| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is 222102494
Identifier: 222102494
GI number: 222102494
Start: 90249
End: 91325
Strand: Direct
Name: 222102494
Synonym: Avi_7108
Alternate gene names: NA
Gene position: 90249-91325 (Clockwise)
Preceding gene: 222102493
Following gene: 222102495
Centisome position: 14.28
GC content: 54.13
Gene sequence:
>1077_bases ATGTATGAGCAAAAGAGCGATCTTAAGTCTGCAAACCTGATGGACGCCACACGGCTTCTGTCATGGGTGCGGCACAACGC AGCACCGTTGTTTTCCGGCGCTGCGCGGTCGGCATTTATTGCGACTTCTATTCTGAGGGTCCTTGCACGTACCGGTTATA TCCACGAAGCCGTGATTGAGGATATCTCCCGTAGCGCGCAGGCGATTGGTTCGGAACTGGTTCGCGATTTCCAGAGACTG GAGCGCGACGTCTTCATGGCGCGATACGGGCATATTCGCCCGGGAACCTTCGACATCACCGTGCCGCGATACGATCAAGA ACCGGAGAAGTATTTTTCATTTCTTGATGCCACCCAAGCGCAACCCGACGTGCGAGACACAGGAAGCTTTGTAGAGCTTT CGGCGAGTGACATCGCGCGGATTGATGCGCATTTCGCCGCGCTTGGATACAACTTTAACTGGGCGCGCTTCCGCACTTTT GCAGCGAGTGCCATTCATGCGCGGGAATATGTAAAGTTTCTCTACACAAAACAGGTTTCAGATGCGCTTGAAATCATTTC GAATGTCGGGGTGCAGTACGGTTGCAACAGGGAAGAGATGTCGTTTCTAACGCTCTCGGATATCGAGAACATGCTCGACT TCACATCCGACATAGACCGGCGGATCCGCGAAATCTCGGCGTCGAACCGGGTCTCGTGGCAGCAGAGCCTGCCGGTGCGA TTGCCTGATTTGCTGACCTCACCTGACGATATTTTCGGTTTTGAGGTGGAAGCTTCGGCACCAAATTTCGTGACCTATGA AACGGTTCAGGCCCCGGTCGCGCTGTCTCTCGACAATGACCTGAGGGGCAAGATCGTGTTCATCGAAACCGCTGATCCGG GATACGATTGGGTGTTTACTCGAGGTATTGCGGGTTTCATCACGCGATATGGAGGCGAGAATTCTCATATGGCGATCCGT GCTCGTGAATTCGGGATTCCGGCGGTGGTTGGGGCCGGGCGGCATTATGACAAATGGAAGACCTTTTCGGTGTTGCGGTG TGATTGCCGCGCCCGTCGGGTTGAGCCAATCATATGA
Upstream 100 bases:
>100_bases GGCTGGGTATTTGGAAGATCTCCTGAAACTCACTAACGGCGTCGTGGCCGAAGGCGGTGCCTATGACAGCATCATGGCCG ACGTGGTGCGTCTGGAAGCG
Downstream 100 bases:
>100_bases GCCGCTTTGTGGCAATCACCATGCGTGACGCCGTGTTGCCTGAGCGGAACGAGCACCGGGACTGCCTTGAAACCGGGTGG TGGACTTTCCTGGAGGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MYEQKSDLKSANLMDATRLLSWVRHNAAPLFSGAARSAFIATSILRVLARTGYIHEAVIEDISRSAQAIGSELVRDFQRL ERDVFMARYGHIRPGTFDITVPRYDQEPEKYFSFLDATQAQPDVRDTGSFVELSASDIARIDAHFAALGYNFNWARFRTF AASAIHAREYVKFLYTKQVSDALEIISNVGVQYGCNREEMSFLTLSDIENMLDFTSDIDRRIREISASNRVSWQQSLPVR LPDLLTSPDDIFGFEVEASAPNFVTYETVQAPVALSLDNDLRGKIVFIETADPGYDWVFTRGIAGFITRYGGENSHMAIR AREFGIPAVVGAGRHYDKWKTFSVLRCDCRARRVEPII
Sequences:
>Translated_358_residues MYEQKSDLKSANLMDATRLLSWVRHNAAPLFSGAARSAFIATSILRVLARTGYIHEAVIEDISRSAQAIGSELVRDFQRL ERDVFMARYGHIRPGTFDITVPRYDQEPEKYFSFLDATQAQPDVRDTGSFVELSASDIARIDAHFAALGYNFNWARFRTF AASAIHAREYVKFLYTKQVSDALEIISNVGVQYGCNREEMSFLTLSDIENMLDFTSDIDRRIREISASNRVSWQQSLPVR LPDLLTSPDDIFGFEVEASAPNFVTYETVQAPVALSLDNDLRGKIVFIETADPGYDWVFTRGIAGFITRYGGENSHMAIR AREFGIPAVVGAGRHYDKWKTFSVLRCDCRARRVEPII >Mature_358_residues MYEQKSDLKSANLMDATRLLSWVRHNAAPLFSGAARSAFIATSILRVLARTGYIHEAVIEDISRSAQAIGSELVRDFQRL ERDVFMARYGHIRPGTFDITVPRYDQEPEKYFSFLDATQAQPDVRDTGSFVELSASDIARIDAHFAALGYNFNWARFRTF AASAIHAREYVKFLYTKQVSDALEIISNVGVQYGCNREEMSFLTLSDIENMLDFTSDIDRRIREISASNRVSWQQSLPVR LPDLLTSPDDIFGFEVEASAPNFVTYETVQAPVALSLDNDLRGKIVFIETADPGYDWVFTRGIAGFITRYGGENSHMAIR AREFGIPAVVGAGRHYDKWKTFSVLRCDCRARRVEPII
Specific function: Unknown
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40516; Mature: 40516
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYEQKSDLKSANLMDATRLLSWVRHNAAPLFSGAARSAFIATSILRVLARTGYIHEAVIE CCCCHHHCCCCHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHH DISRSAQAIGSELVRDFQRLERDVFMARYGHIRPGTFDITVPRYDQEPEKYFSFLDATQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCC QPDVRDTGSFVELSASDIARIDAHFAALGYNFNWARFRTFAASAIHAREYVKFLYTKQVS CCCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DALEIISNVGVQYGCNREEMSFLTLSDIENMLDFTSDIDRRIREISASNRVSWQQSLPVR HHHHHHHHCCCCCCCCHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCC LPDLLTSPDDIFGFEVEASAPNFVTYETVQAPVALSLDNDLRGKIVFIETADPGYDWVFT CHHHHCCCCHHCCEEEECCCCCEEEEEEECCCEEEEECCCCCCEEEEEEECCCCCCHHHH RGIAGFITRYGGENSHMAIRAREFGIPAVVGAGRHYDKWKTFSVLRCDCRARRVEPII HHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCCCCCCHHHHHHEEECHHHCCCCCCC >Mature Secondary Structure MYEQKSDLKSANLMDATRLLSWVRHNAAPLFSGAARSAFIATSILRVLARTGYIHEAVIE CCCCHHHCCCCHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHH DISRSAQAIGSELVRDFQRLERDVFMARYGHIRPGTFDITVPRYDQEPEKYFSFLDATQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCC QPDVRDTGSFVELSASDIARIDAHFAALGYNFNWARFRTFAASAIHAREYVKFLYTKQVS CCCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DALEIISNVGVQYGCNREEMSFLTLSDIENMLDFTSDIDRRIREISASNRVSWQQSLPVR HHHHHHHHCCCCCCCCHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCC LPDLLTSPDDIFGFEVEASAPNFVTYETVQAPVALSLDNDLRGKIVFIETADPGYDWVFT CHHHHCCCCHHCCEEEECCCCCEEEEEEECCCEEEEECCCCCCEEEEEEECCCCCCHHHH RGIAGFITRYGGENSHMAIRAREFGIPAVVGAGRHYDKWKTFSVLRCDCRARRVEPII HHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCCCCCCHHHHHHEEECHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA