Click here to switch to the map view.

The map label for this gene is 221635422

Identifier: 221635422

GI number: 221635422

Start: 14671

End: 14940

Strand: Reverse

Name: 221635422

Synonym: trd_A0016

Alternate gene names: NA

Gene position: 14940-14671 (Counterclockwise)

Preceding gene: 221635423

Following gene: 221635421

Centisome position: 1.63

GC content: 71.11

Gene sequence:

>270_bases
TTGGCTCCCGGCTCGCACCACCTCGCGAACGCCGTCGGCGTCGACCCGCTGCGCATCGTGAGCGGCCCCGGCGAGGAGCG
ACCGCCGCGCGTCCGACGGCTGGCCAGCATGCTTTCGGTTTCCACGCGCCCCTCGGCCGCCGCACAGTGGCCGACCGTGC
GCGCTTTTTCCGTGGATGGTACGAGAGGCCCTGCCGGTGAAACGCTCGTTCGATCCCTGACCATGCAAACGGGCCTTGCG
GGCGACACTGCTGGCCAGCGCTGCCGCTGA

Upstream 100 bases:

>100_bases
CGCTGATCTCGCTGGCGCGGAGCGGATCGCCGCCGTTCACGTCGCCGAAGCGCTCCAGTACCGGCCGCAGGAGGTCGGCT
GATCGCCTGGTCGCAGTACG

Downstream 100 bases:

>100_bases
TCGACTACCCTCGTTCTGGGTGATCGTCTGCTGGCTCGAGATGACGGGGAGGCGTGCGTGTCGGAGACGACGATCCAGGT
GGCTGAAGCGGTCCTCGCGG

Product: LytR/CspA/Psr family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MAPGSHHLANAVGVDPLRIVSGPGEERPPRVRRLASMLSVSTRPSAAAQWPTVRAFSVDGTRGPAGETLVRSLTMQTGLA
GDTAGQRCR

Sequences:

>Translated_89_residues
MAPGSHHLANAVGVDPLRIVSGPGEERPPRVRRLASMLSVSTRPSAAAQWPTVRAFSVDGTRGPAGETLVRSLTMQTGLA
GDTAGQRCR
>Mature_88_residues
APGSHHLANAVGVDPLRIVSGPGEERPPRVRRLASMLSVSTRPSAAAQWPTVRAFSVDGTRGPAGETLVRSLTMQTGLAG
DTAGQRCR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9304; Mature: 9173

Theoretical pI: Translated: 12.07; Mature: 12.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPGSHHLANAVGVDPLRIVSGPGEERPPRVRRLASMLSVSTRPSAAAQWPTVRAFSVDG
CCCCCCCCCHHCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC
TRGPAGETLVRSLTMQTGLAGDTAGQRCR
CCCCCHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
APGSHHLANAVGVDPLRIVSGPGEERPPRVRRLASMLSVSTRPSAAAQWPTVRAFSVDG
CCCCCCCCHHCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC
TRGPAGETLVRSLTMQTGLAGDTAGQRCR
CCCCCHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA