Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635555

Identifier: 221635555

GI number: 221635555

Start: 139314

End: 139835

Strand: Reverse

Name: 221635555

Synonym: trd_A0149

Alternate gene names: NA

Gene position: 139835-139314 (Counterclockwise)

Preceding gene: 221635559

Following gene: 221635552

Centisome position: 15.24

GC content: 64.75

Gene sequence:

>522_bases
GTGCCCCTGCAGAAGAGCGTTGGGCTCACGAAAAGCGCGCGAGCGATCGGTTCCCGCTCGTTACCAGGTCGTCGGGTCCT
TTTCGCAGAAACGGGACGCGCGCCACACGAACGCATCCACAGCCTGCGCCACGTCACCGCGCCTTCGGCAGCCCTACCCG
CACGAGCGAGAACGAAAACTGCCGCGGTTCCCGCAGTCTCGCGCGATCACCGTCGCTCCGAAGCCCACTGCCGTCAGGGA
AACGACTCTCCGGACCGCCATGCAGCGCACACTCACCAGCACGAGCGCCTCGTAGGCCAGTCACGGTGGTGGCTCCCATC
CTCTACGGCTGGCAGGGACGCTCTCGGGTCCACTTTCTTCGCGAATTTCTCCAGGTTCCGCGGCCCTCTGACCGTTCGGT
TGTTGCCCTCGACGACCGCGAGCGCGGGAGCATCGCTTTGCCATGACGATTTTCTACATCGAGACCAGTCCGGAGAACTC
CACCGACTGTCGCGGGAACGAGCGGCGCACTCTATGCGCTGA

Upstream 100 bases:

>100_bases
CGAAACCTGCCATCTCGCTGGGATCCCACCCGGCCGAGAAGGCACCCGACCCGAACCAGGGCAGATCAGCCGAGCGCACG
CTTTCGCGTTCCGTCCCGTT

Downstream 100 bases:

>100_bases
ACTGGTCGAGGAACTGGGCGAGCGTGCGAGACTCGGATGCAGGAGCCCGGTCGCTCACGGTGCCGGCTCGCTCCGTCCCG
GTACCACGCCGAGGAGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MPLQKSVGLTKSARAIGSRSLPGRRVLFAETGRAPHERIHSLRHVTAPSAALPARARTKTAAVPAVSRDHRRSEAHCRQG
NDSPDRHAAHTHQHERLVGQSRWWLPSSTAGRDALGSTFFANFSRFRGPLTVRLLPSTTASAGASLCHDDFLHRDQSGEL
HRLSRERAAHSMR

Sequences:

>Translated_173_residues
MPLQKSVGLTKSARAIGSRSLPGRRVLFAETGRAPHERIHSLRHVTAPSAALPARARTKTAAVPAVSRDHRRSEAHCRQG
NDSPDRHAAHTHQHERLVGQSRWWLPSSTAGRDALGSTFFANFSRFRGPLTVRLLPSTTASAGASLCHDDFLHRDQSGEL
HRLSRERAAHSMR
>Mature_172_residues
PLQKSVGLTKSARAIGSRSLPGRRVLFAETGRAPHERIHSLRHVTAPSAALPARARTKTAAVPAVSRDHRRSEAHCRQGN
DSPDRHAAHTHQHERLVGQSRWWLPSSTAGRDALGSTFFANFSRFRGPLTVRLLPSTTASAGASLCHDDFLHRDQSGELH
RLSRERAAHSMR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19082; Mature: 18950

Theoretical pI: Translated: 12.26; Mature: 12.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLQKSVGLTKSARAIGSRSLPGRRVLFAETGRAPHERIHSLRHVTAPSAALPARARTKT
CCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
AAVPAVSRDHRRSEAHCRQGNDSPDRHAAHTHQHERLVGQSRWWLPSSTAGRDALGSTFF
HHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
ANFSRFRGPLTVRLLPSTTASAGASLCHDDFLHRDQSGELHRLSRERAAHSMR
HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PLQKSVGLTKSARAIGSRSLPGRRVLFAETGRAPHERIHSLRHVTAPSAALPARARTKT
CCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
AAVPAVSRDHRRSEAHCRQGNDSPDRHAAHTHQHERLVGQSRWWLPSSTAGRDALGSTFF
HHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
ANFSRFRGPLTVRLLPSTTASAGASLCHDDFLHRDQSGELHRLSRERAAHSMR
HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA