Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635552

Identifier: 221635552

GI number: 221635552

Start: 136922

End: 137194

Strand: Reverse

Name: 221635552

Synonym: trd_A0146

Alternate gene names: NA

Gene position: 137194-136922 (Counterclockwise)

Preceding gene: 221635555

Following gene: 221635551

Centisome position: 14.95

GC content: 70.7

Gene sequence:

>273_bases
GTGGCTCCGACGCTGTCTCCACCCGCTCTGCGACCGCCACCCGACTGTTCTGTCCCTTCGCCACGCTCGCTCCCTCCCGG
CCTCGGCCGCTACGATCGCCCCCCACCGTCCGATCGCGCGGCGGAAGCTAGTTCCGCCCGACCGAGAACGAGCGGTACCG
ATCCCTGTCGAGCTGCGCTGTCCAGCCCCGCGCCTCGACCGAGCCAGCCAGCACAGCCCGTGCCGGGAAACGGCTCAGCT
GCGATGAACCAGTCGGTGCACCCGATGCGCTGA

Upstream 100 bases:

>100_bases
TGGCGATGATCGTCCAAATGATCAGCCCCACGACGTTGATGCCGGCGAACGTCACGAACACCCGAAACCCCCACCCAGAG
CGGAACTCGTTACCCGAAGA

Downstream 100 bases:

>100_bases
GCTTCTCCCTGCCAGTGCGCCGACGCGTCCGCGTGATCTCGCCACTCTCCTGACAAAGAGCGAGGCAGAGAGCGAGATCG
CCGCGGGTCCCCTCCGCGGC

Product: hydroxyproline-rich glycoprotein family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MAPTLSPPALRPPPDCSVPSPRSLPPGLGRYDRPPPSDRAAEASSARPRTSGTDPCRAALSSPAPRPSQPAQPVPGNGSA
AMNQSVHPMR

Sequences:

>Translated_90_residues
MAPTLSPPALRPPPDCSVPSPRSLPPGLGRYDRPPPSDRAAEASSARPRTSGTDPCRAALSSPAPRPSQPAQPVPGNGSA
AMNQSVHPMR
>Mature_89_residues
APTLSPPALRPPPDCSVPSPRSLPPGLGRYDRPPPSDRAAEASSARPRTSGTDPCRAALSSPAPRPSQPAQPVPGNGSAA
MNQSVHPMR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9255; Mature: 9124

Theoretical pI: Translated: 11.56; Mature: 11.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPTLSPPALRPPPDCSVPSPRSLPPGLGRYDRPPPSDRAAEASSARPRTSGTDPCRAAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
SSPAPRPSQPAQPVPGNGSAAMNQSVHPMR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
APTLSPPALRPPPDCSVPSPRSLPPGLGRYDRPPPSDRAAEASSARPRTSGTDPCRAAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
SSPAPRPSQPAQPVPGNGSAAMNQSVHPMR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA