Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635829

Identifier: 221635829

GI number: 221635829

Start: 410708

End: 410983

Strand: Reverse

Name: 221635829

Synonym: trd_A0423

Alternate gene names: NA

Gene position: 410983-410708 (Counterclockwise)

Preceding gene: 221635831

Following gene: 221635825

Centisome position: 44.78

GC content: 61.96

Gene sequence:

>276_bases
GTGAACAAGCTCGCCGCTCGCTTGCTCGACCAGCTCAAGAAGCACCGTTTTCGACCGGTCATGCTCTCCGGTGACGGTTA
CGTCCTGGAGATTGTTCCCTATCACGGGAAGATCGAGGCCGGTTTCACGCTCTGGCGTCTCGAAGGTGGCGAACTGGTTC
CCGTCGCGAGTGGCCATACCGAGAACGGGCATCTCCTCACGGCTGAGGGCTTCGCCTTGCAGCTTCCGGCAGACGTCGAG
CGCACCATGCTCACGCTCCTCTCGCGCAAGCGGTGA

Upstream 100 bases:

>100_bases
CAATGGGTGAGCCCGGCGTGACCGCCCTCGCTGCGGCAGTCTCGCGACCGGCCGTACCTCGATCCGATCGACGATCGACT
CGTGAAGGAGTACTCGGTTC

Downstream 100 bases:

>100_bases
GCCGCTTGGCCATTGCTCCGGCTACGCAGGCGTGCGACGCCTTCTTCGCCTCGGATCGGCATCCGGATCGACCGAGCGAG
GTACCGGCCGCTCGAGACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MNKLAARLLDQLKKHRFRPVMLSGDGYVLEIVPYHGKIEAGFTLWRLEGGELVPVASGHTENGHLLTAEGFALQLPADVE
RTMLTLLSRKR

Sequences:

>Translated_91_residues
MNKLAARLLDQLKKHRFRPVMLSGDGYVLEIVPYHGKIEAGFTLWRLEGGELVPVASGHTENGHLLTAEGFALQLPADVE
RTMLTLLSRKR
>Mature_91_residues
MNKLAARLLDQLKKHRFRPVMLSGDGYVLEIVPYHGKIEAGFTLWRLEGGELVPVASGHTENGHLLTAEGFALQLPADVE
RTMLTLLSRKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10180; Mature: 10180

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLAARLLDQLKKHRFRPVMLSGDGYVLEIVPYHGKIEAGFTLWRLEGGELVPVASGHT
CCHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCEEECCEEEEEECCCCEEEEECCCC
ENGHLLTAEGFALQLPADVERTMLTLLSRKR
CCCEEEEECCEEEECCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNKLAARLLDQLKKHRFRPVMLSGDGYVLEIVPYHGKIEAGFTLWRLEGGELVPVASGHT
CCHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCEEECCEEEEEECCCCEEEEECCCC
ENGHLLTAEGFALQLPADVERTMLTLLSRKR
CCCEEEEECCEEEECCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA