Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635412

Identifier: 221635412

GI number: 221635412

Start: 5959

End: 7323

Strand: Reverse

Name: 221635412

Synonym: trd_A0006

Alternate gene names: NA

Gene position: 7323-5959 (Counterclockwise)

Preceding gene: 221635416

Following gene: 221635411

Centisome position: 0.8

GC content: 65.49

Gene sequence:

>1365_bases
GTGCGAAAGGAGACCTTCGTCCGGACCATGAGCGACCATGACCCGGGTGGACGATCCGTACCCGCTCTCGAGCCGACAGT
CTCCCGTCCGCGGTCCTCTGAGCGGCGGCGTCTCCAGCAGAGCTTCTTCTTCGGCGTGGCTAACGGCGGTTTGCTCCTGC
TCGGCGACGCGCTCATCCACCCCGTTTTGGTCCTCACCGTCTTCGTCTCCCAGTTGACCGAGCGCGGCCTCCTCGTGGGA
CTCGTCCCGGCGATGAGCGTCAGCCTCTGGTTCCTGCCGCAGGCGATCGCGGCCGCGTTCGTCGAGGGGCGTCGCCGCCA
GCTCCCCTGGGCGACCTGGGGAGGGATCGTGCGTGCCCTGGCGATCGCTATCCTGGCCGCGGTCGTGCTCGCTCATGGTG
TTGGCCCGAGCCCGACGCTGCTCACTGTGTTCTTCGTTTGTTATGCGGTCTACAACCTCGCTGCCGGTTTTGCCTTCGTT
CCCTTGGTGGAACTTACTGCTCGTGCTGTACCGCCTGATCGGCGTGGCTTCTTCTTCAGCCAGCGCAATCTGTGGGGCGC
TGTGCTCTCGCTCGCTGCTGGGTTCGCTGTCCAACGGGCACTGGTGTTCGGGGAGGCGGGTTTTGCCGTCCTCTTTGCTG
CCTCGTTTGCTGCGCTTTCCCTCGCGGCCTACACCACGCTCTGGATCGTCGAGCGTCCTGTTCCGCCTCGGCCACGCTCC
TTTGCCTCCTGGGTGGCCGAGCTCCCGCGCCTCCTCGCGCGCCGCCCAGTTCGTCGCTTTCTGGTCTTTCGTTCCCTCCT
CGCCTTGTCCACGATTGCCGACCCCTTCTTCGTCGTGTACGCGCAGCGCGTGCTCGGCCTTCCCGCCGAAACGGTCGGTT
TCTATCTTGCTCTTTCCGCTCTCGCCCGGATCCTCGCCAATCCGCTCTGGGGTTGGGTGGTCCAGCATTGGGGCAACCGT
CAACTCCTCCAGCTGGCGACTCTGGTGCGCGTCTTCATGCCGCTCGTCGCGCTGGGGATTCAACCGATCCTCGGCTGGGA
GCACCTCGTGCCGCGCCTGGACGATCCACAGCAGGTCGTCCTCGTCACCTTCGCCTTTGTTTTTGTCGCCTATGGCGTGA
CGCTCTCGGCACAGATGTTGGCCAACTTCACGGCGGTGCTCGAGCTCGCTCACCCCGAGGAGCGTCCGACACTCGTCGGC
GTCACCAATACGATCCTGGGCGTCGTTGCCCTCGTGCCGATGCTCGGTGGCCTGGTCGTCGATCGCTTTGGCTACTCAGC
GGTTTTCGCGCTCGCGCTCGCGCTTTCCTTGCTCGCGCTGCTGGCCAGCGGTCTCCTGCCAGCGTCCCGTCGCCAGCCAG
CGTGA

Upstream 100 bases:

>100_bases
CCGCTGCCAGCGAACGGCCGCTTTGGTCGTGCTGCCCGCACCCACCTTCCTCGCGCTCGCCCAGTGGGCGAACGTGCGAT
AGGATGAGCGCGGGATCGGT

Downstream 100 bases:

>100_bases
ACACCACTGCGGTACCCCGTGCACCCGACCAGCACGGGTGCGGGACGATCGCCCCTGGCTTCCGATCCAGGCTGGAGGTG
ACATGGGTGCACCGCTCCCG

Product: major facilitator superfamily MFS_1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MRKETFVRTMSDHDPGGRSVPALEPTVSRPRSSERRRLQQSFFFGVANGGLLLLGDALIHPVLVLTVFVSQLTERGLLVG
LVPAMSVSLWFLPQAIAAAFVEGRRRQLPWATWGGIVRALAIAILAAVVLAHGVGPSPTLLTVFFVCYAVYNLAAGFAFV
PLVELTARAVPPDRRGFFFSQRNLWGAVLSLAAGFAVQRALVFGEAGFAVLFAASFAALSLAAYTTLWIVERPVPPRPRS
FASWVAELPRLLARRPVRRFLVFRSLLALSTIADPFFVVYAQRVLGLPAETVGFYLALSALARILANPLWGWVVQHWGNR
QLLQLATLVRVFMPLVALGIQPILGWEHLVPRLDDPQQVVLVTFAFVFVAYGVTLSAQMLANFTAVLELAHPEERPTLVG
VTNTILGVVALVPMLGGLVVDRFGYSAVFALALALSLLALLASGLLPASRRQPA

Sequences:

>Translated_454_residues
MRKETFVRTMSDHDPGGRSVPALEPTVSRPRSSERRRLQQSFFFGVANGGLLLLGDALIHPVLVLTVFVSQLTERGLLVG
LVPAMSVSLWFLPQAIAAAFVEGRRRQLPWATWGGIVRALAIAILAAVVLAHGVGPSPTLLTVFFVCYAVYNLAAGFAFV
PLVELTARAVPPDRRGFFFSQRNLWGAVLSLAAGFAVQRALVFGEAGFAVLFAASFAALSLAAYTTLWIVERPVPPRPRS
FASWVAELPRLLARRPVRRFLVFRSLLALSTIADPFFVVYAQRVLGLPAETVGFYLALSALARILANPLWGWVVQHWGNR
QLLQLATLVRVFMPLVALGIQPILGWEHLVPRLDDPQQVVLVTFAFVFVAYGVTLSAQMLANFTAVLELAHPEERPTLVG
VTNTILGVVALVPMLGGLVVDRFGYSAVFALALALSLLALLASGLLPASRRQPA
>Mature_454_residues
MRKETFVRTMSDHDPGGRSVPALEPTVSRPRSSERRRLQQSFFFGVANGGLLLLGDALIHPVLVLTVFVSQLTERGLLVG
LVPAMSVSLWFLPQAIAAAFVEGRRRQLPWATWGGIVRALAIAILAAVVLAHGVGPSPTLLTVFFVCYAVYNLAAGFAFV
PLVELTARAVPPDRRGFFFSQRNLWGAVLSLAAGFAVQRALVFGEAGFAVLFAASFAALSLAAYTTLWIVERPVPPRPRS
FASWVAELPRLLARRPVRRFLVFRSLLALSTIADPFFVVYAQRVLGLPAETVGFYLALSALARILANPLWGWVVQHWGNR
QLLQLATLVRVFMPLVALGIQPILGWEHLVPRLDDPQQVVLVTFAFVFVAYGVTLSAQMLANFTAVLELAHPEERPTLVG
VTNTILGVVALVPMLGGLVVDRFGYSAVFALALALSLLALLASGLLPASRRQPA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49299; Mature: 49299

Theoretical pI: Translated: 11.73; Mature: 11.73

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKETFVRTMSDHDPGGRSVPALEPTVSRPRSSERRRLQQSFFFGVANGGLLLLGDALIH
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHH
PVLVLTVFVSQLTERGLLVGLVPAMSVSLWFLPQAIAAAFVEGRRRQLPWATWGGIVRAL
HHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AIAILAAVVLAHGVGPSPTLLTVFFVCYAVYNLAAGFAFVPLVELTARAVPPDRRGFFFS
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEH
QRNLWGAVLSLAAGFAVQRALVFGEAGFAVLFAASFAALSLAAYTTLWIVERPVPPRPRS
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHH
FASWVAELPRLLARRPVRRFLVFRSLLALSTIADPFFVVYAQRVLGLPAETVGFYLALSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHH
LARILANPLWGWVVQHWGNRQLLQLATLVRVFMPLVALGIQPILGWEHLVPRLDDPQQVV
HHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHCCCCCCHHHHH
LVTFAFVFVAYGVTLSAQMLANFTAVLELAHPEERPTLVGVTNTILGVVALVPMLGGLVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
DRFGYSAVFALALALSLLALLASGLLPASRRQPA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRKETFVRTMSDHDPGGRSVPALEPTVSRPRSSERRRLQQSFFFGVANGGLLLLGDALIH
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHH
PVLVLTVFVSQLTERGLLVGLVPAMSVSLWFLPQAIAAAFVEGRRRQLPWATWGGIVRAL
HHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AIAILAAVVLAHGVGPSPTLLTVFFVCYAVYNLAAGFAFVPLVELTARAVPPDRRGFFFS
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEH
QRNLWGAVLSLAAGFAVQRALVFGEAGFAVLFAASFAALSLAAYTTLWIVERPVPPRPRS
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHH
FASWVAELPRLLARRPVRRFLVFRSLLALSTIADPFFVVYAQRVLGLPAETVGFYLALSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHH
LARILANPLWGWVVQHWGNRQLLQLATLVRVFMPLVALGIQPILGWEHLVPRLDDPQQVV
HHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHCCCCCCHHHHH
LVTFAFVFVAYGVTLSAQMLANFTAVLELAHPEERPTLVGVTNTILGVVALVPMLGGLVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
DRFGYSAVFALALALSLLALLASGLLPASRRQPA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA