTRPLLEQSEEDFDQVLDTNLKGCWLVATEAARRMVAADKGGAIVNVASILGERVAGGVAP
YAISKAGVVQATKAMALELARHRIRVNALLPGYVVTDLNRDFLTSEAGDKLRSRIPSRRFGELTDLDGPLLLLASDAGAA
MSGATVAVDGAHLVSSL

Sequences:

>Translated_257_residues
MSDALTPFRLDGRVVLVTGASSGLGQHFARLLASVGARIAVAARRADKLQGVVDDIAAAGGEARAFTLDVTDAASVRACL
DAVGAWGVPDVVINNAGVTVTRPLLEQSEEDFDQVLDTNLKGCWLVATEAARRMVAADKGGAIVNVASILGERVAGGVAP
YAISKAGVVQATKAMALELARHRIRVNALLPGYVVTDLNRDFLTSEAGDKLRSRIPSRRFGELTDLDGPLLLLASDAGAA
MSGATVAVDGAHLVSSL
>Mature_256_residues
SDALTPFRLDGRVVLVTGASSGLGQHFARLLASVGARIAVAARRADKLQGVVDDIAAAGGEARAFTLDVTDAASVRACLD
AVGAWGVPDVVINNAGVTVTRPLLEQSEEDFDQVLDTNLKGCWLVATEAARRMVAADKGGAIVNVASILGERVAGGVAPY
AISKAGVVQATKAMALELARHRIRVNALLPGYVVTDLNRDFLTSEAGDKLRSRIPSRRFGELTDLDGPLLLLASDAGAAM
SGATVAVDGAHLVSSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=251, Percent_Identity=35.8565737051793, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI40254992, Length=239, Percent_Identity=33.8912133891213, Blast_Score=118, Evalue=6e-27,
Organism=Homo sapiens, GI7705925, Length=242, Percent_Identity=33.0578512396694, Blast_Score=117, Evalue=9e-27,
Organism=Homo sapiens, GI4503301, Length=254, Percent_Identity=30.3149606299213, Blast_Score=107, Evalue=7e-24,
Organism=Homo sapiens, GI32483357, Length=247, Percent_Identity=32.7935222672065, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI19923817, Length=259, Percent_Identity=26.6409266409266, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=30.4, Blast_Score=88, Evalue=9e-18,
Organism=Homo sapiens, GI5031737, Length=247, Percent_Identity=28.7449392712551, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI4504505, Length=199, Percent_Identity=34.6733668341709, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI209862901, Length=206, Percent_Identity=29.6116504854369, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI19923983, Length=206, Percent_Identity=29.6116504854369, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI20149619, Length=204, Percent_Identity=26.4705882352941, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI10190704, Length=252, Percent_Identity=28.1746031746032, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI150247226, Length=199, Percent_Identity=31.1557788944724, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI33667109, Length=196, Percent_Identity=29.5918367346939, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI66933014, Length=249, Percent_Identity=29.3172690763052, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI4758504, Length=266, Percent_Identity=31.5789473684211, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI40254986, Length=205, Percent_Identity=30.2439024390244, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI126723191, Length=185, Percent_Identity=32.972972972973, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI19743808, Length=201, Percent_Identity=31.3432835820896, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI31542939, Length=199, Percent_Identity=28.1407035175879, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI157739938, Length=191, Percent_Identity=25.6544502617801, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1789208, Length=251, Percent_Identity=37.0517928286853, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1787335, Length=244, Percent_Identity=31.9672131147541, Blast_Score=130, Evalue=6e-32,
Organism=Escherichia coli, GI1790717, Length=250, Percent_Identity=32.4, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI87082160, Length=257, Percent_Identity=32.295719844358, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=33.0677290836653, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1787905, Length=244, Percent_Identity=31.9672131147541, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=33.0612244897959, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1788459, Length=248, Percent_Identity=29.0322580645161, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=28.2786885245902, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=27.734375, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787820, Length=183, Percent_Identity=30.6010928961749, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1786812, Length=261, Percent_Identity=26.4367816091954, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787526, Length=210, Percent_Identity=28.0952380952381, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789378, Length=251, Percent_Identity=26.6932270916335, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17555706, Length=242, Percent_Identity=34.7107438016529, Blast_Score=134, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI25147288, Length=242, Percent_Identity=33.8842975206612, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17561272, Length=256, Percent_Identity=35.15625, Blast_Score=127, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI17536025, Length=251, Percent_Identity=30.6772908366534, Blast_Score=113, Evalue=8e-26,
Organism=Caenorhabditis elegans, GI17536651, Length=250, Percent_Identity=30.4, Blast_Score=111, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI115534694, Length=248, Percent_Identity=29.0322580645161, Blast_Score=102, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17560676, Length=253, Percent_Identity=28.0632411067194, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71994600, Length=247, Percent_Identity=30.7692307692308, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17562910, Length=266, Percent_Identity=30.0751879699248, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=32.5301204819277, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17562906, Length=260, Percent_Identity=28.8461538461538, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI193204405, Length=197, Percent_Identity=31.4720812182741, Blast_Score=94, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17560150, Length=219, Percent_Identity=30.5936073059361, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=28.2442748091603, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17560220, Length=197, Percent_Identity=30.4568527918782, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17562908, Length=222, Percent_Identity=31.0810810810811, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17531453, Length=223, Percent_Identity=29.1479820627803, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17538480, Length=261, Percent_Identity=28.3524904214559, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17562990, Length=222, Percent_Identity=29.7297297297297, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17560332, Length=203, Percent_Identity=31.5270935960591, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17568967, Length=196, Percent_Identity=33.1632653061224, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17563726, Length=197, Percent_Identity=29.4416243654822, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17551412, Length=199, Percent_Identity=29.6482412060301, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71982365, Length=219, Percent_Identity=31.5068493150685, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17562904, Length=221, Percent_Identity=27.6018099547511, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17561402, Length=249, Percent_Identity=25.3012048192771, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI72000259, Length=269, Percent_Identity=28.996282527881, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI193203117, Length=193, Percent_Identity=26.9430051813472, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17508651, Length=244, Percent_Identity=27.8688524590164, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI193203115, Length=190, Percent_Identity=27.3684210526316, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17564282, Length=193, Percent_Identity=26.9430051813472, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17555612, Length=250, Percent_Identity=29.2, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17544670, Length=263, Percent_Identity=28.8973384030418, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI71997099, Length=263, Percent_Identity=27.7566539923954, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17508895, Length=190, Percent_Identity=25.2631578947368, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17565030, Length=262, Percent_Identity=28.6259541984733, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=200, Percent_Identity=30.5, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322861, Length=188, Percent_Identity=32.9787234042553, Blast_Score=84, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6323882, Length=198, Percent_Identity=31.8181818181818, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24643142, Length=247, Percent_Identity=34.412955465587, Blast_Score=124, Evalue=6e-29,
Organism=Drosophila melanogaster, GI28571526, Length=245, Percent_Identity=35.9183673469388, Blast_Score=123, Evalue=1e-28,
Organism=Drosophila melanogaster, GI23397609, Length=247, Percent_Identity=36.4372469635627, Blast_Score=121, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24639444, Length=244, Percent_Identity=34.0163934426229, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI21357041, Length=245, Percent_Identity=34.6938775510204, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24644339, Length=246, Percent_Identity=34.1463414634146, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI18859837, Length=202, Percent_Identity=35.6435643564356, Blast_Score=98, Evalue=6e-21,
Organism=Drosophila melanogaster, GI21355319, Length=248, Percent_Identity=27.0161290322581, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24584752, Length=186, Percent_Identity=32.7956989247312, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI116007236, Length=201, Percent_Identity=30.8457711442786, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24641232, Length=214, Percent_Identity=31.3084112149533, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24644337, Length=258, Percent_Identity=28.2945736434109, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21357673, Length=193, Percent_Identity=31.6062176165803, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21358495, Length=202, Percent_Identity=30.6930693069307, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI116007238, Length=217, Percent_Identity=31.7972350230415, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24584744, Length=193, Percent_Identity=29.5336787564767, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28574402, Length=193, Percent_Identity=29.5336787564767, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI161076933, Length=191, Percent_Identity=27.7486910994764, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24584748, Length=191, Percent_Identity=27.7486910994764, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI28571387, Length=217, Percent_Identity=28.110599078341, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI116007234, Length=201, Percent_Identity=30.3482587064677, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI281364892, Length=196, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26553; Mature: 26421

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDALTPFRLDGRVVLVTGASSGLGQHFARLLASVGARIAVAARRADKLQGVVDDIAAAG
CCCCCCCEEECCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
GEARAFTLDVTDAASVRACLDAVGAWGVPDVVINNAGVTVTRPLLEQSEEDFDQVLDTNL
CCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEECCCCCEEEHHHHHCCHHHHHHHHHCCC
KGCWLVATEAARRMVAADKGGAIVNVASILGERVAGGVAPYAISKAGVVQATKAMALELA
CCEEEEEHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHH
RHRIRVNALLPGYVVTDLNRDFLTSEAGDKLRSRIPSRRFGELTDLDGPLLLLASDAGAA
HHHEEEEEECCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCC
MSGATVAVDGAHLVSSL
CCCCEEEECHHHHHHCC
>Mature Secondary Structure 
SDALTPFRLDGRVVLVTGASSGLGQHFARLLASVGARIAVAARRADKLQGVVDDIAAAG
CCCCCCEEECCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
GEARAFTLDVTDAASVRACLDAVGAWGVPDVVINNAGVTVTRPLLEQSEEDFDQVLDTNL
CCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEECCCCCEEEHHHHHCCHHHHHHHHHCCC
KGCWLVATEAARRMVAADKGGAIVNVASILGERVAGGVAPYAISKAGVVQATKAMALELA
CCEEEEEHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHH
RHRIRVNALLPGYVVTDLNRDFLTSEAGDKLRSRIPSRRFGELTDLDGPLLLLASDAGAA
HHHEEEEEECCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCC
MSGATVAVDGAHLVSSL
CCCCEEEECHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA