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The map label for this gene is viuA [H]

Identifier: 222102638

GI number: 222102638

Start: 249699

End: 252206

Strand: Reverse

Name: viuA [H]

Synonym: Avi_7293

Alternate gene names: 222102638

Gene position: 252206-249699 (Counterclockwise)

Preceding gene: 222102639

Following gene: 222102637

Centisome position: 39.92

GC content: 57.02

Gene sequence:

>2508_bases
TTGGGGTCAGAGTCCCAAACCGGGAAAATCAATCGTCTACCCCCCGAGCACAACGTGGCGTTGCTCCTTACGGTGGGCTG
CAAAGCCTTGAGTACCGGAGAGTTTGGGGGTTCTATGACGAAGACTTTTTCCACTACACACGAGGCCCGGGCGAGCCTCA
GAGCAGTCCTATTAGCAGGATCGGCGCTTGTGATGTTGACACCTGCCCTGCCGGCAATGGTGCGAGAGGCGCAGGCTCAA
ATGTCGCAGCACGCGATTTCCGTACCGGCCGGTCCGCTTACTCCAGCGCTCAACAGCCTTGCTGCCCAGACGGGCCTCCA
GATTCTGTTCGACGCGTCGGTTGCCCAAAACAAATCAACCCGCGGCGTGAATGGGACGCTGACACCTGAACAGGCCTTGA
AGGCCGTGCTTGCCGGGACAGGCGTCGATGCGCGCTTTGCCGGCGAAAACCGGGTCACCTTGCAGAACGCGACTTCCGCC
TCAGAAAACCCGGAGCAAGAAGGAACCCTGCTCGAACCCATCGTGATCTACGGTGCCCGCAATGCGACCACGCTTGGCGG
TACGACAAGCAGTGTCGCTATTCTCAATGCCGAAAGCCTGGCGAATAGCCAGATCCGCACCACGCAGGAAACGTTTCGTC
GCATGGCGAACACGATGGACAGCGCCACAGTCAACGCTGGTTTCGTTATCCGCGGCATGAGTTCCGAGGGCCTGGTATCG
TCCGGTGGGCCGGCAGGCTCCATCTATATCGATGGCATCCTTCAGACGCGCTACAATGCCCGCTTCGGCGCCCGCAATCT
CTGGGACGTTGAGCAGGTCGAGGTCTATCGCGGCCCGCAATCGACGCTCTCCGGCCGCGCCGCCATGACCGGAGCCGTCT
ATATCAAATCGAAGGATCCGACCTTCGAAAAGGAAGTCGAAGTTTCCACGACCGTTGGTACCGATCATCTTGTGGGCACC
GCCATCACGGTCAACACGCCTATCGTAGAGGATCAGGTCGCGCTGCGGCTCTCCGGGTCCTATGAACGTTCTAGGGCCCA
GCCCAGCTACTCCGATTTCAAGTCATACGACAATTACGACGATCTGATCACTGATATCAGCGGCATTGCGCGCGCCAAGC
TGCTGTTGACGCCGTCAGAGCTGCCGGATACCCGCGCAGTCCTCACCTATTCCTACTCGAAGGACCGGCCGAACGACGCA
CTCGTCGGACTCTATTCGGGACGGGGGGATTTCAATAACGCGCCTGTCACCTACACCGAATATCGCTGGACCGAGGCGCA
TAATCTCGGACTTGAGGTCACCCACGACATTTCTGAAACCCTGCGCTTCACATCGCAGACCGGCTATCAATACGGCATCA
ATAACCGGCGCTCCATTGATTATGGCACCGAAAATGTCGTCAACGGTATCACCGGCGAAGATGACAACTCCATCCTCACC
CAGGAATTCCGCCTGAACTATGAAGGCGATCGTTGGAAATGGGTAACCGGCATCTATGGCAGCTACGAAAAGTGGGATGG
TGCCACGGATATCGTTGCGTTCGATTATTACCAGCAGAATGACACGCAGCACCGCACAACCGCGAACCTGGCCATCTTCG
GTGAAGCGACCTACGAGTTTGCGCCGACCTGGTTTGCGACGCTGGGCGGACGCCTGGATTACCTGAGAGACAAGGACCAC
CAGCAGAATTATTCCGGTCTGATCGATGACTCCCCTGTCCTGACTGGCGACCCGACGTCCCTTACCGAGTACAATTTCGT
GCCTAAAGTCGGCATATCCAAGGAGTTCGGCAGCAACCAGAAGGTGGGGCTCACCTATACGGAAGGCTTCCGCTCGGGTG
GGTCCTATCTCGACCGCGTGACGGGCGAACTCGGCACCTATGATCCCGAATACTCCAAGAACATTGAACTGTCGTACAAG
GGAACACTGCTGGACGACCGCCTGACGTTGAATGCCAATCTGTTCTACACTAAGTATTCGGATCAGCAGGTCGAGATCCG
GCCTGACCCCTCGATCCCCGGTTATCGCATCATTTCGAACGCCGCCACATCTCGCTCCTGGGGTTTTGAAATCGAACCGT
CCATGCAGGTCACGGACCAATTCACCACCTTTGCATCGGTCGGTTACCTCAACACCAAGTTCATCGACTTCAACCATGCA
GCGCTCAGCGAACCGCAGGACGGCAAGTCCTTTCCCGAAGCACCGGAATGGAGCCTGGGCTTTGGCGGTCGTTATGAGTT
CCAAAATGGTGTTTTTGTCGGAGCCGATGCCAAGTACACGACGAGCTATAATTCGCGCTTCGGCACGAACGGCATGTACA
AGATTGATGCGCGCTTCATCGTCAACGCGCAGGTGGGTTTCAAGAAGGACAATTGGCAGGTGACGCTGTTTTCGGAGAAC
CTGACGGATGAAAAATACTTCACCCTGATTGATCCGGATTACTCGCTGCCTTACGGCCAGGCTGGCAAGCGCCGATCATT
CGGATTGAACCTCCGGGCCAAGTTCTGA

Upstream 100 bases:

>100_bases
CTGAATCAGACAGTCTCTCGATTTTTTTGTTGTCGTTTGTCTTCTCGGCAAAACCGGTGACTACTTTTCCCTGACAAACT
TTAAAAAGCTCGAGATTTTT

Downstream 100 bases:

>100_bases
TTATCTCGGGCTGCGGGGGGCATTACCCCCGCAGCCGTTTTCGATTTCCGGCGACAAAATGGTGGCCCTCTTGCGTTTCT
GTCTGTTTCTCCTCGCGTTT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 835; Mature: 834

Protein sequence:

>835_residues
MGSESQTGKINRLPPEHNVALLLTVGCKALSTGEFGGSMTKTFSTTHEARASLRAVLLAGSALVMLTPALPAMVREAQAQ
MSQHAISVPAGPLTPALNSLAAQTGLQILFDASVAQNKSTRGVNGTLTPEQALKAVLAGTGVDARFAGENRVTLQNATSA
SENPEQEGTLLEPIVIYGARNATTLGGTTSSVAILNAESLANSQIRTTQETFRRMANTMDSATVNAGFVIRGMSSEGLVS
SGGPAGSIYIDGILQTRYNARFGARNLWDVEQVEVYRGPQSTLSGRAAMTGAVYIKSKDPTFEKEVEVSTTVGTDHLVGT
AITVNTPIVEDQVALRLSGSYERSRAQPSYSDFKSYDNYDDLITDISGIARAKLLLTPSELPDTRAVLTYSYSKDRPNDA
LVGLYSGRGDFNNAPVTYTEYRWTEAHNLGLEVTHDISETLRFTSQTGYQYGINNRRSIDYGTENVVNGITGEDDNSILT
QEFRLNYEGDRWKWVTGIYGSYEKWDGATDIVAFDYYQQNDTQHRTTANLAIFGEATYEFAPTWFATLGGRLDYLRDKDH
QQNYSGLIDDSPVLTGDPTSLTEYNFVPKVGISKEFGSNQKVGLTYTEGFRSGGSYLDRVTGELGTYDPEYSKNIELSYK
GTLLDDRLTLNANLFYTKYSDQQVEIRPDPSIPGYRIISNAATSRSWGFEIEPSMQVTDQFTTFASVGYLNTKFIDFNHA
ALSEPQDGKSFPEAPEWSLGFGGRYEFQNGVFVGADAKYTTSYNSRFGTNGMYKIDARFIVNAQVGFKKDNWQVTLFSEN
LTDEKYFTLIDPDYSLPYGQAGKRRSFGLNLRAKF

Sequences:

>Translated_835_residues
MGSESQTGKINRLPPEHNVALLLTVGCKALSTGEFGGSMTKTFSTTHEARASLRAVLLAGSALVMLTPALPAMVREAQAQ
MSQHAISVPAGPLTPALNSLAAQTGLQILFDASVAQNKSTRGVNGTLTPEQALKAVLAGTGVDARFAGENRVTLQNATSA
SENPEQEGTLLEPIVIYGARNATTLGGTTSSVAILNAESLANSQIRTTQETFRRMANTMDSATVNAGFVIRGMSSEGLVS
SGGPAGSIYIDGILQTRYNARFGARNLWDVEQVEVYRGPQSTLSGRAAMTGAVYIKSKDPTFEKEVEVSTTVGTDHLVGT
AITVNTPIVEDQVALRLSGSYERSRAQPSYSDFKSYDNYDDLITDISGIARAKLLLTPSELPDTRAVLTYSYSKDRPNDA
LVGLYSGRGDFNNAPVTYTEYRWTEAHNLGLEVTHDISETLRFTSQTGYQYGINNRRSIDYGTENVVNGITGEDDNSILT
QEFRLNYEGDRWKWVTGIYGSYEKWDGATDIVAFDYYQQNDTQHRTTANLAIFGEATYEFAPTWFATLGGRLDYLRDKDH
QQNYSGLIDDSPVLTGDPTSLTEYNFVPKVGISKEFGSNQKVGLTYTEGFRSGGSYLDRVTGELGTYDPEYSKNIELSYK
GTLLDDRLTLNANLFYTKYSDQQVEIRPDPSIPGYRIISNAATSRSWGFEIEPSMQVTDQFTTFASVGYLNTKFIDFNHA
ALSEPQDGKSFPEAPEWSLGFGGRYEFQNGVFVGADAKYTTSYNSRFGTNGMYKIDARFIVNAQVGFKKDNWQVTLFSEN
LTDEKYFTLIDPDYSLPYGQAGKRRSFGLNLRAKF
>Mature_834_residues
GSESQTGKINRLPPEHNVALLLTVGCKALSTGEFGGSMTKTFSTTHEARASLRAVLLAGSALVMLTPALPAMVREAQAQM
SQHAISVPAGPLTPALNSLAAQTGLQILFDASVAQNKSTRGVNGTLTPEQALKAVLAGTGVDARFAGENRVTLQNATSAS
ENPEQEGTLLEPIVIYGARNATTLGGTTSSVAILNAESLANSQIRTTQETFRRMANTMDSATVNAGFVIRGMSSEGLVSS
GGPAGSIYIDGILQTRYNARFGARNLWDVEQVEVYRGPQSTLSGRAAMTGAVYIKSKDPTFEKEVEVSTTVGTDHLVGTA
ITVNTPIVEDQVALRLSGSYERSRAQPSYSDFKSYDNYDDLITDISGIARAKLLLTPSELPDTRAVLTYSYSKDRPNDAL
VGLYSGRGDFNNAPVTYTEYRWTEAHNLGLEVTHDISETLRFTSQTGYQYGINNRRSIDYGTENVVNGITGEDDNSILTQ
EFRLNYEGDRWKWVTGIYGSYEKWDGATDIVAFDYYQQNDTQHRTTANLAIFGEATYEFAPTWFATLGGRLDYLRDKDHQ
QNYSGLIDDSPVLTGDPTSLTEYNFVPKVGISKEFGSNQKVGLTYTEGFRSGGSYLDRVTGELGTYDPEYSKNIELSYKG
TLLDDRLTLNANLFYTKYSDQQVEIRPDPSIPGYRIISNAATSRSWGFEIEPSMQVTDQFTTFASVGYLNTKFIDFNHAA
LSEPQDGKSFPEAPEWSLGFGGRYEFQNGVFVGADAKYTTSYNSRFGTNGMYKIDARFIVNAQVGFKKDNWQVTLFSENL
TDEKYFTLIDPDYSLPYGQAGKRRSFGLNLRAKF

Specific function: Receptor for ferric vibriobactin [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug [H]

EC number: NA

Molecular weight: Translated: 91691; Mature: 91559

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSESQTGKINRLPPEHNVALLLTVGCKALSTGEFGGSMTKTFSTTHEARASLRAVLLAG
CCCCCCCCCEECCCCCCCEEEEEEECCCEECCCCCCCCCCEEHHHHHHHHHHHHHHHHCC
SALVMLTPALPAMVREAQAQMSQHAISVPAGPLTPALNSLAAQTGLQILFDASVAQNKST
CEEEEECCCHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHCCCEEEEECHHHCCCCC
RGVNGTLTPEQALKAVLAGTGVDARFAGENRVTLQNATSASENPEQEGTLLEPIVIYGAR
CCCCCCCCHHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCCCCCCCCEECEEEEEECC
NATTLGGTTSSVAILNAESLANSQIRTTQETFRRMANTMDSATVNAGFVIRGMSSEGLVS
CCEECCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCCCCCC
SGGPAGSIYIDGILQTRYNARFGARNLWDVEQVEVYRGPQSTLSGRAAMTGAVYIKSKDP
CCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHEEEECCCHHHHCCCEEEEEEEEEECCCC
TFEKEVEVSTTVGTDHLVGTAITVNTPIVEDQVALRLSGSYERSRAQPSYSDFKSYDNYD
CCCCEEEEEEECCCCCEEEEEEEECCCCCCCEEEEEECCCCHHHCCCCCHHHHHCCCCHH
DLITDISGIARAKLLLTPSELPDTRAVLTYSYSKDRPNDALVGLYSGRGDFNNAPVTYTE
HHHHHHHHHHEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEE
YRWTEAHNLGLEVTHDISETLRFTSQTGYQYGINNRRSIDYGTENVVNGITGEDDNSILT
EEEEECCCCCCEEECCHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHCCCCCCCCCCEEE
QEFRLNYEGDRWKWVTGIYGSYEKWDGATDIVAFDYYQQNDTQHRTTANLAIFGEATYEF
EEEEECCCCCCEEEEEECCCCCHHCCCCCEEEEEEEECCCCCCCEEEEEEEEEECCCEEE
APTWFATLGGRLDYLRDKDHQQNYSGLIDDSPVLTGDPTSLTEYNFVPKVGISKEFGSNQ
CCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCC
KVGLTYTEGFRSGGSYLDRVTGELGTYDPEYSKNIELSYKGTLLDDRLTLNANLFYTKYS
EEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCEEECCEEEEEEEEEEEECC
DQQVEIRPDPSIPGYRIISNAATSRSWGFEIEPSMQVTDQFTTFASVGYLNTKFIDFNHA
CCEEEECCCCCCCCEEEEECCCCCCCCCEEECCCCEEHHHHHHHHHCCCCEEEEEECCHH
ALSEPQDGKSFPEAPEWSLGFGGRYEFQNGVFVGADAKYTTSYNSRFGTNGMYKIDARFI
HCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCEEEECCCCCCCCCCEEEEEEEEE
VNAQVGFKKDNWQVTLFSENLTDEKYFTLIDPDYSLPYGQAGKRRSFGLNLRAKF
EEEEECCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure 
GSESQTGKINRLPPEHNVALLLTVGCKALSTGEFGGSMTKTFSTTHEARASLRAVLLAG
CCCCCCCCEECCCCCCCEEEEEEECCCEECCCCCCCCCCEEHHHHHHHHHHHHHHHHCC
SALVMLTPALPAMVREAQAQMSQHAISVPAGPLTPALNSLAAQTGLQILFDASVAQNKST
CEEEEECCCHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHCCCEEEEECHHHCCCCC
RGVNGTLTPEQALKAVLAGTGVDARFAGENRVTLQNATSASENPEQEGTLLEPIVIYGAR
CCCCCCCCHHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCCCCCCCCEECEEEEEECC
NATTLGGTTSSVAILNAESLANSQIRTTQETFRRMANTMDSATVNAGFVIRGMSSEGLVS
CCEECCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCCCCCC
SGGPAGSIYIDGILQTRYNARFGARNLWDVEQVEVYRGPQSTLSGRAAMTGAVYIKSKDP
CCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHEEEECCCHHHHCCCEEEEEEEEEECCCC
TFEKEVEVSTTVGTDHLVGTAITVNTPIVEDQVALRLSGSYERSRAQPSYSDFKSYDNYD
CCCCEEEEEEECCCCCEEEEEEEECCCCCCCEEEEEECCCCHHHCCCCCHHHHHCCCCHH
DLITDISGIARAKLLLTPSELPDTRAVLTYSYSKDRPNDALVGLYSGRGDFNNAPVTYTE
HHHHHHHHHHEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEE
YRWTEAHNLGLEVTHDISETLRFTSQTGYQYGINNRRSIDYGTENVVNGITGEDDNSILT
EEEEECCCCCCEEECCHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHCCCCCCCCCCEEE
QEFRLNYEGDRWKWVTGIYGSYEKWDGATDIVAFDYYQQNDTQHRTTANLAIFGEATYEF
EEEEECCCCCCEEEEEECCCCCHHCCCCCEEEEEEEECCCCCCCEEEEEEEEEECCCEEE
APTWFATLGGRLDYLRDKDHQQNYSGLIDDSPVLTGDPTSLTEYNFVPKVGISKEFGSNQ
CCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCC
KVGLTYTEGFRSGGSYLDRVTGELGTYDPEYSKNIELSYKGTLLDDRLTLNANLFYTKYS
EEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCEEECCEEEEEEEEEEEECC
DQQVEIRPDPSIPGYRIISNAATSRSWGFEIEPSMQVTDQFTTFASVGYLNTKFIDFNHA
CCEEEECCCCCCCCEEEEECCCCCCCCCEEECCCCEEHHHHHHHHHCCCCEEEEEECCHH
ALSEPQDGKSFPEAPEWSLGFGGRYEFQNGVFVGADAKYTTSYNSRFGTNGMYKIDARFI
HCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCEEEECCCCCCCCCCEEEEEEEEE
VNAQVGFKKDNWQVTLFSENLTDEKYFTLIDPDYSLPYGQAGKRRSFGLNLRAKF
EEEEECCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1317381 [H]