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The map label for this gene is occQ [H]

Identifier: 222102717

GI number: 222102717

Start: 368464

End: 369186

Strand: Direct

Name: occQ [H]

Synonym: Avi_7394

Alternate gene names: 222102717

Gene position: 368464-369186 (Clockwise)

Preceding gene: 222102716

Following gene: 222102718

Centisome position: 58.32

GC content: 56.29

Gene sequence:

>723_bases
ATGGATGCAAATATGGCCTGGTTCACTTTACTCAGCTTTGGCGACCAAGGCTGGAGCGACGAGCTGCTGCAAGGCGCGTG
GCTCAGCATCAAGATTTCCCTCAGTGCCTACCTCATCGGGTTGGTGCTTGGGCTAGTCGGCGCCATTGCCAAACTGTCGA
AGAGCGTCGTGGCCAGATCTTTTGCCGGCACCTACACGACAGTCATCCGGTCTGTCCCGGATATTCTCGTTATCTTTTTG
ATCTATTACTCGGCGACCGACGCCCTGAGCTATTTATTGAGCATGTCGGGCCTGTCGGTTGAGTTCCAGCTGAATGGCTT
TATTGCTGCCGCGATCTCGCTTGGCGTCGTCCAAGGTGGCTACAGCACGGAAGTATTGCGCGGCGCAATCGTCGCCGTGG
CTCGCGGTCAGACCGAAGCAGCCTTTGCAGTGGGACTAACGCGCAAACAAGCGTTCTTCCTGGTGATCATCCCACAGATG
TTGCCGCTGGCGCTGCCGGGGCTGGGTAATCTATGGCTCATCGTCCTCAAGGAAAGCTCATTGGTAAGCCTCATCGGGTT
CACAGAACTGGTGCTGGTCGGCAAGATGGCCGCCGGTGCCACGCGGCACTACCTGCTTTTCTATGCGGCGGTCGGCGTGG
TGTTTCTCATTATGTCCGGCGCGTCCACGCTTGTGTTCCATTATCTCGAAGTGAAGACTTCTCTCACCTGGAGGCGTAAA
TAA

Upstream 100 bases:

>100_bases
TATTTCAACTTCGACATCTATGGCGAATGATGATCGAGTGAAGGGTTGGAGCCGGTCCTTCATGGCCGGCTTTTCTTCAA
ACTCGACGAATTGATGCGGC

Downstream 100 bases:

>100_bases
GATGTCTGATTTCGGATCTTATCTCTCCGGTGAACTTATCACAGGCTTGCAGACGACAATTGTGCTGTTCCTGGCTTCTG
CTATCACCGGCAACCTGTTG

Product: ABC transporter membrane spanning protein

Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MDANMAWFTLLSFGDQGWSDELLQGAWLSIKISLSAYLIGLVLGLVGAIAKLSKSVVARSFAGTYTTVIRSVPDILVIFL
IYYSATDALSYLLSMSGLSVEFQLNGFIAAAISLGVVQGGYSTEVLRGAIVAVARGQTEAAFAVGLTRKQAFFLVIIPQM
LPLALPGLGNLWLIVLKESSLVSLIGFTELVLVGKMAAGATRHYLLFYAAVGVVFLIMSGASTLVFHYLEVKTSLTWRRK

Sequences:

>Translated_240_residues
MDANMAWFTLLSFGDQGWSDELLQGAWLSIKISLSAYLIGLVLGLVGAIAKLSKSVVARSFAGTYTTVIRSVPDILVIFL
IYYSATDALSYLLSMSGLSVEFQLNGFIAAAISLGVVQGGYSTEVLRGAIVAVARGQTEAAFAVGLTRKQAFFLVIIPQM
LPLALPGLGNLWLIVLKESSLVSLIGFTELVLVGKMAAGATRHYLLFYAAVGVVFLIMSGASTLVFHYLEVKTSLTWRRK
>Mature_240_residues
MDANMAWFTLLSFGDQGWSDELLQGAWLSIKISLSAYLIGLVLGLVGAIAKLSKSVVARSFAGTYTTVIRSVPDILVIFL
IYYSATDALSYLLSMSGLSVEFQLNGFIAAAISLGVVQGGYSTEVLRGAIVAVARGQTEAAFAVGLTRKQAFFLVIIPQM
LPLALPGLGNLWLIVLKESSLVSLIGFTELVLVGKMAAGATRHYLLFYAAVGVVFLIMSGASTLVFHYLEVKTSLTWRRK

Specific function: Component of the octopine active transport system probably consisting of four subunits:Q, M, P and T [H]

COG id: COG4215

COG function: function code E; ABC-type arginine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788646, Length=223, Percent_Identity=35.8744394618834, Blast_Score=147, Evalue=9e-37,
Organism=Escherichia coli, GI1787087, Length=232, Percent_Identity=28.8793103448276, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1787030, Length=214, Percent_Identity=29.4392523364486, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1788226, Length=208, Percent_Identity=31.25, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1786873, Length=215, Percent_Identity=27.4418604651163, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1787086, Length=229, Percent_Identity=26.6375545851528, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1786874, Length=228, Percent_Identity=24.1228070175439, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI87082239, Length=150, Percent_Identity=31.3333333333333, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788645, Length=182, Percent_Identity=26.9230769230769, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25782; Mature: 25782

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDANMAWFTLLSFGDQGWSDELLQGAWLSIKISLSAYLIGLVLGLVGAIAKLSKSVVARS
CCCCHHHHHHHHCCCCCCCHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAGTYTTVIRSVPDILVIFLIYYSATDALSYLLSMSGLSVEFQLNGFIAAAISLGVVQGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCC
YSTEVLRGAIVAVARGQTEAAFAVGLTRKQAFFLVIIPQMLPLALPGLGNLWLIVLKESS
CHHHHHHHHHHEEECCCCCHHHEEECCCCCEEEEEEHHHHHHHHCCCCCCEEEEEEECCC
LVSLIGFTELVLVGKMAAGATRHYLLFYAAVGVVFLIMSGASTLVFHYLEVKTSLTWRRK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDANMAWFTLLSFGDQGWSDELLQGAWLSIKISLSAYLIGLVLGLVGAIAKLSKSVVARS
CCCCHHHHHHHHCCCCCCCHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAGTYTTVIRSVPDILVIFLIYYSATDALSYLLSMSGLSVEFQLNGFIAAAISLGVVQGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCC
YSTEVLRGAIVAVARGQTEAAFAVGLTRKQAFFLVIIPQMLPLALPGLGNLWLIVLKESS
CHHHHHHHHHHEEECCCCCHHHEEECCCCCEEEEEEHHHHHHHHCCCCCCEEEEEEECCC
LVSLIGFTELVLVGKMAAGATRHYLLFYAAVGVVFLIMSGASTLVFHYLEVKTSLTWRRK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]

Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA