| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109436
Identifier: 222109436
GI number: 222109436
Start: 236733
End: 237434
Strand: Direct
Name: 222109436
Synonym: Dtpsy_0215
Alternate gene names: NA
Gene position: 236733-237434 (Clockwise)
Preceding gene: 222109430
Following gene: 222109437
Centisome position: 6.24
GC content: 76.21
Gene sequence:
>702_bases ATGGCCCGTTCCGCATCCGCGTTGCTGCACCCCGTCGCTTCGGTGCGCCACTATGGTGGCGAGCACCAGGCCCATGCCCA CGCACATGCGCAGGTGCTGTACGCGCTGCAGGGGCGCATGGAGCTGGAGGTGGCCGGCCGCGCCGCCTTCGTGGACACGG CCTGCGGCATGGTGGTGCCCGCGGGCACCGAGCATGGCTACCTGGCCCGCCCGGACACGCGCATCTTGGTGATCGACGTG CCGGCGCAGGCCGCCGTGGACCGCGTGCGCCGCTTCGCCGTGCCCGCGGCGGCGCGCACCGTGCCCGAGCCCGGTGGCGC GGCCGCGCGCCTGGCGCTGCTGCTGCAGGCCCCGCGCGTGCTGGCGCGCCGCGGGCTGGACCTGGCCGCCCTGTGTGCCG CCGTGGACGCGGCCCTGCACGAGGACTGGCCCACCGCCCGCATGGCGCGGCTGTTCCACCTGAGCGCGGCGCGCTTTCAC GCGCGGCTGCTGGAGCTGACGGGCGACACGCCCCAGCAGTGGCTGCGCGCGCGGCGGCTGGACCTGGCCGAGCGCGCCCT GGCCCGCGGCCAGTCGCTGGAGGCCACGGCCCTGCGCTGCGGCTATGCCAGCGCCAGCGCCCTGGCCTATGCGCTGCGGC GCGAGCGGGGCCTGGGAGCGCGGGCGCTGAGAATACAAGCCAAAACAGCCTCCAGCGCTTGA
Upstream 100 bases:
>100_bases GCGGCGGGCGGCGGCGGATGCGGGGGCGTCAGGCGGCATGGATGCGGAAAAGAGGCGCGGTCGTGAAAAAGCCAGAGCGG CATTGCCCTAGTATTTGAGC
Downstream 100 bases:
>100_bases TGGATCAGCGCAAACAGCTATCAATAATGAAGTAGAGCGCGCGGCACCACGCGCGTTGCTCGATAGTTGCCCTGCGGCGT GCGGGCACCATCGCGGGCAT
Product: AraC family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator Arac Family; Transcriptional Regulator AraC Family
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MARSASALLHPVASVRHYGGEHQAHAHAHAQVLYALQGRMELEVAGRAAFVDTACGMVVPAGTEHGYLARPDTRILVIDV PAQAAVDRVRRFAVPAAARTVPEPGGAAARLALLLQAPRVLARRGLDLAALCAAVDAALHEDWPTARMARLFHLSAARFH ARLLELTGDTPQQWLRARRLDLAERALARGQSLEATALRCGYASASALAYALRRERGLGARALRIQAKTASSA
Sequences:
>Translated_233_residues MARSASALLHPVASVRHYGGEHQAHAHAHAQVLYALQGRMELEVAGRAAFVDTACGMVVPAGTEHGYLARPDTRILVIDV PAQAAVDRVRRFAVPAAARTVPEPGGAAARLALLLQAPRVLARRGLDLAALCAAVDAALHEDWPTARMARLFHLSAARFH ARLLELTGDTPQQWLRARRLDLAERALARGQSLEATALRCGYASASALAYALRRERGLGARALRIQAKTASSA >Mature_232_residues ARSASALLHPVASVRHYGGEHQAHAHAHAQVLYALQGRMELEVAGRAAFVDTACGMVVPAGTEHGYLARPDTRILVIDVP AQAAVDRVRRFAVPAAARTVPEPGGAAARLALLLQAPRVLARRGLDLAALCAAVDAALHEDWPTARMARLFHLSAARFHA RLLELTGDTPQQWLRARRLDLAERALARGQSLEATALRCGYASASALAYALRRERGLGARALRIQAKTASSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24903; Mature: 24772
Theoretical pI: Translated: 11.26; Mature: 11.26
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSASALLHPVASVRHYGGEHQAHAHAHAQVLYALQGRMELEVAGRAAFVDTACGMVVP CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCEEEE AGTEHGYLARPDTRILVIDVPAQAAVDRVRRFAVPAAARTVPEPGGAAARLALLLQAPRV CCCCCCEEECCCCEEEEEECCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHH LARRGLDLAALCAAVDAALHEDWPTARMARLFHLSAARFHARLLELTGDTPQQWLRARRL HHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH DLAERALARGQSLEATALRCGYASASALAYALRRERGLGARALRIQAKTASSA HHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC >Mature Secondary Structure ARSASALLHPVASVRHYGGEHQAHAHAHAQVLYALQGRMELEVAGRAAFVDTACGMVVP CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCEEEE AGTEHGYLARPDTRILVIDVPAQAAVDRVRRFAVPAAARTVPEPGGAAARLALLLQAPRV CCCCCCEEECCCCEEEEEECCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHH LARRGLDLAALCAAVDAALHEDWPTARMARLFHLSAARFHARLLELTGDTPQQWLRARRL HHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH DLAERALARGQSLEATALRCGYASASALAYALRRERGLGARALRIQAKTASSA HHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA