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The map label for this gene is occM [H]

Identifier: 222102718

GI number: 222102718

Start: 369188

End: 369874

Strand: Direct

Name: occM [H]

Synonym: Avi_7395

Alternate gene names: 222102718

Gene position: 369188-369874 (Clockwise)

Preceding gene: 222102717

Following gene: 222102719

Centisome position: 58.44

GC content: 54.59

Gene sequence:

>687_bases
ATGTCTGATTTCGGATCTTATCTCTCCGGTGAACTTATCACAGGCTTGCAGACGACAATTGTGCTGTTCCTGGCTTCTGC
TATCACCGGCAACCTGTTGGCGCTTCCGGTGGCGCTGGGCAGGATATCCACGCGGAAGTGGATCAGATATCCTGTTATCG
GTTTCATGCTCTCGTTTCGCGGCACACCGCTTCTGGTCCAGCTTTACATCTTCTACTTTGGCGTCGGCCAGGTTCTGGCA
ACAGTTCCGGCAATCCGCTACAGCCCTCTTTGGCCGCTGTTGCGCAGTGCAAATGGCTATGCTTACGTCGTGCTTTCGTT
GAATACTGCCGCCTATTGTGCGGAAATTTGGAGAGGTGCCATTCTCGGCCTCCCGATCGGGCAAAGCGAGGCGGGTCGCT
CGCTTGGATTGTCCAAACAACGAATCACTGTATCAATCCTGCTTCCTCAGGCATTCCGGCTGGCGCTTCCGGCGATTGGC
GGCCAGAACATCCTACTTTTGAAGGGAACAGCGCTGACCGCCGCCATTACGGTTTTTGAGACAATGGCAACGGCCAACCT
TGTTCGCGCCCAGACCTTTCGAACCTACGAGCCGCTGCTCGCAGCAGCTCTTGTCTACTTTGTCCTGGCCTCGATCATCA
CCTCTGGCTTCAAATATATGGAAACCCGGTTGGCTTCCCGATACTAA

Upstream 100 bases:

>100_bases
GCGGCGGTCGGCGTGGTGTTTCTCATTATGTCCGGCGCGTCCACGCTTGTGTTCCATTATCTCGAAGTGAAGACTTCTCT
CACCTGGAGGCGTAAATAAG

Downstream 100 bases:

>100_bases
TCGAGGCCTCTTTGCTGTTTCTCGTCAATGGAGGCTAGGGTGATCCCAGGGGATGTGGATTTTACACCGCGTGAGGTCGA
GGTCTTTGCGGCGGTCATGT

Product: ABC transporter membrane spanning protein

Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSDFGSYLSGELITGLQTTIVLFLASAITGNLLALPVALGRISTRKWIRYPVIGFMLSFRGTPLLVQLYIFYFGVGQVLA
TVPAIRYSPLWPLLRSANGYAYVVLSLNTAAYCAEIWRGAILGLPIGQSEAGRSLGLSKQRITVSILLPQAFRLALPAIG
GQNILLLKGTALTAAITVFETMATANLVRAQTFRTYEPLLAAALVYFVLASIITSGFKYMETRLASRY

Sequences:

>Translated_228_residues
MSDFGSYLSGELITGLQTTIVLFLASAITGNLLALPVALGRISTRKWIRYPVIGFMLSFRGTPLLVQLYIFYFGVGQVLA
TVPAIRYSPLWPLLRSANGYAYVVLSLNTAAYCAEIWRGAILGLPIGQSEAGRSLGLSKQRITVSILLPQAFRLALPAIG
GQNILLLKGTALTAAITVFETMATANLVRAQTFRTYEPLLAAALVYFVLASIITSGFKYMETRLASRY
>Mature_227_residues
SDFGSYLSGELITGLQTTIVLFLASAITGNLLALPVALGRISTRKWIRYPVIGFMLSFRGTPLLVQLYIFYFGVGQVLAT
VPAIRYSPLWPLLRSANGYAYVVLSLNTAAYCAEIWRGAILGLPIGQSEAGRSLGLSKQRITVSILLPQAFRLALPAIGG
QNILLLKGTALTAAITVFETMATANLVRAQTFRTYEPLLAAALVYFVLASIITSGFKYMETRLASRY

Specific function: Component of the octopine active transport system probably consisting of four subunits:Q, M, P and T [H]

COG id: COG4160

COG function: function code E; ABC-type arginine/histidine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788645, Length=217, Percent_Identity=36.8663594470046, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI1787086, Length=216, Percent_Identity=35.1851851851852, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1788226, Length=213, Percent_Identity=34.2723004694836, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI1787030, Length=170, Percent_Identity=32.3529411764706, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787087, Length=185, Percent_Identity=31.8918918918919, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786873, Length=210, Percent_Identity=29.5238095238095, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788646, Length=219, Percent_Identity=23.7442922374429, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI87082239, Length=213, Percent_Identity=29.5774647887324, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24766; Mature: 24634

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFGSYLSGELITGLQTTIVLFLASAITGNLLALPVALGRISTRKWIRYPVIGFMLSFR
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTPLLVQLYIFYFGVGQVLATVPAIRYSPLWPLLRSANGYAYVVLSLNTAAYCAEIWRGA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEECCHHHHHHHHHCCC
ILGLPIGQSEAGRSLGLSKQRITVSILLPQAFRLALPAIGGQNILLLKGTALTAAITVFE
EEECCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHH
TMATANLVRAQTFRTYEPLLAAALVYFVLASIITSGFKYMETRLASRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDFGSYLSGELITGLQTTIVLFLASAITGNLLALPVALGRISTRKWIRYPVIGFMLSFR
CCHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTPLLVQLYIFYFGVGQVLATVPAIRYSPLWPLLRSANGYAYVVLSLNTAAYCAEIWRGA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEECCHHHHHHHHHCCC
ILGLPIGQSEAGRSLGLSKQRITVSILLPQAFRLALPAIGGQNILLLKGTALTAAITVFE
EEECCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHH
TMATANLVRAQTFRTYEPLLAAALVYFVLASIITSGFKYMETRLASRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]

Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655707; 1732218 [H]