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The map label for this gene is ameR

Identifier: 222102479

GI number: 222102479

Start: 76852

End: 77577

Strand: Reverse

Name: ameR

Synonym: Avi_7086

Alternate gene names: NA

Gene position: 77577-76852 (Counterclockwise)

Preceding gene: 222102489

Following gene: 222102478

Centisome position: 12.28

GC content: 53.44

Gene sequence:

>726_bases
ATGAAGCATATCGAGGATAACGCGGGCAGCGAGCGAAAACCTTTGGCAGGAGCTGCAAAGTCTGTTCCCGCCGTCGCGGC
GGACAAGCCTTATCATCGCAAAAATCTGCGTGAGGATTTGCTTAGATCAGCACTTGAACTGACTGTGGAACGGGACGGCC
CAGCCTTCAGCCTCAGGGAGCTTGCCATGCGCGAAAAGGTAAGCCACACCGCTGTCTATCGCCACTTTTCCGATAAGGCG
TCTCTCTTCGCCGAACTGTCGAGTGAGGGTTTTCGCCAGTTGGCCCTTTATCAAAATCGCACGATTGAGGCCCCTGACCT
GCCTCCATTGGCGAGGCTGGAACAAATGGGGGCAACCTATGTGCGTTTTGCCATGGAAAACGTTGGCTTCTTCCGCGTGA
TGTTTGATGTAAATCTGGCGGGTGAATGGGAAGAAGCCCGCAAGGGTGAACGGACAGCCTTTGGAAACCTCGTAGGACTG
GTGCGCCAATGCCAGTCTGAGGGAGACATCATTGATGCTGACCCACGCGCCATTGCGACCTATCTTGTTCTGTCACCGCA
TGGACTTGCCCATTTCAACAATATTGGCCATCTGACACATCTGTTGCAAACAAGCATGACGCTTGATCAACTCGCAACAC
AAGTCTTTCGGCTCACCCTCGCGCCATTCCTCACCAAGCCCTATTCGGAGCAAGATGTACGTGCGCTGGTCAATAGCATC
TTTTGA

Upstream 100 bases:

>100_bases
GCATGCGTTGGCTGCGTAAAAAGGGTTGGTGTGTTGTGTGAACGCGCGTAGTAGAGAAAACGGCGAGCGACATCAAAAAA
CGATCGCCCCAAGAGGGACC

Downstream 100 bases:

>100_bases
ACAACTGCACTGATAGCGGAACCGACCCCTATTGCTGGGCACAGCCAGCGCCGCAACACTGGCCGCAAGCGTCGATGTCC
GGTGCCTGCGTTTGCGAAAC

Product: transcriptional regulator TetR family

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Regulatory Protein Tetr; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR-Family

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKHIEDNAGSERKPLAGAAKSVPAVAADKPYHRKNLREDLLRSALELTVERDGPAFSLRELAMREKVSHTAVYRHFSDKA
SLFAELSSEGFRQLALYQNRTIEAPDLPPLARLEQMGATYVRFAMENVGFFRVMFDVNLAGEWEEARKGERTAFGNLVGL
VRQCQSEGDIIDADPRAIATYLVLSPHGLAHFNNIGHLTHLLQTSMTLDQLATQVFRLTLAPFLTKPYSEQDVRALVNSI
F

Sequences:

>Translated_241_residues
MKHIEDNAGSERKPLAGAAKSVPAVAADKPYHRKNLREDLLRSALELTVERDGPAFSLRELAMREKVSHTAVYRHFSDKA
SLFAELSSEGFRQLALYQNRTIEAPDLPPLARLEQMGATYVRFAMENVGFFRVMFDVNLAGEWEEARKGERTAFGNLVGL
VRQCQSEGDIIDADPRAIATYLVLSPHGLAHFNNIGHLTHLLQTSMTLDQLATQVFRLTLAPFLTKPYSEQDVRALVNSI
F
>Mature_241_residues
MKHIEDNAGSERKPLAGAAKSVPAVAADKPYHRKNLREDLLRSALELTVERDGPAFSLRELAMREKVSHTAVYRHFSDKA
SLFAELSSEGFRQLALYQNRTIEAPDLPPLARLEQMGATYVRFAMENVGFFRVMFDVNLAGEWEEARKGERTAFGNLVGL
VRQCQSEGDIIDADPRAIATYLVLSPHGLAHFNNIGHLTHLLQTSMTLDQLATQVFRLTLAPFLTKPYSEQDVRALVNSI
F

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26997; Mature: 26997

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHIEDNAGSERKPLAGAAKSVPAVAADKPYHRKNLREDLLRSALELTVERDGPAFSLRE
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LAMREKVSHTAVYRHFSDKASLFAELSSEGFRQLALYQNRTIEAPDLPPLARLEQMGATY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCHHH
VRFAMENVGFFRVMFDVNLAGEWEEARKGERTAFGNLVGLVRQCQSEGDIIDADPRAIAT
HHHHHHCCCEEEEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCEECCCHHHHHH
YLVLSPHGLAHFNNIGHLTHLLQTSMTLDQLATQVFRLTLAPFLTKPYSEQDVRALVNSI
HHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
F
C
>Mature Secondary Structure
MKHIEDNAGSERKPLAGAAKSVPAVAADKPYHRKNLREDLLRSALELTVERDGPAFSLRE
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LAMREKVSHTAVYRHFSDKASLFAELSSEGFRQLALYQNRTIEAPDLPPLARLEQMGATY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCHHH
VRFAMENVGFFRVMFDVNLAGEWEEARKGERTAFGNLVGLVRQCQSEGDIIDADPRAIAT
HHHHHHCCCEEEEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCEECCCHHHHHH
YLVLSPHGLAHFNNIGHLTHLLQTSMTLDQLATQVFRLTLAPFLTKPYSEQDVRALVNSI
HHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA