| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is 222102496
Identifier: 222102496
GI number: 222102496
Start: 91936
End: 92706
Strand: Direct
Name: 222102496
Synonym: Avi_7110
Alternate gene names: NA
Gene position: 91936-92706 (Clockwise)
Preceding gene: 222102495
Following gene: 222102497
Centisome position: 14.55
GC content: 55.64
Gene sequence:
>771_bases ATGCGCGCCATCATGCTTGTAGCCGGTCGAGGTTCACGACTTCGTAATCTTACGGACATGCGACCGAAATGCCTCGTTCC TTTCCGGGGCAGGCCGCTTCTGGAGCTTTCAGTTGAGCGCCTGAAGGCAGGCGGTGTGGAAAAATTCACGTTTGTGGCGG GATACCGTTCCGAGGCAATCGAGGCGTTCATCGAGACGCATGAGATTGATGCCGAAGTCGTCTTGAACCGTGATTGGGAC AGTACGAACATGGTGCAATCGCTGTTTTGCGCGGCGGATCGTCTGGCGGCGGAACCGTGCATCGTCAGCTATGGCGACAT CTTCTTTGAAAGTGGCATTGTGCGGAATCTCATTTCCGCCCAGGGCGACCTTGTACTGGCCTATGATCATAATGGCCGTA CCCTTTGGGAGCGACGCTTCAAGGACCCACTTTCGGATATAGAGAACTTCCGCATTGGTACGGAGGGACGCCTGATCGCG ATTGGCGGGAGGGTGCAAGATATCACGACGGTGCAGGGCCAATACATGGGCCTATTCAAGCTTACGCCGACCGGTCTCGC CGAGATGCAGGATTTTTGCGCAAGCCTTAGTGCAGATCGTCGCCGTTCGATCGATGTGACGAGCACGTTCTCGGCTCTTC TGGGGCGCGGAACGCTGATTCGATGCGTACCCAACCTCGATCCGTGGGGCGAACTCGACTCTCCCGAAGATATTCACTTC TTTGAAGCCTCCACCCCCCTCAACACTCCTGCTTTAGAAAGATCTTACTGA
Upstream 100 bases:
>100_bases CTGTATCAGGGATCATGTGGCACCCCGAGCGCAATGTGGTGCCGGATCAAGCCGATATTGCCTTGTTCAGGGCTAGATTT TCAACCATAGGATGCTATTA
Downstream 100 bases:
>100_bases TGGATCCCGCACTCTGGCTACTTTTCGCGCTTGCCTATCTCGGAATCACCTTTTCGCCCGGTCCTAACGTCCTGATGGTT CTGAACCATACGGCAAAATA
Product: transferase
Products: NA
Alternate protein names: Phosphoenolpyruvate Phosphomutase; Transferase; Sugar Nucleotidyltransferase; Nucleotidyltransferase Family Protein; Glucose-1-Phosphate Cytidylyltransferase; Nucleotide Sugar-1-Phosphate Transferase; Sugar Metabolism Cluster Protein; Sugar Nucleotidyltransferase-Like Protein; Aminotransferase Class I And II; Nucleoside-Diphosphate-Sugar Pyrophosphorylase; Nucleotidyl Transferase WchZ; Sugar-1-Phosphate Nucleotidyltransferase; Histidinol-Phosphate Aminotransferase HisC; LicC Protein; UTP-Glucose-1-Phosphate Uridylyltransferase; Phosphoenolpyruvate Mutase; Hemolysin Erythrocyte Lysis; Nucleotidyl Transferase/Aminotransferase Classes I And II; 2 3-Dimethylmalate Lyase; Choline Kinase; Glucose-1-Phosphate Thymidylyltransferase
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MRAIMLVAGRGSRLRNLTDMRPKCLVPFRGRPLLELSVERLKAGGVEKFTFVAGYRSEAIEAFIETHEIDAEVVLNRDWD STNMVQSLFCAADRLAAEPCIVSYGDIFFESGIVRNLISAQGDLVLAYDHNGRTLWERRFKDPLSDIENFRIGTEGRLIA IGGRVQDITTVQGQYMGLFKLTPTGLAEMQDFCASLSADRRRSIDVTSTFSALLGRGTLIRCVPNLDPWGELDSPEDIHF FEASTPLNTPALERSY
Sequences:
>Translated_256_residues MRAIMLVAGRGSRLRNLTDMRPKCLVPFRGRPLLELSVERLKAGGVEKFTFVAGYRSEAIEAFIETHEIDAEVVLNRDWD STNMVQSLFCAADRLAAEPCIVSYGDIFFESGIVRNLISAQGDLVLAYDHNGRTLWERRFKDPLSDIENFRIGTEGRLIA IGGRVQDITTVQGQYMGLFKLTPTGLAEMQDFCASLSADRRRSIDVTSTFSALLGRGTLIRCVPNLDPWGELDSPEDIHF FEASTPLNTPALERSY >Mature_256_residues MRAIMLVAGRGSRLRNLTDMRPKCLVPFRGRPLLELSVERLKAGGVEKFTFVAGYRSEAIEAFIETHEIDAEVVLNRDWD STNMVQSLFCAADRLAAEPCIVSYGDIFFESGIVRNLISAQGDLVLAYDHNGRTLWERRFKDPLSDIENFRIGTEGRLIA IGGRVQDITTVQGQYMGLFKLTPTGLAEMQDFCASLSADRRRSIDVTSTFSALLGRGTLIRCVPNLDPWGELDSPEDIHF FEASTPLNTPALERSY
Specific function: Unknown
COG id: COG1213
COG function: function code M; Predicted sugar nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28613; Mature: 28613
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAIMLVAGRGSRLRNLTDMRPKCLVPFRGRPLLELSVERLKAGGVEKFTFVAGYRSEAI CCEEEEEECCCCHHCCHHHCCCCEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHH EAFIETHEIDAEVVLNRDWDSTNMVQSLFCAADRLAAEPCIVSYGDIFFESGIVRNLISA HHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHC QGDLVLAYDHNGRTLWERRFKDPLSDIENFRIGTEGRLIAIGGRVQDITTVQGQYMGLFK CCCEEEEEECCCCHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCCCEEEEECCCEEEEEE LTPTGLAEMQDFCASLSADRRRSIDVTSTFSALLGRGTLIRCVPNLDPWGELDSPEDIHF ECCCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEE FEASTPLNTPALERSY EECCCCCCCCCCCCCC >Mature Secondary Structure MRAIMLVAGRGSRLRNLTDMRPKCLVPFRGRPLLELSVERLKAGGVEKFTFVAGYRSEAI CCEEEEEECCCCHHCCHHHCCCCEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHH EAFIETHEIDAEVVLNRDWDSTNMVQSLFCAADRLAAEPCIVSYGDIFFESGIVRNLISA HHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHC QGDLVLAYDHNGRTLWERRFKDPLSDIENFRIGTEGRLIAIGGRVQDITTVQGQYMGLFK CCCEEEEEECCCCHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCCCEEEEECCCEEEEEE LTPTGLAEMQDFCASLSADRRRSIDVTSTFSALLGRGTLIRCVPNLDPWGELDSPEDIHF ECCCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEE FEASTPLNTPALERSY EECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA