| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109242
Identifier: 222109242
GI number: 222109242
Start: 16551
End: 17057
Strand: Direct
Name: 222109242
Synonym: Dtpsy_0017
Alternate gene names: NA
Gene position: 16551-17057 (Clockwise)
Preceding gene: 222109241
Following gene: 222109244
Centisome position: 0.44
GC content: 66.47
Gene sequence:
>507_bases ATGTCCATGCCCGACGATTCCCCCCACGCCACGCTGTGGAACCGCATCAAGGACATCCGCTTTGCCATGCTCGCCCACCG CGCAGCCGACGGCCGGCTGCATGCCCACCCGCTGACCACGCTGAACAAGGACATCGATGCGCAGTCCCAGCTGTTCTTCT TCATCCCGCGCGGCAGCGAGTTGCACAGCCGCCTGCAGGCCGACAGCCAGGTGCATTTGAGCTACGCCGACCCGGGCGAA GACTGCTACGTGTCGCTGTCGGGCACGGCCGGTTTCATCGAGGACCCCGCGCGCAAGGAAGCACTGTGGACGCCGCTGGC CAAGGCCTGGTTCCCCGACGGTCCCACAGACCCCAATCTGGTGCTGCTGGCCGTCCGCATCGAGCATGCGGAATACTGGG ACGTGAAGGACAGCAAGCTCTCCCAGCTCTACCAACTGGCCACCGCCGCGTTGACCGGCGAGCAGCCCAAGCCGCTGGGC GAGCACCGCGAGCTGTCGCTGGACTGA
Upstream 100 bases:
>100_bases CGCACCCCGAGCGCACCCTACAGTGCGTTGCATGCCCGTCCCGGCGCGTGCGTGACGCACCGCGCCGTGGCGTCCACCTA CATCCCACGGAGGTTCTCCC
Downstream 100 bases:
>100_bases CGGCGCGCCCAACCCGCGCGGGGGCACTTTGCGCGAGGAGCGTCTGTCTTGCCAGCGCGCGTTGCTGGAGCGGAGAGCGG GCGCCGCAAGCCGCGGCGTG
Product: pyridoxamine 5'-phosphate oxidase-like protein
Products: NA
Alternate protein names: Stress Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5-Phosphate Oxidase-Related Protein; General Stress
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSMPDDSPHATLWNRIKDIRFAMLAHRAADGRLHAHPLTTLNKDIDAQSQLFFFIPRGSELHSRLQADSQVHLSYADPGE DCYVSLSGTAGFIEDPARKEALWTPLAKAWFPDGPTDPNLVLLAVRIEHAEYWDVKDSKLSQLYQLATAALTGEQPKPLG EHRELSLD
Sequences:
>Translated_168_residues MSMPDDSPHATLWNRIKDIRFAMLAHRAADGRLHAHPLTTLNKDIDAQSQLFFFIPRGSELHSRLQADSQVHLSYADPGE DCYVSLSGTAGFIEDPARKEALWTPLAKAWFPDGPTDPNLVLLAVRIEHAEYWDVKDSKLSQLYQLATAALTGEQPKPLG EHRELSLD >Mature_167_residues SMPDDSPHATLWNRIKDIRFAMLAHRAADGRLHAHPLTTLNKDIDAQSQLFFFIPRGSELHSRLQADSQVHLSYADPGED CYVSLSGTAGFIEDPARKEALWTPLAKAWFPDGPTDPNLVLLAVRIEHAEYWDVKDSKLSQLYQLATAALTGEQPKPLGE HRELSLD
Specific function: Unknown
COG id: COG3871
COG function: function code R; Uncharacterized stress protein (general stress protein 26)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18813; Mature: 18682
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMPDDSPHATLWNRIKDIRFAMLAHRAADGRLHAHPLTTLNKDIDAQSQLFFFIPRGSE CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEEEEECCHH LHSRLQADSQVHLSYADPGEDCYVSLSGTAGFIEDPARKEALWTPLAKAWFPDGPTDPNL HHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCE VLLAVRIEHAEYWDVKDSKLSQLYQLATAALTGEQPKPLGEHRELSLD EEEEEEECCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SMPDDSPHATLWNRIKDIRFAMLAHRAADGRLHAHPLTTLNKDIDAQSQLFFFIPRGSE CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEEEEECCHH LHSRLQADSQVHLSYADPGEDCYVSLSGTAGFIEDPARKEALWTPLAKAWFPDGPTDPNL HHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCE VLLAVRIEHAEYWDVKDSKLSQLYQLATAALTGEQPKPLGEHRELSLD EEEEEEECCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA