Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102639

Identifier: 222102639

GI number: 222102639

Start: 252303

End: 253181

Strand: Reverse

Name: 222102639

Synonym: Avi_7294

Alternate gene names: NA

Gene position: 253181-252303 (Counterclockwise)

Preceding gene: 222102640

Following gene: 222102638

Centisome position: 40.07

GC content: 59.61

Gene sequence:

>879_bases
ATGATGGCGGCGATGGACATACCAACATCGGAGGAGGCAATGGTCCGCCGCGCACTGGATGCGCAGGCCGCCTATATGCC
GGATGTCCGTGCGGATATCGGTCAAGTAGGCGCAGGATGGACGACAGCCGAGGCATTCTTTTCCGACGAGGTGGCGCTGG
GCGAATTTCTCGCCTTCGAGCAATCGCTGAACGAAGGCACAGACATCAAGACGGCTGGGGCGCTGTTGATGACCGACTAT
GGCTACATTCTGGCCGCCGCTACTGTGCCGATCTTCGCTGGTTTTGGCCTCATCCCAAACCTTTCTCCGGCCAGCGTCGC
GCTTTCATTCTACACGACGCAAGAGCCGCATGACGGTGAGATGCACCGGGTGCGACGCGCCCATGTCCGTTTTCTCGAAG
AGACATTCTGGCAGGGTCAATTGGGTGACGCTGTTGCCGAAGAACGGCTGCGGGCCGAAATCGAGCGGCATTTCCGCCCC
GTCATCGACGCGATCCATGCACGCACGCGCCTCTCCCGCACAGCGCTCTGGCGGCTCGCCGGTGATGCAATTGCCGGTCG
CTTTCTCGATTCCGGCCGCCGGTTCGGCAGCGTCGAGGCGGCCAAGGCGTCGGCAATGCAGATCCTCAAAGTGCCCGGTT
CGCCGCTAGCCAACCGTCAGCTCCACTATTTCGATTTGAGCGTGCTCGACAACAACCAGCAGGAATTTTCATACACCTTC
CGTCAACGCGGCGGCTGCTGTCGATTTTATCTCGTCAAGGGCGGAGAATACTGTCCGACCTGTGTCTTGAAGGCACCGAC
AGATCGGGACGAAGAATTGCGCCTGGCCATGCGTCAACATCTCGGCGTCGCTGATGAGATTAGGTCAGGTTCAAACTGA

Upstream 100 bases:

>100_bases
GGGAACCGGTTTTCGGAAAGTCCGATGCGAAAACAAGAATCTAGAGCATCGTGCCGATTCCAATTTTTGGTACGATGCTC
TAAGGCGCGAGGGTTAAGCG

Downstream 100 bases:

>100_bases
ATCAGACAGTCTCTCGATTTTTTTGTTGTCGTTTGTCTTCTCGGCAAAACCGGTGACTACTTTTCCCTGACAAACTTTAA
AAAGCTCGAGATTTTTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MMAAMDIPTSEEAMVRRALDAQAAYMPDVRADIGQVGAGWTTAEAFFSDEVALGEFLAFEQSLNEGTDIKTAGALLMTDY
GYILAAATVPIFAGFGLIPNLSPASVALSFYTTQEPHDGEMHRVRRAHVRFLEETFWQGQLGDAVAEERLRAEIERHFRP
VIDAIHARTRLSRTALWRLAGDAIAGRFLDSGRRFGSVEAAKASAMQILKVPGSPLANRQLHYFDLSVLDNNQQEFSYTF
RQRGGCCRFYLVKGGEYCPTCVLKAPTDRDEELRLAMRQHLGVADEIRSGSN

Sequences:

>Translated_292_residues
MMAAMDIPTSEEAMVRRALDAQAAYMPDVRADIGQVGAGWTTAEAFFSDEVALGEFLAFEQSLNEGTDIKTAGALLMTDY
GYILAAATVPIFAGFGLIPNLSPASVALSFYTTQEPHDGEMHRVRRAHVRFLEETFWQGQLGDAVAEERLRAEIERHFRP
VIDAIHARTRLSRTALWRLAGDAIAGRFLDSGRRFGSVEAAKASAMQILKVPGSPLANRQLHYFDLSVLDNNQQEFSYTF
RQRGGCCRFYLVKGGEYCPTCVLKAPTDRDEELRLAMRQHLGVADEIRSGSN
>Mature_292_residues
MMAAMDIPTSEEAMVRRALDAQAAYMPDVRADIGQVGAGWTTAEAFFSDEVALGEFLAFEQSLNEGTDIKTAGALLMTDY
GYILAAATVPIFAGFGLIPNLSPASVALSFYTTQEPHDGEMHRVRRAHVRFLEETFWQGQLGDAVAEERLRAEIERHFRP
VIDAIHARTRLSRTALWRLAGDAIAGRFLDSGRRFGSVEAAKASAMQILKVPGSPLANRQLHYFDLSVLDNNQQEFSYTF
RQRGGCCRFYLVKGGEYCPTCVLKAPTDRDEELRLAMRQHLGVADEIRSGSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32357; Mature: 32357

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAAMDIPTSEEAMVRRALDAQAAYMPDVRADIGQVGAGWTTAEAFFSDEVALGEFLAFE
CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHH
QSLNEGTDIKTAGALLMTDYGYILAAATVPIFAGFGLIPNLSPASVALSFYTTQEPHDGE
HHHCCCCCCHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCCCCCH
MHRVRRAHVRFLEETFWQGQLGDAVAEERLRAEIERHFRPVIDAIHARTRLSRTALWRLA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GDAIAGRFLDSGRRFGSVEAAKASAMQILKVPGSPLANRQLHYFDLSVLDNNQQEFSYTF
HHHHHHHHHHCCCCCCCCHHHHHHHHHHEECCCCCCCCCEEEEEEEEEECCCHHHHHHHH
RQRGGCCRFYLVKGGEYCPTCVLKAPTDRDEELRLAMRQHLGVADEIRSGSN
HHCCCEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHCCCCC
>Mature Secondary Structure
MMAAMDIPTSEEAMVRRALDAQAAYMPDVRADIGQVGAGWTTAEAFFSDEVALGEFLAFE
CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHH
QSLNEGTDIKTAGALLMTDYGYILAAATVPIFAGFGLIPNLSPASVALSFYTTQEPHDGE
HHHCCCCCCHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCCCCCH
MHRVRRAHVRFLEETFWQGQLGDAVAEERLRAEIERHFRPVIDAIHARTRLSRTALWRLA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GDAIAGRFLDSGRRFGSVEAAKASAMQILKVPGSPLANRQLHYFDLSVLDNNQQEFSYTF
HHHHHHHHHHCCCCCCCCHHHHHHHHHHEECCCCCCCCCEEEEEEEEEECCCHHHHHHHH
RQRGGCCRFYLVKGGEYCPTCVLKAPTDRDEELRLAMRQHLGVADEIRSGSN
HHCCCEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA