Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

Click here to switch to the map view.

The map label for this gene is 221635745

Identifier: 221635745

GI number: 221635745

Start: 327394

End: 327651

Strand: Reverse

Name: 221635745

Synonym: trd_A0339

Alternate gene names: NA

Gene position: 327651-327394 (Counterclockwise)

Preceding gene: 221635746

Following gene: 221635744

Centisome position: 35.7

GC content: 57.36

Gene sequence:

>258_bases
ATGAGCCACGAGATCCATGACTCACATGACCGCATCACTCACGGTGTCGAAGTAGCGAGCGAGACGATCGTTATCAAGAA
CGAGTTCGCAGAAGCGCACGTCCGTAAGGTGCGAACACGCAACGGCGAGCGCCTCGAGATCCACTCACCCAAACTCGGGT
ACACCATTCGCCTGGATCCTCTGGAACTCGAAGCGATCAGTTGGCAACCAGTCGACACGTTTTCGCGGATGCTCGAAAAC
CCCTGGGGGCCAGCGTGA

Upstream 100 bases:

>100_bases
GGCTGGAGGATCGCTCATCGCACCATCATCATCGATCACAGTGTCCTTCAGGTGCGCAACCTTTCCTTCTTCCTGTGATG
ACGAGACGGGAGGGGCTCAG

Downstream 100 bases:

>100_bases
CTGTCCCGACCGATCCGAACTGTTTCCTCAAGGCACTCGACGGCCAGGTCGCACTCATCGTTGGCGCGACATCAGGGATC
GGCCGTGCTGTTGTCGACGC

Product: dihydrodiol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MSHEIHDSHDRITHGVEVASETIVIKNEFAEAHVRKVRTRNGERLEIHSPKLGYTIRLDPLELEAISWQPVDTFSRMLEN
PWGPA

Sequences:

>Translated_85_residues
MSHEIHDSHDRITHGVEVASETIVIKNEFAEAHVRKVRTRNGERLEIHSPKLGYTIRLDPLELEAISWQPVDTFSRMLEN
PWGPA
>Mature_84_residues
SHEIHDSHDRITHGVEVASETIVIKNEFAEAHVRKVRTRNGERLEIHSPKLGYTIRLDPLELEAISWQPVDTFSRMLENP
WGPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9796; Mature: 9665

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHEIHDSHDRITHGVEVASETIVIKNEFAEAHVRKVRTRNGERLEIHSPKLGYTIRLDP
CCCCCCCCCHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCEEEEECC
LELEAISWQPVDTFSRMLENPWGPA
EEEEEECCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SHEIHDSHDRITHGVEVASETIVIKNEFAEAHVRKVRTRNGERLEIHSPKLGYTIRLDP
CCCCCCCCHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCEEEEECC
LELEAISWQPVDTFSRMLENPWGPA
EEEEEECCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA