| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is echA8 [H]
Identifier: 221635740
GI number: 221635740
Start: 321677
End: 322393
Strand: Reverse
Name: echA8 [H]
Synonym: trd_A0334
Alternate gene names: 221635740
Gene position: 322393-321677 (Counterclockwise)
Preceding gene: 221635741
Following gene: 221635739
Centisome position: 35.13
GC content: 59.14
Gene sequence:
>717_bases ATGAATAATCATTTTCCCTATCAGAAGATCCGAATTCAGCAAGAGAATAATGTCACCGTGCTCACGCTTGCAGATCCCGA CACCCATAATGCTCTTTCCAATGAGTTGCTCGGGGAATTGTGCGACGCCCTTTCGCGCGTGAGCAGCACAGTCCTCCTCC TGAACGCAGAGGGGGATCATTTCTCGATCGGTCGACCGCCCCAATCGTACAGCGCAGCCCCTGAGACCTGGATGAAGGGG TACTACCTCGTGATGCGCGCCAATGAACTTTTGATGGGGTTTCCGGGTGTGACGATCGCAGCAGTTCAAGGGCACGCAAG GGGTGCCGGCTGCAGCCTCGCCGGACGCTGTGATCTGGTCCTCGCTGCCGAGACCGCAACGTTCTCCTTCCCGGAGCTGC GCGCAGGAGTGCCGCCGGTCATCGTCGCATCCTATTACTCCCGCAAGTTACCGTGGCACGCCTTTCTCCGGCTCGCTCTG ACTGGGCAGGAAGTGAGCGCAGCGGAGGCTTGTCGGCTCGCTCTGGTTACCGAAGTGGTACCCGACCACGAACTCTTCCA GCGCGCCCGAGAACTAGCTGATGATCTCGCCAAGATCGATGCTGGCGCTCTGGCCACCTTGAAGCATTTCCTGCTCTCGA GTGAAAGTGCGAGCACACCCCAGGCGAACCGCCTCGCCTATGCCGCTTTGCTGGAAACCCTTGCCTCCCGAGTGTAG
Upstream 100 bases:
>100_bases TTGCAGCCGTCATCATCGATGGTGCGATCCGGACACGCCGAAGCCGCAATACACCCCCCTCACGTCGTGAGGTGCTCGTG AAGGAGAGAGGAAGTAACCC
Downstream 100 bases:
>100_bases TCAGCCTGAGGAGGAGACCGATGAGTGATCTGCTGGTCACGCTCCAGACTTTGGACGACACAGCGATCGTCACGCTCAAT CGTCCAGAAAAGCTCAACGC
Product: enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MNNHFPYQKIRIQQENNVTVLTLADPDTHNALSNELLGELCDALSRVSSTVLLLNAEGDHFSIGRPPQSYSAAPETWMKG YYLVMRANELLMGFPGVTIAAVQGHARGAGCSLAGRCDLVLAAETATFSFPELRAGVPPVIVASYYSRKLPWHAFLRLAL TGQEVSAAEACRLALVTEVVPDHELFQRARELADDLAKIDAGALATLKHFLLSSESASTPQANRLAYAALLETLASRV
Sequences:
>Translated_238_residues MNNHFPYQKIRIQQENNVTVLTLADPDTHNALSNELLGELCDALSRVSSTVLLLNAEGDHFSIGRPPQSYSAAPETWMKG YYLVMRANELLMGFPGVTIAAVQGHARGAGCSLAGRCDLVLAAETATFSFPELRAGVPPVIVASYYSRKLPWHAFLRLAL TGQEVSAAEACRLALVTEVVPDHELFQRARELADDLAKIDAGALATLKHFLLSSESASTPQANRLAYAALLETLASRV >Mature_238_residues MNNHFPYQKIRIQQENNVTVLTLADPDTHNALSNELLGELCDALSRVSSTVLLLNAEGDHFSIGRPPQSYSAAPETWMKG YYLVMRANELLMGFPGVTIAAVQGHARGAGCSLAGRCDLVLAAETATFSFPELRAGVPPVIVASYYSRKLPWHAFLRLAL TGQEVSAAEACRLALVTEVVPDHELFQRARELADDLAKIDAGALATLKHFLLSSESASTPQANRLAYAALLETLASRV
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI45643119, Length=219, Percent_Identity=28.310502283105, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI260275230, Length=219, Percent_Identity=28.310502283105, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI260274832, Length=219, Percent_Identity=28.310502283105, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI31542718, Length=234, Percent_Identity=26.0683760683761, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI194097323, Length=231, Percent_Identity=25.5411255411255, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1787659, Length=219, Percent_Identity=28.310502283105, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI221142681, Length=150, Percent_Identity=32.6666666666667, Blast_Score=66, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17549921, Length=214, Percent_Identity=26.6355140186916, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI25145438, Length=227, Percent_Identity=29.5154185022026, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI20129971, Length=208, Percent_Identity=30.2884615384615, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI24653477, Length=208, Percent_Identity=30.2884615384615, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI19922422, Length=237, Percent_Identity=26.1603375527426, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 25762; Mature: 25762
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNHFPYQKIRIQQENNVTVLTLADPDTHNALSNELLGELCDALSRVSSTVLLLNAEGDH CCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCE FSIGRPPQSYSAAPETWMKGYYLVMRANELLMGFPGVTIAAVQGHARGAGCSLAGRCDLV EECCCCCCCCCCCCHHHHCCEEEEEEECHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEE LAAETATFSFPELRAGVPPVIVASYYSRKLPWHAFLRLALTGQEVSAAEACRLALVTEVV EEECCCCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHC PDHELFQRARELADDLAKIDAGALATLKHFLLSSESASTPQANRLAYAALLETLASRV CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNNHFPYQKIRIQQENNVTVLTLADPDTHNALSNELLGELCDALSRVSSTVLLLNAEGDH CCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCE FSIGRPPQSYSAAPETWMKGYYLVMRANELLMGFPGVTIAAVQGHARGAGCSLAGRCDLV EECCCCCCCCCCCCHHHHCCEEEEEEECHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEE LAAETATFSFPELRAGVPPVIVASYYSRKLPWHAFLRLALTGQEVSAAEACRLALVTEVV EEECCCCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHC PDHELFQRARELADDLAKIDAGALATLKHFLLSSESASTPQANRLAYAALLETLASRV CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]