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The map label for this gene is 222109427

Identifier: 222109427

GI number: 222109427

Start: 226830

End: 228164

Strand: Direct

Name: 222109427

Synonym: Dtpsy_0206

Alternate gene names: NA

Gene position: 226830-228164 (Clockwise)

Preceding gene: 222109425

Following gene: 222109430

Centisome position: 5.97

GC content: 60.15

Gene sequence:

>1335_bases
ATGAGCCCGTATAAGAATTTCGAGAACTGGGGGGGGAGTCTCTCGGCATTTTTGTTTTTTTCCCTGAGCCTGATCGTACC
GTCGGGCTACTCCTATGGGGCTGCAGCGCTCGCGTTGCTGGCCCTCGCTGGCTGTTTGCAAAAGGGTTCGCATGGGGTGG
CCTCCCTGGATACGAAAATCTTACTCGCAAGTCTGTGCCTCACAGGCATGCTATGGACGGCACCCTTTGATCGAGCCTGG
TCCATTTCCGGGCTGGGCATTGGCGCCAAATATGCATTTGCCGCGCTCACACTCTGGGCCTTGAGCCAAAGAGTGCTGTC
TCCCCATGCCGTGGTTTGGGGTGTGGCCGCGGGCGCGGTGGGCGCTCTGGGCATTGCAGCGTACCAGTACCTGGTTTTGC
ATTGGGTCAAGGCCCAGGGATTCACCAACGCCATCGAGTACGGCGGCATCGCCATGTATATGGGTATTGCGGCGTGGGCC
ATGGCCATGCTGGGGCGCTGGCGCTGGCACCAGATCGCGGCCCTGGGCATATGTGGTGCCTGCGGCGTCCTGGCCTCGCT
GTTGTCGGAGTCGCGGGGCTCGTGGGTGACGGTTCCGCTGCTGCTGGCTGCCATTTGGCTCATGGCTTGGCGCAATGGCT
ACCGGCGCATCGCCTCTGCCGCCATTGCGGCGATGCTGATCGGCGGCGCGGCATTGGTGCTGCCCGCATACAAGAAGTTC
GAGCAGCGCGCGGATCTTGCCGTCCAGGAAGCACGGCATTATCTGGCGGAGCCCCAGAAGTACGCAGAAACCTCCATCGG
CCAGCGTCTGGAACAATGGCGGCTAGCCGTCGATCTGATCGAGGAACGTCCTGTGGCAGGCTGGGGGCTTGACGGCTACC
CTAAAGCCAAGCAGGCCATGGTCGACAAGGGCGCTGCCCACCCTTCCGTCATGCAGTACGGCCATGCCCACAACGAAATT
CTGGACATGTGGGTCAAGCGCGGCCTGATTGGACTCCTGATCCTGCTCTTCTTCTATGCAGCGCCGCTGTATGTGTTTTG
GCCTACGCCACGGCGTCTGGCACGGGTTGATACCACGCTGCAGCCTCGGCTGTTGGCTCTCAGGGCCGCTGCTGCATTGC
TGCCGCTGGCCTATTTCGGTTTTGGGTGGACCCAGGTTTTCTTCGCACACAACAGTGGCCAAATGTTTTACATCTTCTCG
CTGGCGATCTTCTGGGGTGCCATTTGCTATCTGGAAAAAACGGAGGCCAACACCTGGGTCGTTTCAGGCCACGGAGAAGT
TCAACACAAAGCTCGGCCTGTTTATCCAAACGGACTTCGCTGCCCGCTCAACTAA

Upstream 100 bases:

>100_bases
GCATGCGTTGCTGGCGCTCGGTATCCTTGGCAAGGTTGATGTAAACAATGGGAATGTTGGACATTCGTAGATCCAGCGGA
CATTTGGATAGGAAAATGGT

Downstream 100 bases:

>100_bases
CACGGCACCGGGCACATGTCGCCCAAACCTTCGCTGACGTCGGGCGGATGTGGAAGTTCTCAAAGCTGCTGTGCTCCCGT
CTCCCGGTGGCGCAAATCTG

Product: o-antigen polymerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MSPYKNFENWGGSLSAFLFFSLSLIVPSGYSYGAAALALLALAGCLQKGSHGVASLDTKILLASLCLTGMLWTAPFDRAW
SISGLGIGAKYAFAALTLWALSQRVLSPHAVVWGVAAGAVGALGIAAYQYLVLHWVKAQGFTNAIEYGGIAMYMGIAAWA
MAMLGRWRWHQIAALGICGACGVLASLLSESRGSWVTVPLLLAAIWLMAWRNGYRRIASAAIAAMLIGGAALVLPAYKKF
EQRADLAVQEARHYLAEPQKYAETSIGQRLEQWRLAVDLIEERPVAGWGLDGYPKAKQAMVDKGAAHPSVMQYGHAHNEI
LDMWVKRGLIGLLILLFFYAAPLYVFWPTPRRLARVDTTLQPRLLALRAAAALLPLAYFGFGWTQVFFAHNSGQMFYIFS
LAIFWGAICYLEKTEANTWVVSGHGEVQHKARPVYPNGLRCPLN

Sequences:

>Translated_444_residues
MSPYKNFENWGGSLSAFLFFSLSLIVPSGYSYGAAALALLALAGCLQKGSHGVASLDTKILLASLCLTGMLWTAPFDRAW
SISGLGIGAKYAFAALTLWALSQRVLSPHAVVWGVAAGAVGALGIAAYQYLVLHWVKAQGFTNAIEYGGIAMYMGIAAWA
MAMLGRWRWHQIAALGICGACGVLASLLSESRGSWVTVPLLLAAIWLMAWRNGYRRIASAAIAAMLIGGAALVLPAYKKF
EQRADLAVQEARHYLAEPQKYAETSIGQRLEQWRLAVDLIEERPVAGWGLDGYPKAKQAMVDKGAAHPSVMQYGHAHNEI
LDMWVKRGLIGLLILLFFYAAPLYVFWPTPRRLARVDTTLQPRLLALRAAAALLPLAYFGFGWTQVFFAHNSGQMFYIFS
LAIFWGAICYLEKTEANTWVVSGHGEVQHKARPVYPNGLRCPLN
>Mature_443_residues
SPYKNFENWGGSLSAFLFFSLSLIVPSGYSYGAAALALLALAGCLQKGSHGVASLDTKILLASLCLTGMLWTAPFDRAWS
ISGLGIGAKYAFAALTLWALSQRVLSPHAVVWGVAAGAVGALGIAAYQYLVLHWVKAQGFTNAIEYGGIAMYMGIAAWAM
AMLGRWRWHQIAALGICGACGVLASLLSESRGSWVTVPLLLAAIWLMAWRNGYRRIASAAIAAMLIGGAALVLPAYKKFE
QRADLAVQEARHYLAEPQKYAETSIGQRLEQWRLAVDLIEERPVAGWGLDGYPKAKQAMVDKGAAHPSVMQYGHAHNEIL
DMWVKRGLIGLLILLFFYAAPLYVFWPTPRRLARVDTTLQPRLLALRAAAALLPLAYFGFGWTQVFFAHNSGQMFYIFSL
AIFWGAICYLEKTEANTWVVSGHGEVQHKARPVYPNGLRCPLN

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007016 [H]

Pfam domain/function: PF04932 Wzy_C [H]

EC number: NA

Molecular weight: Translated: 48502; Mature: 48371

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EECCCCHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SPYKNFENWGGSLSAFLFFSLSLIVPSGYSYGAAALALLALAGCLQKGSHGVASLDTKI
CCCCCHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH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EECCCCHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]