The gene/protein map for NC_011992 is currently unavailable.
Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

Click here to switch to the map view.

The map label for this gene is yjiJ [H]

Identifier: 222109430

GI number: 222109430

Start: 230597

End: 231865

Strand: Direct

Name: yjiJ [H]

Synonym: Dtpsy_0209

Alternate gene names: 222109430

Gene position: 230597-231865 (Clockwise)

Preceding gene: 222109427

Following gene: 222109436

Centisome position: 6.07

GC content: 75.33

Gene sequence:

>1269_bases
ATGGAACCACAAGCCACCCCGTCGATTGATGTGCCCGCGCCCCGCGGGCCCGCCCTGCACTGGAGCGAGCGGCCCCATGC
CGTGGCCCTGGCCGGCATGCTGGCGCTGGCGGTGGCCATGGGCGTGGGGCGGTTCGCGTTCACCCCGCTGCTGCCCATGA
TGCTGCACGACGGGGTGCTGACCCTCACCGAGGGCAGCTGGCTGGCCACGGCCAACTACGTGGGCTACCTGCTGGGCGCG
CTGGCCTGCATGGCACTGCCCTGGGTGGCACCGGGCTTCTATGCGCGCTGGCATCCGGCGCGGCTGGCGCGTGCCGGGCT
GGTGGCCACGGTGCTGCTCACGCTGGCGATGGCGCTGCCCGTGGCCGCCGCGTGGCCGGCGCTGCGCTTTGCGGCCGGGG
CCGCCAGCGCCTTCGTGCTGCTGAACGTGGCGGCCTGGTGCATGGTGCGCTTGGCGGTGCTGGGCCGCCCGGCCATGGGC
GGGCTGATCTTCTGCGGGCCGGGCGTGGGCATCGTGCTCACGGGGCTGGCCGCCAGCGCGATGGTGGCAGCGCAGTGGCG
TGCGGCCTCGGGCTGGGTGGTCTTCGGGATGCTCTCGGTGCTGCTGTGCGTGGGCGTGTGGCCCGTGGTGCGTGGCCGCG
CGGTCAAGGCCGACCCCGGTGCCCAGCCCCGCGCGGCCGCGCAGGGGGGAAACGCCGGCACCCTGGCGGCGCGCGGCGTG
CACGCCGTGGCGTACGGCCTGGCGGGGCTGGGCTACATCGTGACCGCCACCTTCCTGCCCGTGATTGCGCGTGCCGCGCT
GCCCTCCGGTTCACCCTGGCCCGACCTTTTCTGGCCGATGTTCGGCGCGGGCGTGGCCGTAGGCGCGGCGCTCAGCACGC
GCGCGCCCAGCGCCTGGGACCGGCGCTGGCTGCTGCTGGCGGCGTATGCGCTGCAGGCGCTTGGCATCGTGCTGGGGCTG
GTCTGGCCCACGCCGGCGGGCTTTGCACTCAGCAGCGCGCTGGTGGGCCTGCCGTTCACGGCCATCACCTTCTACGGCCT
GCAGGAGGCGCGGCGCCTGTGGCCGCAGTCTGCCGACAGCTTTGCGAGCCTGGTCACGGCCGTCTACGGCCTGGGCCAGA
TCGCGGGTCCGCCGCTGGTGGCGTGGCTGCTCGCGCACGCCGATGCCGGCCAGGGCTTTGCCCGCGGGCTGGCGCTGGCG
GCGGGGGCACTGGTGGCCGGCGCGGCGATGTACGGCTGGTCGGCCTGGCGCTGGCCGCAGCGCGCCTGA

Upstream 100 bases:

>100_bases
CTCCAGTGCGACCAGGTCCATGGATTCGTTTGTGAGATGATTTATAAAAAAATCATCTTAAAAAAAGATTGATGGCGATC
ATACCGCCGGAGACCGCGCC

Downstream 100 bases:

>100_bases
CAGGCCGTCAGTGCTGCCCCTGCAGGCGCGCGTCCCAGGCCTCGCTCTGTCCGCTGTCCAGGCGCCGCTGGAACAGCCGC
TGCCATGACGGCGGCAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MEPQATPSIDVPAPRGPALHWSERPHAVALAGMLALAVAMGVGRFAFTPLLPMMLHDGVLTLTEGSWLATANYVGYLLGA
LACMALPWVAPGFYARWHPARLARAGLVATVLLTLAMALPVAAAWPALRFAAGAASAFVLLNVAAWCMVRLAVLGRPAMG
GLIFCGPGVGIVLTGLAASAMVAAQWRAASGWVVFGMLSVLLCVGVWPVVRGRAVKADPGAQPRAAAQGGNAGTLAARGV
HAVAYGLAGLGYIVTATFLPVIARAALPSGSPWPDLFWPMFGAGVAVGAALSTRAPSAWDRRWLLLAAYALQALGIVLGL
VWPTPAGFALSSALVGLPFTAITFYGLQEARRLWPQSADSFASLVTAVYGLGQIAGPPLVAWLLAHADAGQGFARGLALA
AGALVAGAAMYGWSAWRWPQRA

Sequences:

>Translated_422_residues
MEPQATPSIDVPAPRGPALHWSERPHAVALAGMLALAVAMGVGRFAFTPLLPMMLHDGVLTLTEGSWLATANYVGYLLGA
LACMALPWVAPGFYARWHPARLARAGLVATVLLTLAMALPVAAAWPALRFAAGAASAFVLLNVAAWCMVRLAVLGRPAMG
GLIFCGPGVGIVLTGLAASAMVAAQWRAASGWVVFGMLSVLLCVGVWPVVRGRAVKADPGAQPRAAAQGGNAGTLAARGV
HAVAYGLAGLGYIVTATFLPVIARAALPSGSPWPDLFWPMFGAGVAVGAALSTRAPSAWDRRWLLLAAYALQALGIVLGL
VWPTPAGFALSSALVGLPFTAITFYGLQEARRLWPQSADSFASLVTAVYGLGQIAGPPLVAWLLAHADAGQGFARGLALA
AGALVAGAAMYGWSAWRWPQRA
>Mature_422_residues
MEPQATPSIDVPAPRGPALHWSERPHAVALAGMLALAVAMGVGRFAFTPLLPMMLHDGVLTLTEGSWLATANYVGYLLGA
LACMALPWVAPGFYARWHPARLARAGLVATVLLTLAMALPVAAAWPALRFAAGAASAFVLLNVAAWCMVRLAVLGRPAMG
GLIFCGPGVGIVLTGLAASAMVAAQWRAASGWVVFGMLSVLLCVGVWPVVRGRAVKADPGAQPRAAAQGGNAGTLAARGV
HAVAYGLAGLGYIVTATFLPVIARAALPSGSPWPDLFWPMFGAGVAVGAALSTRAPSAWDRRWLLLAAYALQALGIVLGL
VWPTPAGFALSSALVGLPFTAITFYGLQEARRLWPQSADSFASLVTAVYGLGQIAGPPLVAWLLAHADAGQGFARGLALA
AGALVAGAAMYGWSAWRWPQRA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790788, Length=367, Percent_Identity=31.6076294277929, Blast_Score=112, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010645
- InterPro:   IPR016196 [H]

Pfam domain/function: PF06779 DUF1228 [H]

EC number: NA

Molecular weight: Translated: 43462; Mature: 43462

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPQATPSIDVPAPRGPALHWSERPHAVALAGMLALAVAMGVGRFAFTPLLPMMLHDGVL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEE
TLTEGSWLATANYVGYLLGALACMALPWVAPGFYARWHPARLARAGLVATVLLTLAMALP
EEECCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH
VAAAWPALRFAAGAASAFVLLNVAAWCMVRLAVLGRPAMGGLIFCGPGVGIVLTGLAASA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHH
MVAAQWRAASGWVVFGMLSVLLCVGVWPVVRGRAVKADPGAQPRAAAQGGNAGTLAARGV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHCCCCCCCHHHHHH
HAVAYGLAGLGYIVTATFLPVIARAALPSGSPWPDLFWPMFGAGVAVGAALSTRAPSAWD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
RRWLLLAAYALQALGIVLGLVWPTPAGFALSSALVGLPFTAITFYGLQEARRLWPQSADS
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHH
FASLVTAVYGLGQIAGPPLVAWLLAHADAGQGFARGLALAAGALVAGAAMYGWSAWRWPQ
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCC
RA
CC
>Mature Secondary Structure
MEPQATPSIDVPAPRGPALHWSERPHAVALAGMLALAVAMGVGRFAFTPLLPMMLHDGVL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEE
TLTEGSWLATANYVGYLLGALACMALPWVAPGFYARWHPARLARAGLVATVLLTLAMALP
EEECCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH
VAAAWPALRFAAGAASAFVLLNVAAWCMVRLAVLGRPAMGGLIFCGPGVGIVLTGLAASA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHH
MVAAQWRAASGWVVFGMLSVLLCVGVWPVVRGRAVKADPGAQPRAAAQGGNAGTLAARGV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHCCCCCCCHHHHHH
HAVAYGLAGLGYIVTATFLPVIARAALPSGSPWPDLFWPMFGAGVAVGAALSTRAPSAWD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
RRWLLLAAYALQALGIVLGLVWPTPAGFALSSALVGLPFTAITFYGLQEARRLWPQSADS
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHH
FASLVTAVYGLGQIAGPPLVAWLLAHADAGQGFARGLALAAGALVAGAAMYGWSAWRWPQ
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCC
RA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]