Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635825

Identifier: 221635825

GI number: 221635825

Start: 408079

End: 408219

Strand: Reverse

Name: 221635825

Synonym: trd_A0419

Alternate gene names: NA

Gene position: 408219-408079 (Counterclockwise)

Preceding gene: 221635829

Following gene: 221635820

Centisome position: 44.48

GC content: 63.12

Gene sequence:

>141_bases
GTGGCTCGTCCACGATATCCTCAGCTCGTGCAGTATTCGATCCGAATCCGATGCTCCACGGTCGACCCCCGCTTGGCTTC
TGTCCCCACGATCCGTCGACGCTCGCTGCTCGGTGTGACGGACCGTTCCCGCCATCCCTAG

Upstream 100 bases:

>100_bases
CCCGTCCACCGTGACCTCGAAACGCCCACCCGACGAGGGGACCAAAGCGATCTCACCGATCTGAAGTTCGTACTTGTCCA
AAAGCAACTCCACCGCACGG

Downstream 100 bases:

>100_bases
ATTCCCCAGTATACCCCGGCCGCGCTCGTGGGGGAGATGCTCGCTCGTCTCAGCACGATGCGCTAGGCTCCTCGGCTCCA
GACCACGCCCACCGCTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 46; Mature: 45

Protein sequence:

>46_residues
MARPRYPQLVQYSIRIRCSTVDPRLASVPTIRRRSLLGVTDRSRHP

Sequences:

>Translated_46_residues
MARPRYPQLVQYSIRIRCSTVDPRLASVPTIRRRSLLGVTDRSRHP
>Mature_45_residues
ARPRYPQLVQYSIRIRCSTVDPRLASVPTIRRRSLLGVTDRSRHP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5376; Mature: 5245

Theoretical pI: Translated: 12.33; Mature: 12.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPRYPQLVQYSIRIRCSTVDPRLASVPTIRRRSLLGVTDRSRHP
CCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCC
>Mature Secondary Structure 
ARPRYPQLVQYSIRIRCSTVDPRLASVPTIRRRSLLGVTDRSRHP
CCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA