| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is 222102490
Identifier: 222102490
GI number: 222102490
Start: 86119
End: 86688
Strand: Reverse
Name: 222102490
Synonym: Avi_7100
Alternate gene names: NA
Gene position: 86688-86119 (Counterclockwise)
Preceding gene: 222102491
Following gene: 222102489
Centisome position: 13.72
GC content: 47.37
Gene sequence:
>570_bases ATGTTTGATCGCTACACACTTGATTCAAAAGAATATCATCAAATTGATACTCTGGTTTCATCTATCAAGCATAGAGCTCT ACGCGCGTGGCTTTCTGAACTCGCTGGCGATGATGGATATTGGGTAAATGATAGTTGCGGCATGCCTTGTTGGGTTGCGC CGATGCACCAGCATGCGCGGCTTTGGAATGCTCTTTCCAATTCAAATGCTAGTGCGATGGAAGCGATCAAGGAGTTGTGG ACGGCAAATCCCATTTTGATTGGTGGAAGTAACCGCGTTGATACGACAATCCTTCAATTTGGCAAAGGGCGGCTGTTTGC TAAAGAAGGTGCTGATGGGCTGCTTTTCCTTCATGCCACGGGCAAAAAAGGCGAACCACCGGTCACAATCCTCGTGAAGA TGTCGCAAGCAGCTCGCGACGAGCACCTTTACTTCGCCGTCATCATAGCCATCAAGCAATACGTTCCTTCCAGGGCCACT TTGATGCACGATTTTGCGAGTCACCTGCAATTCATCATTGCATCAAACGTTCTCTCTTTTGAATCCACTTTAGAACCTCG GAAAAGCTAA
Upstream 100 bases:
>100_bases TCATTTCGGGGTCCCGCACTGTCCTAGGCTTTGTACAGCCGCACGATCATGGACCAAACCGTAAAATCTCCGGCGTCAAG TAAACAGGCTCGAAACATAT
Downstream 100 bases:
>100_bases CTCTATGACAAACCTTTGGATATACGTAGGTGCGTGCCTCGCCATCATCGCCATTCCAGGACCAGCGCTTATCTACATTC TGTCCCGAACCGTCGAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MFDRYTLDSKEYHQIDTLVSSIKHRALRAWLSELAGDDGYWVNDSCGMPCWVAPMHQHARLWNALSNSNASAMEAIKELW TANPILIGGSNRVDTTILQFGKGRLFAKEGADGLLFLHATGKKGEPPVTILVKMSQAARDEHLYFAVIIAIKQYVPSRAT LMHDFASHLQFIIASNVLSFESTLEPRKS
Sequences:
>Translated_189_residues MFDRYTLDSKEYHQIDTLVSSIKHRALRAWLSELAGDDGYWVNDSCGMPCWVAPMHQHARLWNALSNSNASAMEAIKELW TANPILIGGSNRVDTTILQFGKGRLFAKEGADGLLFLHATGKKGEPPVTILVKMSQAARDEHLYFAVIIAIKQYVPSRAT LMHDFASHLQFIIASNVLSFESTLEPRKS >Mature_189_residues MFDRYTLDSKEYHQIDTLVSSIKHRALRAWLSELAGDDGYWVNDSCGMPCWVAPMHQHARLWNALSNSNASAMEAIKELW TANPILIGGSNRVDTTILQFGKGRLFAKEGADGLLFLHATGKKGEPPVTILVKMSQAARDEHLYFAVIIAIKQYVPSRAT LMHDFASHLQFIIASNVLSFESTLEPRKS
Specific function: Unknown
COG id: COG4448
COG function: function code E; L-asparaginase II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21146; Mature: 21146
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDRYTLDSKEYHQIDTLVSSIKHRALRAWLSELAGDDGYWVNDSCGMPCWVAPMHQHAR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECHHHHHHH LWNALSNSNASAMEAIKELWTANPILIGGSNRVDTTILQFGKGRLFAKEGADGLLFLHAT HHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCEEEEECCCCEEEEEEEC GKKGEPPVTILVKMSQAARDEHLYFAVIIAIKQYVPSRATLMHDFASHLQFIIASNVLSF CCCCCCCEEEEEEECHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH ESTLEPRKS HHCCCCCCC >Mature Secondary Structure MFDRYTLDSKEYHQIDTLVSSIKHRALRAWLSELAGDDGYWVNDSCGMPCWVAPMHQHAR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECHHHHHHH LWNALSNSNASAMEAIKELWTANPILIGGSNRVDTTILQFGKGRLFAKEGADGLLFLHAT HHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCEEEEECCCCEEEEEEEC GKKGEPPVTILVKMSQAARDEHLYFAVIIAIKQYVPSRATLMHDFASHLQFIIASNVLSF CCCCCCCEEEEEEECHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH ESTLEPRKS HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA