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The map label for this gene is bbsG [H]

Identifier: 222109444

GI number: 222109444

Start: 243483

End: 244673

Strand: Direct

Name: bbsG [H]

Synonym: Dtpsy_0224

Alternate gene names: 222109444

Gene position: 243483-244673 (Clockwise)

Preceding gene: 222109439

Following gene: 222109445

Centisome position: 6.41

GC content: 68.18

Gene sequence:

>1191_bases
ATGGACTTTTCTCTCTCCCCTGAACTGCGCGCATTGCGCGACAAGGTGCGGCAATTCATCGCCGAACAGGTGATCCCCCT
GGAAAACGACGAGCGCCAGTCCCACCACGGCCCGAGCGAGGCGTTGCGTGACGAGCTGGTGGCGCGCGGCAAGGCGGCAG
GGCTGCTCACGCCCCATGCTTCCCGCGCCATGGGCGGTATGGGCCTCACGCATGTGGAAAAGGCCGTGGTGTTCGAGGAG
GCCGGCTACTCCTGGCTGGGCCCCACGGCACTCAACATTCACGCGCCGGACGAGGGCAACATCCACCTGATGGAAGAGGT
GGCCACGCCCGCGCAGAAGGAGCGCTGGCTGCGCGGCCAGGTGGCCGGCGACTGGCGCTCGTGCTTCGCCATGACCGAGC
CCGCGCCCGGCGCGGGGGCGGACCCGTCCATGCTGGACACCACGGCCGTGCGGGATGGCGACGATTACGTGATCAACGGC
CGCAAGTGGTTCATCACCGGCGCAGAAGGCGCGCACTACGCCATCGTCATGGCGCGCATGGAGGACGGATCAGCCACCAT
GTTCCTGACCGACATGGGCCGGCCCGGCATCGTGCTGGAGCGCAACATGGACGCCATGGACAGTTGTTTCACCGGCGGCC
ACGGCGTGCTGCGCTTTGACAACCTGCGCGTGCCGGCCAGCGATGTGCTGGGCGAAATCGGCAAGGGCTTTCGCTACGCG
CAGGTGCGCCTGGCGCCGGCGCGCCTGACGCACTGCATGCGCTGGCTGGGCCAGGCGCGCCGCGCGCACGATACGGCGCT
GGAATACGCGCGCAAACGCCAGGCCTTCGGCAAGCCGCTGGCCGAGCATGAAGGCGTGGGCTACATGCTGGCCGACAACG
ACATGGACCTGCACACCGCGCGGCTGCACATCTGGCACACGGCGTGGCTGCTGGATCAGGGCGAGAAGTGCAACTTCGAA
TCGAGCCGCGCCAAGGTGGTGTGTTCCGAGGCCGAGTGGCGGGTGGTGGACCGCAGCGTGCAGATCCTGGGCGGGCAGGG
CGTGACGGGCGAGACGCCGGTGATGCGCATCTTCACCGACATGCGGGCCTTTCGCATCTACGACGGCCCGAGCGAGGTGC
ACCGCTGGAGCATGGCGCGCAAGCTGGTGCACATGGCCGAGAACGCCGCCGCAGCCAAGGAGGTGGCATGA

Upstream 100 bases:

>100_bases
GCAAACGTTAGCACAACGGCAGGGGTATTGTTTTCAAAATTGTTCAACAATATCATCCGCAATATGCCAGGTGTTCTGGT
TGACCTTCTACGAGGCCCGC

Downstream 100 bases:

>100_bases
GCGATGCATTGACGCCCTTTCGCCTGGACGGCCGCGTGGTGCTGGTCACCGGCGCATCGAGTGGCCTGGGCCAGCATTTC
GCGCGGCTGCTGGCTTCGGT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MDFSLSPELRALRDKVRQFIAEQVIPLENDERQSHHGPSEALRDELVARGKAAGLLTPHASRAMGGMGLTHVEKAVVFEE
AGYSWLGPTALNIHAPDEGNIHLMEEVATPAQKERWLRGQVAGDWRSCFAMTEPAPGAGADPSMLDTTAVRDGDDYVING
RKWFITGAEGAHYAIVMARMEDGSATMFLTDMGRPGIVLERNMDAMDSCFTGGHGVLRFDNLRVPASDVLGEIGKGFRYA
QVRLAPARLTHCMRWLGQARRAHDTALEYARKRQAFGKPLAEHEGVGYMLADNDMDLHTARLHIWHTAWLLDQGEKCNFE
SSRAKVVCSEAEWRVVDRSVQILGGQGVTGETPVMRIFTDMRAFRIYDGPSEVHRWSMARKLVHMAENAAAAKEVA

Sequences:

>Translated_396_residues
MDFSLSPELRALRDKVRQFIAEQVIPLENDERQSHHGPSEALRDELVARGKAAGLLTPHASRAMGGMGLTHVEKAVVFEE
AGYSWLGPTALNIHAPDEGNIHLMEEVATPAQKERWLRGQVAGDWRSCFAMTEPAPGAGADPSMLDTTAVRDGDDYVING
RKWFITGAEGAHYAIVMARMEDGSATMFLTDMGRPGIVLERNMDAMDSCFTGGHGVLRFDNLRVPASDVLGEIGKGFRYA
QVRLAPARLTHCMRWLGQARRAHDTALEYARKRQAFGKPLAEHEGVGYMLADNDMDLHTARLHIWHTAWLLDQGEKCNFE
SSRAKVVCSEAEWRVVDRSVQILGGQGVTGETPVMRIFTDMRAFRIYDGPSEVHRWSMARKLVHMAENAAAAKEVA
>Mature_396_residues
MDFSLSPELRALRDKVRQFIAEQVIPLENDERQSHHGPSEALRDELVARGKAAGLLTPHASRAMGGMGLTHVEKAVVFEE
AGYSWLGPTALNIHAPDEGNIHLMEEVATPAQKERWLRGQVAGDWRSCFAMTEPAPGAGADPSMLDTTAVRDGDDYVING
RKWFITGAEGAHYAIVMARMEDGSATMFLTDMGRPGIVLERNMDAMDSCFTGGHGVLRFDNLRVPASDVLGEIGKGFRYA
QVRLAPARLTHCMRWLGQARRAHDTALEYARKRQAFGKPLAEHEGVGYMLADNDMDLHTARLHIWHTAWLLDQGEKCNFE
SSRAKVVCSEAEWRVVDRSVQILGGQGVTGETPVMRIFTDMRAFRIYDGPSEVHRWSMARKLVHMAENAAAAKEVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI211971008, Length=400, Percent_Identity=36, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI48976061, Length=400, Percent_Identity=36, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI38505218, Length=389, Percent_Identity=32.9048843187661, Blast_Score=202, Evalue=7e-52,
Organism=Homo sapiens, GI4557233, Length=378, Percent_Identity=30.952380952381, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI4557231, Length=396, Percent_Identity=28.2828282828283, Blast_Score=172, Evalue=4e-43,
Organism=Homo sapiens, GI187960098, Length=396, Percent_Identity=28.2828282828283, Blast_Score=172, Evalue=4e-43,
Organism=Homo sapiens, GI4501859, Length=396, Percent_Identity=27.5252525252525, Blast_Score=143, Evalue=2e-34,
Organism=Homo sapiens, GI4501857, Length=393, Percent_Identity=28.7531806615776, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI21361497, Length=383, Percent_Identity=27.154046997389, Blast_Score=128, Evalue=8e-30,
Organism=Homo sapiens, GI226958412, Length=387, Percent_Identity=26.3565891472868, Blast_Score=128, Evalue=8e-30,
Organism=Homo sapiens, GI226958414, Length=383, Percent_Identity=25.5874673629243, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI76496475, Length=387, Percent_Identity=27.6485788113695, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI4557235, Length=387, Percent_Identity=27.6485788113695, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI7656849, Length=387, Percent_Identity=24.2894056847545, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI4503943, Length=382, Percent_Identity=24.869109947644, Blast_Score=95, Evalue=9e-20,
Organism=Homo sapiens, GI7669494, Length=367, Percent_Identity=25.0681198910082, Blast_Score=88, Evalue=1e-17,
Organism=Escherichia coli, GI87081958, Length=400, Percent_Identity=29, Blast_Score=131, Evalue=8e-32,
Organism=Escherichia coli, GI1786223, Length=397, Percent_Identity=28.7153652392947, Blast_Score=129, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI17570075, Length=396, Percent_Identity=31.3131313131313, Blast_Score=188, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI17562446, Length=326, Percent_Identity=35.2760736196319, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17569725, Length=402, Percent_Identity=30.3482587064677, Blast_Score=175, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI17534899, Length=399, Percent_Identity=28.3208020050125, Blast_Score=164, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI17508101, Length=388, Percent_Identity=27.8350515463918, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17506239, Length=379, Percent_Identity=27.4406332453826, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17538396, Length=389, Percent_Identity=28.0205655526992, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17533517, Length=379, Percent_Identity=28.2321899736148, Blast_Score=127, Evalue=9e-30,
Organism=Caenorhabditis elegans, GI17505929, Length=384, Percent_Identity=25.78125, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI71990804, Length=281, Percent_Identity=30.6049822064057, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17551932, Length=390, Percent_Identity=24.6153846153846, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71985184, Length=368, Percent_Identity=27.9891304347826, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71982178, Length=287, Percent_Identity=27.5261324041812, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI32563615, Length=236, Percent_Identity=27.9661016949153, Blast_Score=88, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17534353, Length=403, Percent_Identity=23.8213399503722, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI71985192, Length=282, Percent_Identity=28.0141843971631, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24660351, Length=397, Percent_Identity=29.2191435768262, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI21356377, Length=341, Percent_Identity=30.791788856305, Blast_Score=155, Evalue=5e-38,
Organism=Drosophila melanogaster, GI24646207, Length=391, Percent_Identity=30.690537084399, Blast_Score=149, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24666513, Length=383, Percent_Identity=27.9373368146214, Blast_Score=144, Evalue=9e-35,
Organism=Drosophila melanogaster, GI21355753, Length=392, Percent_Identity=27.0408163265306, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI281363737, Length=336, Percent_Identity=26.1904761904762, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI19920834, Length=278, Percent_Identity=27.6978417266187, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.21 [H]

Molecular weight: Translated: 43905; Mature: 43905

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSLSPELRALRDKVRQFIAEQVIPLENDERQSHHGPSEALRDELVARGKAAGLLTPHA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCH
SRAMGGMGLTHVEKAVVFEEAGYSWLGPTALNIHAPDEGNIHLMEEVATPAQKERWLRGQ
HHHHCCCCHHHHHHHHHHHHCCCCEECCEEEEEECCCCCCEEEHHHHCCCHHHHHHHHCC
VAGDWRSCFAMTEPAPGAGADPSMLDTTAVRDGDDYVINGRKWFITGAEGAHYAIVMARM
CCCCHHHHEEECCCCCCCCCCCCHHHHHEECCCCCEEECCEEEEEECCCCCEEEEEEEEE
EDGSATMFLTDMGRPGIVLERNMDAMDSCFTGGHGVLRFDNLRVPASDVLGEIGKGFRYA
CCCCEEEEEEECCCCCEEEECCCHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCEEE
QVRLAPARLTHCMRWLGQARRAHDTALEYARKRQAFGKPLAEHEGVGYMLADNDMDLHTA
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEECCCCCEEEE
RLHIWHTAWLLDQGEKCNFESSRAKVVCSEAEWRVVDRSVQILGGQGVTGETPVMRIFTD
EEEEEEEEEEECCCCCCCCCCCCCEEEECCCCEEEECCEEEEECCCCCCCCCHHHHHHHH
MRAFRIYDGPSEVHRWSMARKLVHMAENAAAAKEVA
HHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDFSLSPELRALRDKVRQFIAEQVIPLENDERQSHHGPSEALRDELVARGKAAGLLTPHA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCH
SRAMGGMGLTHVEKAVVFEEAGYSWLGPTALNIHAPDEGNIHLMEEVATPAQKERWLRGQ
HHHHCCCCHHHHHHHHHHHHCCCCEECCEEEEEECCCCCCEEEHHHHCCCHHHHHHHHCC
VAGDWRSCFAMTEPAPGAGADPSMLDTTAVRDGDDYVINGRKWFITGAEGAHYAIVMARM
CCCCHHHHEEECCCCCCCCCCCCHHHHHEECCCCCEEECCEEEEEECCCCCEEEEEEEEE
EDGSATMFLTDMGRPGIVLERNMDAMDSCFTGGHGVLRFDNLRVPASDVLGEIGKGFRYA
CCCCEEEEEEECCCCCEEEECCCHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCEEE
QVRLAPARLTHCMRWLGQARRAHDTALEYARKRQAFGKPLAEHEGVGYMLADNDMDLHTA
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEECCCCCEEEE
RLHIWHTAWLLDQGEKCNFESSRAKVVCSEAEWRVVDRSVQILGGQGVTGETPVMRIFTD
EEEEEEEEEEECCCCCCCCCCCCCEEEECCCCEEEECCEEEEECCCCCCCCCHHHHHHHH
MRAFRIYDGPSEVHRWSMARKLVHMAENAAAAKEVA
HHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629170; 12420174 [H]