| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
Click here to switch to the map view.
The map label for this gene is thrA [C]
Identifier: 221635820
GI number: 221635820
Start: 400731
End: 402161
Strand: Reverse
Name: thrA [C]
Synonym: trd_A0414
Alternate gene names: 221635820
Gene position: 402161-400731 (Counterclockwise)
Preceding gene: 221635825
Following gene: 221635818
Centisome position: 43.82
GC content: 66.74
Gene sequence:
>1431_bases ATGCGGGTGATGAAGTTCGGGGGAACGTCGGTCGGCAATGCCGTCGCGATCGATCGCACGGCACGGATCATCGCCGACGC CTATCGCGGTGACGGCCGCCTCGTTGCCGTCGTCTCGGCGATGAGCGGCGTCACCAACCAGCTCATCGCGGCCGCTCAAG CTGCAGCCGAGGGAGACGAGCAGGCAGCAGCGAGGCTCCAACAGGAACTCGTCGAGCGACATCGCGGGGCGGCCGCGGAA CTGATCCCGACCGCAGCGCGCCTGGAGGCGACGGTGAGCCGCCTGACCGAACTCGCCACCCGTTGTGCGCGCCTCGTCGA GTCGGTCCACGTACTCCGCGACCTCTCGCCGCGTGCTCAGGACTGGATCGTCTCCTTCGGCGAGCGGATGAGTGCAGTCC TCATAGCAGCTGTCCTCGAGGAACGCGGTATCCCAGCCGTGCCGGTCGACAGCGACAAGGTCATCGTGACCGATGACCAC TTCGGGAGCGCCAACCCGTTGCTCGACGAAACCCGGGCGCGCGCCGAGGCGATCCTCGTCCCGCTTCTCGAAGCTGGCAA GCTGCCCGTCGTCACCGGCTTCTTCGGTGCCACGCCGAAGGGTGCGGTCACCACGCTCGGCCGCGGCGGGTCCGACTTCT CCGCCTCGATCCTCGCTCACGCGCTCGACGCCGACGAGGTGTGGATCTGGACCGACGTCGATGGCGTCATGACGGCTGAT CCGCGACTCGTCCCCAGTGCGCGCACGCTTCCCGCGATCTCCTTCGCCGAGGCGACCGAACTCGCCTACTTCGGCGCCAA GGTGATCCACCCGCGCACCATGCAACCGGCTGCCGAGCGTGGCATTCCGATCTGGATCAAGAACACCTTCAACCCCGAGC ACCCGGGCACACGTATCGGCCCGGACACCAGCTCGAACGGTTCGGTGGTCAAGGCGATCACCGCGATTCCCGGCGTGAGC GTCATCACCGTCGAGGGATCCGGCTTCCTCAGCGTCGCCGACGTCACTGCCCGCGTCTTCGAGACCGTCGGCCGGACTGG CGTCAACGTCTTTATGGTCTTCCAGGCGTCGTCCCAGCACAGCCTGGGTTTTGTCGTCCGGCGCACCGATGCCAGCAAAG TGTTGCGTGCGCTGGAGCGGGAGTTCGAACTCGATCTCCTCAAGGGACGCGTCGCACGCCTCTGGGAAGAACCCGGTATG GCCATCGTCGCCGTCGTCGGTGCCGGGATGCGCGGGACACCCGGTGTCGCCGGCCGCGTCTTCGGGACCCTCGGCCAACA TCGCATCAACATCGTCGCCATCGCGCAAGGGTCGTCGGAACTCAACATTTCATTCGTGATCCGCGAAGACGAGGTCGCAC GCGCCGTTCCAGCGATTCACGACGCGTTCGGGCTCGGGGGATCTGCTGGCGAACGCTCGGCTGGTTCCTGA
Upstream 100 bases:
>100_bases TCGTCCCGCATGCTGTGAGACGCGTTCGAGTATCCTTTCCCCTTCGAGAAGCTTTGGAGCACGTATGGAGCCGAAGGCTC CCAGAAAGGATTCCAACGCG
Downstream 100 bases:
>100_bases TGCCGGCACGCACGACGGGAGCGCTCGCTGAGCAACGCCCAGAGCGATATCGCCAGGATCACGAGCGGTAACACCACGAA TCCGATCAGAAAGATGAGCG
Product: asparate kinase, monofunctional class
Products: NA
Alternate protein names: Aspartate kinase [H]
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MRVMKFGGTSVGNAVAIDRTARIIADAYRGDGRLVAVVSAMSGVTNQLIAAAQAAAEGDEQAAARLQQELVERHRGAAAE LIPTAARLEATVSRLTELATRCARLVESVHVLRDLSPRAQDWIVSFGERMSAVLIAAVLEERGIPAVPVDSDKVIVTDDH FGSANPLLDETRARAEAILVPLLEAGKLPVVTGFFGATPKGAVTTLGRGGSDFSASILAHALDADEVWIWTDVDGVMTAD PRLVPSARTLPAISFAEATELAYFGAKVIHPRTMQPAAERGIPIWIKNTFNPEHPGTRIGPDTSSNGSVVKAITAIPGVS VITVEGSGFLSVADVTARVFETVGRTGVNVFMVFQASSQHSLGFVVRRTDASKVLRALEREFELDLLKGRVARLWEEPGM AIVAVVGAGMRGTPGVAGRVFGTLGQHRINIVAIAQGSSELNISFVIREDEVARAVPAIHDAFGLGGSAGERSAGS
Sequences:
>Translated_476_residues MRVMKFGGTSVGNAVAIDRTARIIADAYRGDGRLVAVVSAMSGVTNQLIAAAQAAAEGDEQAAARLQQELVERHRGAAAE LIPTAARLEATVSRLTELATRCARLVESVHVLRDLSPRAQDWIVSFGERMSAVLIAAVLEERGIPAVPVDSDKVIVTDDH FGSANPLLDETRARAEAILVPLLEAGKLPVVTGFFGATPKGAVTTLGRGGSDFSASILAHALDADEVWIWTDVDGVMTAD PRLVPSARTLPAISFAEATELAYFGAKVIHPRTMQPAAERGIPIWIKNTFNPEHPGTRIGPDTSSNGSVVKAITAIPGVS VITVEGSGFLSVADVTARVFETVGRTGVNVFMVFQASSQHSLGFVVRRTDASKVLRALEREFELDLLKGRVARLWEEPGM AIVAVVGAGMRGTPGVAGRVFGTLGQHRINIVAIAQGSSELNISFVIREDEVARAVPAIHDAFGLGGSAGERSAGS >Mature_476_residues MRVMKFGGTSVGNAVAIDRTARIIADAYRGDGRLVAVVSAMSGVTNQLIAAAQAAAEGDEQAAARLQQELVERHRGAAAE LIPTAARLEATVSRLTELATRCARLVESVHVLRDLSPRAQDWIVSFGERMSAVLIAAVLEERGIPAVPVDSDKVIVTDDH FGSANPLLDETRARAEAILVPLLEAGKLPVVTGFFGATPKGAVTTLGRGGSDFSASILAHALDADEVWIWTDVDGVMTAD PRLVPSARTLPAISFAEATELAYFGAKVIHPRTMQPAAERGIPIWIKNTFNPEHPGTRIGPDTSSNGSVVKAITAIPGVS VITVEGSGFLSVADVTARVFETVGRTGVNVFMVFQASSQHSLGFVVRRTDASKVLRALEREFELDLLKGRVARLWEEPGM AIVAVVGAGMRGTPGVAGRVFGTLGQHRINIVAIAQGSSELNISFVIREDEVARAVPAIHDAFGLGGSAGERSAGS
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ACT domains [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=465, Percent_Identity=37.6344086021505, Blast_Score=280, Evalue=2e-76, Organism=Escherichia coli, GI1790455, Length=468, Percent_Identity=34.6153846153846, Blast_Score=199, Evalue=3e-52, Organism=Escherichia coli, GI1790376, Length=429, Percent_Identity=29.1375291375291, Blast_Score=140, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6320893, Length=507, Percent_Identity=30.7692307692308, Blast_Score=201, Evalue=2e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR001048 - InterPro: IPR005260 - InterPro: IPR001341 - InterPro: IPR018042 [H]
Pfam domain/function: PF00696 AA_kinase; PF01842 ACT [H]
EC number: =2.7.2.4 [H]
Molecular weight: Translated: 50128; Mature: 50128
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVMKFGGTSVGNAVAIDRTARIIADAYRGDGRLVAVVSAMSGVTNQLIAAAQAAAEGDE CEEEEECCCCCCCEEEECHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHH QAAARLQQELVERHRGAAAELIPTAARLEATVSRLTELATRCARLVESVHVLRDLSPRAQ HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH DWIVSFGERMSAVLIAAVLEERGIPAVPVDSDKVIVTDDHFGSANPLLDETRARAEAILV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH PLLEAGKLPVVTGFFGATPKGAVTTLGRGGSDFSASILAHALDADEVWIWTDVDGVMTAD HHHCCCCCCEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEECC PRLVPSARTLPAISFAEATELAYFGAKVIHPRTMQPAAERGIPIWIKNTFNPEHPGTRIG CCCCCCCCCCCCEEHHHHHHHHHHCHHEECCCCCCHHHHCCCEEEEECCCCCCCCCCCCC PDTSSNGSVVKAITAIPGVSVITVEGSGFLSVADVTARVFETVGRTGVNVFMVFQASSQH CCCCCCCCEEEEEECCCCCEEEEECCCCCEEHHHHHHHHHHHHCCCCCEEEEEEECCCCC SLGFVVRRTDASKVLRALEREFELDLLKGRVARLWEEPGMAIVAVVGAGMRGTPGVAGRV CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHH FGTLGQHRINIVAIAQGSSELNISFVIREDEVARAVPAIHDAFGLGGSAGERSAGS HHHCCCCEEEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRVMKFGGTSVGNAVAIDRTARIIADAYRGDGRLVAVVSAMSGVTNQLIAAAQAAAEGDE CEEEEECCCCCCCEEEECHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHH QAAARLQQELVERHRGAAAELIPTAARLEATVSRLTELATRCARLVESVHVLRDLSPRAQ HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH DWIVSFGERMSAVLIAAVLEERGIPAVPVDSDKVIVTDDHFGSANPLLDETRARAEAILV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH PLLEAGKLPVVTGFFGATPKGAVTTLGRGGSDFSASILAHALDADEVWIWTDVDGVMTAD HHHCCCCCCEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEECC PRLVPSARTLPAISFAEATELAYFGAKVIHPRTMQPAAERGIPIWIKNTFNPEHPGTRIG CCCCCCCCCCCCEEHHHHHHHHHHCHHEECCCCCCHHHHCCCEEEEECCCCCCCCCCCCC PDTSSNGSVVKAITAIPGVSVITVEGSGFLSVADVTARVFETVGRTGVNVFMVFQASSQH CCCCCCCCEEEEEECCCCCEEEEECCCCCEEHHHHHHHHHHHHCCCCCEEEEEEECCCCC SLGFVVRRTDASKVLRALEREFELDLLKGRVARLWEEPGMAIVAVVGAGMRGTPGVAGRV CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHH FGTLGQHRINIVAIAQGSSELNISFVIREDEVARAVPAIHDAFGLGGSAGERSAGS HHHCCCCEEEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]