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The map label for this gene is yfhC [H]

Identifier: 221635421

GI number: 221635421

Start: 13981

End: 14613

Strand: Reverse

Name: yfhC [H]

Synonym: trd_A0015

Alternate gene names: 221635421

Gene position: 14613-13981 (Counterclockwise)

Preceding gene: 221635422

Following gene: 221635420

Centisome position: 1.59

GC content: 68.25

Gene sequence:

>633_bases
GTGTCGGAGACGACGATCCAGGTGGCTGAAGCGGTCCTCGCGGCCATCCGTAATCGCCGCAGCGTCAAGCAGGTACGGCC
CGATCCGGTGCCGCGCGAGCTGATCGAGCAGCTGCTCGAGGCGGCTGTCTGGGCACCCAATCACCATCTCACGCAACCCT
GGCGCTTCTTCGTCCTCACTGGTGAGGCCCGGGTCGCCTTGGGCGAGGTGCTGGCCCGCGATCCTGCCCTCACACCCGCC
AAGCGGGAGGCGATCCGCCAGAAGCCGCTCCGCGCACCGGTGCTCATCGCGGTCGCTGTCGAGCCCGATCCGGCTCGTCC
CTTGCTGGACGAGTTGGCAGCCGGTGCGGCAGCGATCCAGAACATGCTCCTGGCTGCCCATGCGCTCGGACTCGGTGCCA
TCTGGCGGACCGGCCGGGCGATCGAGGATCCAGCGGTCAAGGAGTTCCTCGGTCTCTCGGATCGAGCAGTTCTGCCGGGT
TTCGTCTATATCGGCTACCCGGCTGCTCTGCCCGAACCACCAGCACGGCGTCCGGCGAGCACGTGCACCGAGTGGATCGA
TGCCGAGCGTGCCGCTGCCGCTCGCGATCGCCTGCTCGCGACGTTGGATCACTCGCCCGCGCGACACGACTGA

Upstream 100 bases:

>100_bases
AACGGGCCTTGCGGGCGACACTGCTGGCCAGCGCTGCCGCTGATCGACTACCCTCGTTCTGGGTGATCGTCTGCTGGCTC
GAGATGACGGGGAGGCGTGC

Downstream 100 bases:

>100_bases
CGACCGCCACGAGAACCAACGCGCGGACCCGGTCTGCGACGCATGCTGTTTCTTCCAAGTTCCACGCGTCTTCCCCCTGT
CCTCTCGCCGACTGGTGACC

Product: NADH dehydrogenase (h(2)o(2)-forming nadh oxidase)(nadh:oxygen oxidoreductase)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSETTIQVAEAVLAAIRNRRSVKQVRPDPVPRELIEQLLEAAVWAPNHHLTQPWRFFVLTGEARVALGEVLARDPALTPA
KREAIRQKPLRAPVLIAVAVEPDPARPLLDELAAGAAAIQNMLLAAHALGLGAIWRTGRAIEDPAVKEFLGLSDRAVLPG
FVYIGYPAALPEPPARRPASTCTEWIDAERAAAARDRLLATLDHSPARHD

Sequences:

>Translated_210_residues
MSETTIQVAEAVLAAIRNRRSVKQVRPDPVPRELIEQLLEAAVWAPNHHLTQPWRFFVLTGEARVALGEVLARDPALTPA
KREAIRQKPLRAPVLIAVAVEPDPARPLLDELAAGAAAIQNMLLAAHALGLGAIWRTGRAIEDPAVKEFLGLSDRAVLPG
FVYIGYPAALPEPPARRPASTCTEWIDAERAAAARDRLLATLDHSPARHD
>Mature_209_residues
SETTIQVAEAVLAAIRNRRSVKQVRPDPVPRELIEQLLEAAVWAPNHHLTQPWRFFVLTGEARVALGEVLARDPALTPAK
REAIRQKPLRAPVLIAVAVEPDPARPLLDELAAGAAAIQNMLLAAHALGLGAIWRTGRAIEDPAVKEFLGLSDRAVLPGF
VYIGYPAALPEPPARRPASTCTEWIDAERAAAARDRLLATLDHSPARHD

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=156, Percent_Identity=35.2564102564103, Blast_Score=94, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 22813; Mature: 22681

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETTIQVAEAVLAAIRNRRSVKQVRPDPVPRELIEQLLEAAVWAPNHHLTQPWRFFVLT
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
GEARVALGEVLARDPALTPAKREAIRQKPLRAPVLIAVAVEPDPARPLLDELAAGAAAIQ
CCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
NMLLAAHALGLGAIWRTGRAIEDPAVKEFLGLSDRAVLPGFVYIGYPAALPEPPARRPAS
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCHH
TCTEWIDAERAAAARDRLLATLDHSPARHD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SETTIQVAEAVLAAIRNRRSVKQVRPDPVPRELIEQLLEAAVWAPNHHLTQPWRFFVLT
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
GEARVALGEVLARDPALTPAKREAIRQKPLRAPVLIAVAVEPDPARPLLDELAAGAAAIQ
CCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
NMLLAAHALGLGAIWRTGRAIEDPAVKEFLGLSDRAVLPGFVYIGYPAALPEPPARRPAS
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCHH
TCTEWIDAERAAAARDRLLATLDHSPARHD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]