Click here to switch to the map view.

The map label for this gene is 221636312

Identifier: 221636312

GI number: 221636312

Start: 887828

End: 889141

Strand: Reverse

Name: 221636312

Synonym: trd_A0906

Alternate gene names: NA

Gene position: 889141-887828 (Counterclockwise)

Preceding gene: 221636313

Following gene: 221636311

Centisome position: 96.88

GC content: 60.05

Gene sequence:

>1314_bases
ATGAATCGCCGGCGTTTTCTCGCCTTTTCGGTATCCGCGCTCGCCAGTAGTCTTCTCGCGGCTTGTGGCGGTGGTGCAGG
CCCGACACCGACACCTACGACGGCACCGTCGCCGACACCAGCCAGTGCACCCGTTCAGACGCCAGTGGCTGCGGCTTCAC
CGACTCCTCAGGTCGCTGCCACGCCGACCGTCGCCCGGCCGGCAACCCCCTTCAAGATCGGTGTCGTGGTCGCTCAGACG
GGGAATCTGGCATCTTCCGGTCGGCGCCACATCGAGGGGATGCAGCTCGCACTCGACGAGTTGGGCAACACTGCTGCTGG
TCGTCAATTGCAACTGTTGCCAGCCGATTCGGCTGGGAATCCGGATCAGGCGAAGACGCATGTCCGGCGACTGGTCGAAA
GCGACAAGGTCGATGTCATCACCGGCTTCACCATAACGCCTGAACTGACTGCGGTGCGTGATTACCTGCACGAGCAAAAG
CAAGTCACCATTGTCTCGATCGCCGGCTGGCCACCCCTGACCCGGGATCCCAAGGTCCGCAGTCCATACATCTTCCGCTC
GTCCTTCTGCCAGGGGCAGTACGAGTTTATCCAAGCCAAGTGGGCGTATGAGAAGGGTGGCTATCGGAATATCGCTCTCA
TGGCCCCCGACTACACGACTGGCCGAACGGTAGCTCAGATCTTCGGCGATTACTTCAAGAAGTCGGGTGGTCAAATCGCT
GCTGAGGTCTATCCGCCGCTCGATACGACCGATTTCGGGCCCTATCTCCAGCGCATCCTTCAGGATGCTGCGAACGCCGA
TGCCGTGTGGGCCTGGTTCATCGGTGCCGACGCTATCCGTTTCATGACCCAGTACCAGGAGTTCGGCCTCAAGGATCGCT
ATCCCCTGCTCGGCGGTGCCGAGGTCGGTGATGACCCCTATCTCCCGGAGGTCGGCGAAGCAGCTCTCGGCATCGTCAGT
GCGATCAACTACGCAGCACGTTATGATCGGCCACAGAACAAGGAGTTCGTCGCCAAGTTCCAGCAGAAGTTCAATCGTCT
CCCTGGTCACCTGGAGTACTGGGGCTACATCACCGTCATGATCCTCGCGCATGCTCTGGAGACCGTTAAGGGAGATACCA
GTGACGAGGACGCCTTCCTGCAAGCGATCCGCAATGTCCGATTCCAGGGCCCGATGAACGAAGTTCGCTTCCACCCTGAA
GCCCAAGGTGTGATCACCACGGTGCTCGTGCGCCGCGTCGAAAAGTTGCCCGATGGGACGCTCGGCAACGTGGTGCTCGA
CGAATATCCGAATATCGATGATCTCTCCTTCTGA

Upstream 100 bases:

>100_bases
GAGGACAGTCGCGGCGTGAGCACCACGAGTGCTCGGATGCGAGGGTGGCCGACTTGTCGTGTTGTCCGTCGGTTGTCGTG
TCATGCGGGGAGGAGACAGG

Downstream 100 bases:

>100_bases
CCGGTCCGGCTCGGTCTCTCGGCACTGGCGGTCCTGGGTGCTTCCGCCCGGGACCGCTCTGTTTTGGTCGACCCTTCTCG
TCGGCTCTCCTTCGCTTCGT

Product: receptor family ligand binding region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MNRRRFLAFSVSALASSLLAACGGGAGPTPTPTTAPSPTPASAPVQTPVAAASPTPQVAATPTVARPATPFKIGVVVAQT
GNLASSGRRHIEGMQLALDELGNTAAGRQLQLLPADSAGNPDQAKTHVRRLVESDKVDVITGFTITPELTAVRDYLHEQK
QVTIVSIAGWPPLTRDPKVRSPYIFRSSFCQGQYEFIQAKWAYEKGGYRNIALMAPDYTTGRTVAQIFGDYFKKSGGQIA
AEVYPPLDTTDFGPYLQRILQDAANADAVWAWFIGADAIRFMTQYQEFGLKDRYPLLGGAEVGDDPYLPEVGEAALGIVS
AINYAARYDRPQNKEFVAKFQQKFNRLPGHLEYWGYITVMILAHALETVKGDTSDEDAFLQAIRNVRFQGPMNEVRFHPE
AQGVITTVLVRRVEKLPDGTLGNVVLDEYPNIDDLSF

Sequences:

>Translated_437_residues
MNRRRFLAFSVSALASSLLAACGGGAGPTPTPTTAPSPTPASAPVQTPVAAASPTPQVAATPTVARPATPFKIGVVVAQT
GNLASSGRRHIEGMQLALDELGNTAAGRQLQLLPADSAGNPDQAKTHVRRLVESDKVDVITGFTITPELTAVRDYLHEQK
QVTIVSIAGWPPLTRDPKVRSPYIFRSSFCQGQYEFIQAKWAYEKGGYRNIALMAPDYTTGRTVAQIFGDYFKKSGGQIA
AEVYPPLDTTDFGPYLQRILQDAANADAVWAWFIGADAIRFMTQYQEFGLKDRYPLLGGAEVGDDPYLPEVGEAALGIVS
AINYAARYDRPQNKEFVAKFQQKFNRLPGHLEYWGYITVMILAHALETVKGDTSDEDAFLQAIRNVRFQGPMNEVRFHPE
AQGVITTVLVRRVEKLPDGTLGNVVLDEYPNIDDLSF
>Mature_437_residues
MNRRRFLAFSVSALASSLLAACGGGAGPTPTPTTAPSPTPASAPVQTPVAAASPTPQVAATPTVARPATPFKIGVVVAQT
GNLASSGRRHIEGMQLALDELGNTAAGRQLQLLPADSAGNPDQAKTHVRRLVESDKVDVITGFTITPELTAVRDYLHEQK
QVTIVSIAGWPPLTRDPKVRSPYIFRSSFCQGQYEFIQAKWAYEKGGYRNIALMAPDYTTGRTVAQIFGDYFKKSGGQIA
AEVYPPLDTTDFGPYLQRILQDAANADAVWAWFIGADAIRFMTQYQEFGLKDRYPLLGGAEVGDDPYLPEVGEAALGIVS
AINYAARYDRPQNKEFVAKFQQKFNRLPGHLEYWGYITVMILAHALETVKGDTSDEDAFLQAIRNVRFQGPMNEVRFHPE
AQGVITTVLVRRVEKLPDGTLGNVVLDEYPNIDDLSF

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 47666; Mature: 47666

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRRFLAFSVSALASSLLAACGGGAGPTPTPTTAPSPTPASAPVQTPVAAASPTPQVAA
CCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPTVARPATPFKIGVVVAQTGNLASSGRRHIEGMQLALDELGNTAAGRQLQLLPADSAGN
CCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
PDQAKTHVRRLVESDKVDVITGFTITPELTAVRDYLHEQKQVTIVSIAGWPPLTRDPKVR
CHHHHHHHHHHHHCCCEEEEECCEECCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC
SPYIFRSSFCQGQYEFIQAKWAYEKGGYRNIALMAPDYTTGRTVAQIFGDYFKKSGGQIA
CCCHHHHHHCCCHHHHHEEEHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEE
AEVYPPLDTTDFGPYLQRILQDAANADAVWAWFIGADAIRFMTQYQEFGLKDRYPLLGGA
EEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCC
EVGDDPYLPEVGEAALGIVSAINYAARYDRPQNKEFVAKFQQKFNRLPGHLEYWGYITVM
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
ILAHALETVKGDTSDEDAFLQAIRNVRFQGPMNEVRFHPEAQGVITTVLVRRVEKLPDGT
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHEECCCHHHHHHHHHHHHHHHCCCCC
LGNVVLDEYPNIDDLSF
CCCEECCCCCCCCCCCC
>Mature Secondary Structure
MNRRRFLAFSVSALASSLLAACGGGAGPTPTPTTAPSPTPASAPVQTPVAAASPTPQVAA
CCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPTVARPATPFKIGVVVAQTGNLASSGRRHIEGMQLALDELGNTAAGRQLQLLPADSAGN
CCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
PDQAKTHVRRLVESDKVDVITGFTITPELTAVRDYLHEQKQVTIVSIAGWPPLTRDPKVR
CHHHHHHHHHHHHCCCEEEEECCEECCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC
SPYIFRSSFCQGQYEFIQAKWAYEKGGYRNIALMAPDYTTGRTVAQIFGDYFKKSGGQIA
CCCHHHHHHCCCHHHHHEEEHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEE
AEVYPPLDTTDFGPYLQRILQDAANADAVWAWFIGADAIRFMTQYQEFGLKDRYPLLGGA
EEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCC
EVGDDPYLPEVGEAALGIVSAINYAARYDRPQNKEFVAKFQQKFNRLPGHLEYWGYITVM
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
ILAHALETVKGDTSDEDAFLQAIRNVRFQGPMNEVRFHPEAQGVITTVLVRRVEKLPDGT
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHEECCCHHHHHHHHHHHHHHHCCCCC
LGNVVLDEYPNIDDLSF
CCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA