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The map label for this gene is rhtB [H]

Identifier: 222102489

GI number: 222102489

Start: 85515

End: 86114

Strand: Reverse

Name: rhtB [H]

Synonym: Avi_7098

Alternate gene names: 222102489

Gene position: 86114-85515 (Counterclockwise)

Preceding gene: 222102490

Following gene: 222102479

Centisome position: 13.63

GC content: 47.67

Gene sequence:

>600_bases
ATGACAAACCTTTGGATATACGTAGGTGCGTGCCTCGCCATCATCGCCATTCCAGGACCAGCGCTTATCTACATTCTGTC
CCGAACCGTCGAAGGTGGCTTCCGCGCAGGCTTCTTATCAGCATCAGGTATCGCTGTCGGCGCATTGGCGAATGCGCTTG
CGTCCGCTGTGGGGCTTTCATTGATATTCAAGACAATTCCTGCGTCGTTGACCGTCGTGAAATATTTGGGCGCAGCCTAT
TTGTTATTTCTTGCATATAAGGCCGTCTCCCCTGGTGCATCATCGGCAACACAAATTGACTCCGACCAGACAAAATTCTT
TCGCCAAGGCGTCATCGTGTCATTGCTGAATCCCAAGGTCACACTTTTCTTTGCGGCGTTCCTCCCGACGTTTATTGATC
CAAGCCAAGGTTATTTCGTGCAAACCAGCTTTCTTGCGGTTACTTTCGTTATAATCGCGTTTTTGTTTGATATTTCGTTG
GTTCTGACTTCAGGATATACACGACAATACTTCTTAAGGCAATCTGGCGCAAACAACGTGCTGTTTAAGTATGCCTCGGC
AATTTGCCTAGTATTCGTGGCAAGTTTTGCTATTCGCTAA

Upstream 100 bases:

>100_bases
GCCACTTTGATGCACGATTTTGCGAGTCACCTGCAATTCATCATTGCATCAAACGTTCTCTCTTTTGAATCCACTTTAGA
ACCTCGGAAAAGCTAACTCT

Downstream 100 bases:

>100_bases
TTGAAGCCGAAAATACATAGCCGGGCTTGTCGCAAATTTTCGGGCTTAACCGCATGTTGACCATAGGTATGGAATTTGCC
GCTCCGAAAGTTGCGGAGCG

Product: RhtB family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MTNLWIYVGACLAIIAIPGPALIYILSRTVEGGFRAGFLSASGIAVGALANALASAVGLSLIFKTIPASLTVVKYLGAAY
LLFLAYKAVSPGASSATQIDSDQTKFFRQGVIVSLLNPKVTLFFAAFLPTFIDPSQGYFVQTSFLAVTFVIIAFLFDISL
VLTSGYTRQYFLRQSGANNVLFKYASAICLVFVASFAIR

Sequences:

>Translated_199_residues
MTNLWIYVGACLAIIAIPGPALIYILSRTVEGGFRAGFLSASGIAVGALANALASAVGLSLIFKTIPASLTVVKYLGAAY
LLFLAYKAVSPGASSATQIDSDQTKFFRQGVIVSLLNPKVTLFFAAFLPTFIDPSQGYFVQTSFLAVTFVIIAFLFDISL
VLTSGYTRQYFLRQSGANNVLFKYASAICLVFVASFAIR
>Mature_198_residues
TNLWIYVGACLAIIAIPGPALIYILSRTVEGGFRAGFLSASGIAVGALANALASAVGLSLIFKTIPASLTVVKYLGAAYL
LFLAYKAVSPGASSATQIDSDQTKFFRQGVIVSLLNPKVTLFFAAFLPTFIDPSQGYFVQTSFLAVTFVIIAFLFDISLV
LTSGYTRQYFLRQSGANNVLFKYASAICLVFVASFAIR

Specific function: Exporter of leucine [H]

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1788099, Length=175, Percent_Identity=32, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI48994979, Length=138, Percent_Identity=31.1594202898551, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21257; Mature: 21126

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLWIYVGACLAIIAIPGPALIYILSRTVEGGFRAGFLSASGIAVGALANALASAVGLS
CCCEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LIFKTIPASLTVVKYLGAAYLLFLAYKAVSPGASSATQIDSDQTKFFRQGVIVSLLNPKV
HHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHH
TLFFAAFLPTFIDPSQGYFVQTSFLAVTFVIIAFLFDISLVLTSGYTRQYFLRQSGANNV
HHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHH
LFKYASAICLVFVASFAIR
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNLWIYVGACLAIIAIPGPALIYILSRTVEGGFRAGFLSASGIAVGALANALASAVGLS
CCEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LIFKTIPASLTVVKYLGAAYLLFLAYKAVSPGASSATQIDSDQTKFFRQGVIVSLLNPKV
HHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHH
TLFFAAFLPTFIDPSQGYFVQTSFLAVTFVIIAFLFDISLVLTSGYTRQYFLRQSGANNV
HHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHH
LFKYASAICLVFVASFAIR
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA