| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635829
Identifier: 221635829
GI number: 221635829
Start: 410708
End: 410983
Strand: Reverse
Name: 221635829
Synonym: trd_A0423
Alternate gene names: NA
Gene position: 410983-410708 (Counterclockwise)
Preceding gene: 221635831
Following gene: 221635825
Centisome position: 44.78
GC content: 61.96
Gene sequence:
>276_bases GTGAACAAGCTCGCCGCTCGCTTGCTCGACCAGCTCAAGAAGCACCGTTTTCGACCGGTCATGCTCTCCGGTGACGGTTA CGTCCTGGAGATTGTTCCCTATCACGGGAAGATCGAGGCCGGTTTCACGCTCTGGCGTCTCGAAGGTGGCGAACTGGTTC CCGTCGCGAGTGGCCATACCGAGAACGGGCATCTCCTCACGGCTGAGGGCTTCGCCTTGCAGCTTCCGGCAGACGTCGAG CGCACCATGCTCACGCTCCTCTCGCGCAAGCGGTGA
Upstream 100 bases:
>100_bases CAATGGGTGAGCCCGGCGTGACCGCCCTCGCTGCGGCAGTCTCGCGACCGGCCGTACCTCGATCCGATCGACGATCGACT CGTGAAGGAGTACTCGGTTC
Downstream 100 bases:
>100_bases GCCGCTTGGCCATTGCTCCGGCTACGCAGGCGTGCGACGCCTTCTTCGCCTCGGATCGGCATCCGGATCGACCGAGCGAG GTACCGGCCGCTCGAGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MNKLAARLLDQLKKHRFRPVMLSGDGYVLEIVPYHGKIEAGFTLWRLEGGELVPVASGHTENGHLLTAEGFALQLPADVE RTMLTLLSRKR
Sequences:
>Translated_91_residues MNKLAARLLDQLKKHRFRPVMLSGDGYVLEIVPYHGKIEAGFTLWRLEGGELVPVASGHTENGHLLTAEGFALQLPADVE RTMLTLLSRKR >Mature_91_residues MNKLAARLLDQLKKHRFRPVMLSGDGYVLEIVPYHGKIEAGFTLWRLEGGELVPVASGHTENGHLLTAEGFALQLPADVE RTMLTLLSRKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10180; Mature: 10180
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLAARLLDQLKKHRFRPVMLSGDGYVLEIVPYHGKIEAGFTLWRLEGGELVPVASGHT CCHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCEEECCEEEEEECCCCEEEEECCCC ENGHLLTAEGFALQLPADVERTMLTLLSRKR CCCEEEEECCEEEECCCCHHHHHHHHHHCCC >Mature Secondary Structure MNKLAARLLDQLKKHRFRPVMLSGDGYVLEIVPYHGKIEAGFTLWRLEGGELVPVASGHT CCHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCEEECCEEEEEECCCCEEEEECCCC ENGHLLTAEGFALQLPADVERTMLTLLSRKR CCCEEEEECCEEEECCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA