| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221636313
Identifier: 221636313
GI number: 221636313
Start: 889355
End: 889660
Strand: Reverse
Name: 221636313
Synonym: trd_A0907
Alternate gene names: NA
Gene position: 889660-889355 (Counterclockwise)
Preceding gene: 221636315
Following gene: 221636312
Centisome position: 96.94
GC content: 66.34
Gene sequence:
>306_bases ATGAACGAGTGTGCCGCTCGCGCGCTCCTCACCGGAATGTGGGCAGCCGCTACGCCGTTGGCTGGCTACCCGATGGGGAA GCGAGCGCGTTCATCCTGTCGCTGGCACGACACTGGCTGTCACCCCGTGGCGTTCCGTGCGAGTCTACGACCGGAACGGC TCCCTCTCCGTTCCCGCCGGTCGCACACGACGAGTCGGTTCTTTTCCTCGGCGCTGCGGACCATCGTCGGCCGGATCGAC GACCAGTCTTTTCGAGGGGCACGCACCGTCCGGAGGGAGGAGCACGAGAGCCATCGCTGCATGTGA
Upstream 100 bases:
>100_bases TGGGCGATACGAGCCGAATCTGCCGCGCCCTTGCTACCGGCGGCTGCACTGATGCGTCCCGTGAGCGAGTCGCCTCGGAA GTCATGCCGGGCGGGGATCG
Downstream 100 bases:
>100_bases GGAAATCTTGACACCTATACGATACATGGATAAAGTTACAGGCGGTTCACCCTCGCGCGCGGGGCGTACGAGCCACCGGC GAGAATTAGGGGCGCACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MNECAARALLTGMWAAATPLAGYPMGKRARSSCRWHDTGCHPVAFRASLRPERLPLRSRRSHTTSRFFSSALRTIVGRID DQSFRGARTVRREEHESHRCM
Sequences:
>Translated_101_residues MNECAARALLTGMWAAATPLAGYPMGKRARSSCRWHDTGCHPVAFRASLRPERLPLRSRRSHTTSRFFSSALRTIVGRID DQSFRGARTVRREEHESHRCM >Mature_101_residues MNECAARALLTGMWAAATPLAGYPMGKRARSSCRWHDTGCHPVAFRASLRPERLPLRSRRSHTTSRFFSSALRTIVGRID DQSFRGARTVRREEHESHRCM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11513; Mature: 11513
Theoretical pI: Translated: 11.97; Mature: 11.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNECAARALLTGMWAAATPLAGYPMGKRARSSCRWHDTGCHPVAFRASLRPERLPLRSRR CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHH SHTTSRFFSSALRTIVGRIDDQSFRGARTVRREEHESHRCM HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNECAARALLTGMWAAATPLAGYPMGKRARSSCRWHDTGCHPVAFRASLRPERLPLRSRR CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHH SHTTSRFFSSALRTIVGRIDDQSFRGARTVRREEHESHRCM HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA